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Disease pathways at the Rat Genome Database Pathway Portal: Genes in context - a network approach to understanding the molecular mechanisms of disease.
Published in:
Human Genomics, 2014, v. 8, n. 1, p. 1, doi. 10.1186/s40246-014-0017-8
By:
- Petri, Victoria;
- Hayman, G. Thomas;
- Tutaj, Marek;
- Smith, Jennifer R.;
- Laulederkind, Stanley J. F.;
- Shur-Jen Wang;
- Nigam, Rajni;
- De Pons, Jeff;
- Shimoyama, Mary;
- Dwinell, Melinda R.;
- Worthey, Elizabeth A.;
- Jacob, Howard J.
Publication type:
Article
The updated RGD Pathway Portal utilizes increased curation efficiency and provides expanded pathway information.
Published in:
Human Genomics, 2013, v. 7, p. 1, doi. 10.1186/1479-7364-7-4
By:
- Hayman, G. Thomas;
- Jayaraman, Pushkala;
- Petri, Victoria;
- Tutaj, Marek;
- Weisong Liu;
- De Pons, Jeff;
- Dwinell, Melinda R.;
- Shