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Symposium: What Does the Microbiome Tell Us about Prevention and Treatment of AD/ADRD?
Published in:
Journal of Neuroscience, 2024, v. 44, n. 41, p. 1, doi. 10.1523/JNEUROSCI.1295-24.2024
By:
- Capocchi, Joia K.;
- Figueroa-Romero, Claudia;
- Dunham, Sage J. B.;
- Faraci, Gina;
- Rothman, Jason A.;
- Whiteson, Katrine L.;
- Seo, Dong-oh;
- Holtzman, David M.;
- Grabrucker, Stefanie;
- Nolan, Yvonne M.;
- Kaddurah-Daouk, Rima;
- Jett, David A.
Publication type:
Article
Sex‐specific associations between AD genotype and the microbiome of human amyloid beta knock‐in (hAβ‐KI) mice.
Published in:
Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2024, v. 20, n. 7, p. 4935, doi. 10.1002/alz.13794
By:
- Dunham, Sage J. B.;
- Avelar‐Barragan, Julio;
- Rothman, Jason A.;
- Adams, Eric D.;
- Faraci, Gina;
- Forner, Stefania;
- Kawauchi, Shimako;
- Tenner, Andrea J.;
- Green, Kim N.;
- LaFerla, Frank M.;
- MacGregor, Grant R.;
- Mapstone, Mark;
- Whiteson, Katrine L.
Publication type:
Article
The cure from within? a review of the microbiome and diet in melanoma.
Published in:
Cancer & Metastasis Reviews, 2022, v. 41, n. 2, p. 261, doi. 10.1007/s10555-022-10029-3
By:
- Kumar, Priyanka;
- Brazel, Danielle;
- DeRogatis, Julia;
- Valerin, Jennifer B. Goldstein;
- Whiteson, Katrine;
- Chow, Warren A.;
- Tinoco, Roberto;
- Moyers, Justin T.
Publication type:
Article
A Winogradsky-based culture system shows an association between microbial fermentation and cystic fibrosis exacerbation.
Published in:
ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2015, v. 9, n. 4, p. 1052, doi. 10.1038/ismej.2014.266
By:
- Quinn, Robert A;
- Whiteson, Katrine;
- Lim, Yan-Wei;
- Salamon, Peter;
- Bailey, Barbara;
- Mienardi, Simone;
- Sanchez, Savannah E;
- Blake, Don;
- Conrad, Doug;
- Rohwer, Forest
Publication type:
Article
A Winogradsky-based culture system shows an association between microbial fermentation and cystic fibrosis exacerbation.
Published in:
ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2015, v. 9, n. 4, p. 1024, doi. 10.1038/ismej.2014.234
By:
- Quinn, Robert A;
- Whiteson, Katrine;
- Lim, Yan-Wei;
- Salamon, Peter;
- Bailey, Barbara;
- Mienardi, Simone;
- Sanchez, Savannah E;
- Blake, Don;
- Conrad, Doug;
- Rohwer, Forest
Publication type:
Article
Breath gas metabolites and bacterial metagenomes from cystic fibrosis airways indicate active pH neutral 2,3-butanedione fermentation.
Published in:
ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2014, v. 8, n. 6, p. 1247, doi. 10.1038/ismej.2013.229
By:
- Whiteson, Katrine L;
- Meinardi, Simone;
- Lim, Yan Wei;
- Schmieder, Robert;
- Maughan, Heather;
- Quinn, Robert;
- Blake, Donald R;
- Conrad, Douglas;
- Rohwer, Forest
Publication type:
Article
Mechanistic Model of <i>Rothia mucilaginosa</i> Adaptation toward Persistence in the CF Lung, Based on a Genome Reconstructed from Metagenomic Data
Published in:
PLoS ONE, 2013, v. 8, n. 5, p. 1, doi. 10.1371/journal.pone.0064285
By:
- Lim, Yan Wei;
- Schmieder, Robert;
- Haynes, Matthew;
- Furlan, Mike;
- Matthews, T. David;
- Whiteson, Katrine;
- Poole, Stephen J.;
- Hayes, Christopher S.;
- Low, David A.;
- Maughan, Heather;
- Edwards, Robert;
- Conrad, Douglas;
- Rohwer, Forest
Publication type:
Article
Influence of complement protein C1q or complement receptor C5aR1 on gut microbiota composition in wildtype and Alzheimer's mouse models.
Published in:
Journal of Neuroinflammation, 2023, v. 20, n. 1, p. 1, doi. 10.1186/s12974-023-02885-9
By:
- Petrisko, Tiffany J.;
- Gargus, Matthew;
- Chu, Shu-Hui;
- Selvan, Purnika;
- Whiteson, Katrine L.;
- Tenner, Andrea J.
Publication type:
Article
The great divide: rhamnolipids mediate separation between P. aeruginosa and S. aureus.
Published in:
Frontiers in Cellular & Infection Microbiology, 2023, p. 1, doi. 10.3389/fcimb.2023.1245874
By:
- Bru, Jean-Louis;
- Kasallis, Summer J.;
- Chang, Rendell;
- Zhuo, Quantum;
- Nguyen, Jacqueline;
- Pham, Phillip;
- Warren, Elizabeth;
- Whiteson, Katrine;
- Høyland-Kroghsbo, Nina Molin;
- Limoli, Dominique H.;
- Siryaporn, Albert
Publication type:
Article
Integrating Virus Monitoring Strategies for Safe Non-Potable Water Reuse.
Published in:
Water (20734441), 2022, v. 14, n. 8, p. 1187, doi. 10.3390/w14081187
By:
- Jiang, Sunny C.;
- Bischel, Heather N.;
- Goel, Ramesh;
- Rosso, Diego;
- Sherchan, Samendra P.;
- Whiteson, Katrine L.;
- Yan, Tao;
- Solo-Gabriele, Helena M.
Publication type:
Article
Identificación de nuevas partículas virales a partir de metagenomas virales intestinales y modelos en ratón.
Published in:
Biomédica: Revista del Instituto Nacional de Salud, 2015, v. 35, p. 49
By:
- Leonardo Moreno, Jaime;
- Boiling, Lance;
- Whiteson, Katrine;
- Heath, Andrew;
- Rohwer, Forest;
- Gordon, Jeffrey I.;
- Reyes, Alejandro
Publication type:
Article
The Upper Respiratory Tract as a Microbial Source for Pulmonary Infections in Cystic Fibrosis.
Published in:
American Journal of Respiratory & Critical Care Medicine, 2014, v. 189, n. 11, p. 1309, doi. 10.1164/rccm.201312-2129PP
By:
- Whiteson, Katrine L.;
- Bailey, Barbara;
- Bergkessel, Megan;
- Conrad, Douglas;
- Delhaes, Laurence;
- Felts, Ben;
- Harris, J. Kirk;
- Hunter, Ryan;
- Yan Wei Lim;
- Maughan, Heather;
- Quinn, Robert;
- Salamon, Peter;
- Sullivan, James;
- Wagner, Brandie D.;
- Rainey, Paul B.
Publication type:
Article
Distinct colon mucosa microbiomes associated with tubular adenomas and serrated polyps.
Published in:
NPJ Biofilms & Microbiomes, 2022, v. 8, n. 1, p. 1, doi. 10.1038/s41522-022-00328-6
By:
- Avelar-Barragan, Julio;
- DeDecker, Lauren;
- Lu, Zachary N.;
- Coppedge, Bretton;
- Karnes, William E.;
- Whiteson, Katrine L.
Publication type:
Article
Editorial: Virus Discovery by Metagenomics: The (Im)possibilities.
Published in:
Frontiers in Microbiology, 2017, p. 1, doi. 10.3389/fmicb.2017.01710
By:
- Dutilh, Bas E.;
- Reyes, Alejandro;
- Hall, Richard J.;
- Whiteson, Katrine L.
Publication type:
Article
A Retrospective, Observational Study of 12 Cases of Expanded-Access Customized Phage Therapy: Production, Characteristics, and Clinical Outcomes.
Published in:
Clinical Infectious Diseases, 2023, v. 77, n. 8, p. 1079, doi. 10.1093/cid/ciad335
By:
- Green, Sabrina I;
- Clark, Justin R;
- Santos, Haroldo H;
- Weesner, Kyle E;
- Salazar, Keiko C;
- Aslam, Saima;
- Campbell, J William;
- Doernberg, Sarah B;
- Blodget, Emily;
- Morris, Michele I;
- Suh, Gina A;
- Obeid, Karam;
- Silveira, Fernanda P;
- Filippov, Andrey A;
- Whiteson, Katrine L;
- Trautner, Barbara W;
- Terwilliger, Austen L;
- Maresso, Anthony
Publication type:
Article
Going viral: next-generation sequencing applied to phage populations in the human gut.
Published in:
Nature Reviews Microbiology, 2012, v. 10, n. 9, p. 607, doi. 10.1038/nrmicro2853
By:
- Reyes, Alejandro;
- Semenkovich, Nicholas P.;
- Whiteson, Katrine;
- Rohwer, Forest;
- Gordon, Jeffrey I.
Publication type:
Article
Thriving Under Stress: Pseudomonas aeruginosa Outcompetes the Background Polymicrobial Community Under Treatment Conditions in a Novel Chronic Wound Model.
Published in:
Frontiers in Cellular & Infection Microbiology, 2020, v. 10, p. N.PAG, doi. 10.3389/fcimb.2020.569685
By:
- Phan, Joann;
- Ranjbar, Saba;
- Kagawa, Miki;
- Gargus, Matthew;
- Hochbaum, Allon Israel;
- Whiteson, Katrine L.
Publication type:
Article
Longitudinal Associations of the Cystic Fibrosis Airway Microbiome and Volatile Metabolites: A Case Study.
Published in:
Frontiers in Cellular & Infection Microbiology, 2020, v. 10, p. 1, doi. 10.3389/fcimb.2020.00174
By:
- Hahn, Andrea;
- Whiteson, Katrine;
- Davis, Trenton J.;
- Phan, Joann;
- Sami, Iman;
- Koumbourlis, Anastassios C.;
- Freishtat, Robert J.;
- Crandall, Keith A.;
- Bean, Heather D.
Publication type:
Article
Noma Affected Children from Niger Have Distinct Oral Microbial Communities Based on High-Throughput Sequencing of 16S rRNA Gene Fragments.
Published in:
PLoS Neglected Tropical Diseases, 2014, v. 8, n. 12, p. 1, doi. 10.1371/journal.pntd.0003240
By:
- Whiteson, Katrine L.;
- Lazarevic, Vladimir;
- Tangomo-Bento, Manuela;
- Girard, Myriam;
- Maughan, Heather;
- Pittet, Didier;
- Francois, Patrice;
- Schrenzel, Jacques
Publication type:
Article
Noma Affected Children from Niger Have Distinct Oral Microbial Communities Based on High-Throughput Sequencing of 16S rRNA Gene Fragments.
Published in:
PLoS Neglected Tropical Diseases, 2014, v. 8, n. 12, p. 1, doi. 10.1371/journal.pntd.0003240
By:
- Whiteson, Katrine L.;
- Lazarevic, Vladimir;
- Tangomo-Bento, Manuela;
- Girard, Myriam;
- Maughan, Heather;
- Pittet, Didier;
- Francois, Patrice;
- Schrenzel, Jacques;
- null, null
Publication type:
Article
Bacterial Diversity in Oral Samples of Children in Niger with Acute Noma, Acute Necrotizing Gingivitis, and Healthy Controls.
Published in:
PLoS Neglected Tropical Diseases, 2012, v. 6, n. 3, p. 1, doi. 10.1371/journal.pntd.0001556
By:
- Bolivar, Ignacio;
- Whiteson, Katrine;
- Stadelmann, Benoît;
- Baratti-Mayer, Denise;
- Gizard, Yann;
- Mombelli, Andrea;
- Pittet, Didier;
- Schrenzel, Jacques
Publication type:
Article
Bacterial Diversity in Oral Samples of Children in Niger with Acute Noma, Acute Necrotizing Gingivitis, and Healthy Controls.
Published in:
PLoS Neglected Tropical Diseases, 2012, v. 6, n. 3, p. 1
By:
- Bolivar, Ignacio;
- Whiteson, Katrine;
- Stadelmann, Benoît;
- Baratti-Mayer, Denise;
- Gizard, Yann;
- Mombelli, Andrea;
- Pittet, Didier;
- Schrenzel, Jacques;
- Baratti-, D.;
- Bolivar, I.;
- Bornand, J.-.E;
- Gayet-Ageron, A.;
- Gervaix, A.;
- Jaquinet, A.;
- Hugonnet, S.;
- Mombelli, A.;
- Montandon, D.;
- Pittet, B.;
- Pittet, D.;
- Rusconi, M.
Publication type:
Article
Maturation of the infant rhesus macaque gut microbiome and its role in the development of diarrheal disease.
Published in:
Genome Biology, 2019, v. 20, n. 1, p. N.PAG, doi. 10.1186/s13059-019-1789-x
By:
- Rhoades, Nicholas;
- Barr, Tasha;
- Hendrickson, Sara;
- Prongay, Kamm;
- Haertel, Andrew;
- Gill, Leanne;
- Garzel, Laura;
- Whiteson, Katrine;
- Slifka, Mark;
- Messaoudi, Ilhem
Publication type:
Article
A genomic perspective on a new bacterial genus and species from the Alcaligenaceae family, Basilea psittacipulmonis.
Published in:
BMC Genomics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2164-15-169
By:
- Whiteson, Katrine L.;
- Hernandez, David;
- Lazarevic, Vladimir;
- Gaia, Nadia;
- Farinelli, Laurent;
- François, Patrice;
- Pilo, Paola;
- Frey, Joachim;
- Schrenzel, Jacques
Publication type:
Article
Study of inter- and intra-individual variations in the salivary microbiota.
Published in:
BMC Genomics, 2010, v. 11, p. 523, doi. 10.1186/1471-2164-11-523
By:
- Lazarevic, Vladimir;
- Whiteson, Katrine;
- Hernandez, David;
- François, Patrice;
- Schrenzel, Jacques
Publication type:
Article
Longitudinal Sequencing and Variant Detection of SARS-CoV-2 across Southern California Wastewater.
Published in:
Applied Microbiology (2673-8007), 2024, v. 4, n. 2, p. 635, doi. 10.3390/applmicrobiol4020044
By:
- Rothman, Jason A.;
- Saghir, Andrew;
- Zimmer-Faust, Amity G.;
- Langlois, Kylie;
- Raygoza, Kayla;
- Steele, Joshua A.;
- Griffith, John F.;
- Whiteson, Katrine L.
Publication type:
Article
Predictable Molecular Adaptation of Coevolving Enterococcus faecium and Lytic Phage EfV12-phi1.
Published in:
Frontiers in Microbiology, 2019, p. N.PAG, doi. 10.3389/fmicb.2018.03192
By:
- Wandro, Stephen;
- Oliver, Andrew;
- Gallagher, Tara;
- Weihe, Claudia;
- England, Whitney;
- Martiny, Jennifer B. H.;
- Whiteson, Katrine
Publication type:
Article
Correction: Gut microbiome in endometriosis: a cohort study on 1000 individuals.
Published in:
2024
By:
- Pérez-Prieto, Inmaculada;
- Vargas, Eva;
- Salas-Espejo, Eduardo;
- Lüll, Kreete;
- Canha-Gouveia, Analuce;
- Pérez, Laura Antequera;
- Fontes, Juan;
- Salumets, Andres;
- Andreson, Reidar;
- Aasmets, Oliver;
- Whiteson, Katrine;
- Org, Elin;
- Altmäe, Signe
Publication type:
Correction Notice
Gut microbiome in endometriosis: a cohort study on 1000 individuals.
Published in:
BMC Medicine, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12916-024-03503-y
By:
- Pérez-Prieto, Inmaculada;
- Vargas, Eva;
- Salas-Espejo, Eduardo;
- Lüll, Kreete;
- Canha-Gouveia, Analuce;
- Pérez, Laura Antequera;
- Fontes, Juan;
- Salumets, Andres;
- Andreson, Reidar;
- Aasmets, Oliver;
- Mait, Metspalu;
- Andres, Metspalu;
- Lili, Milani;
- Tõnu, Esko;
- Whiteson, Katrine;
- Org, Elin;
- Altmäe, Signe
Publication type:
Article

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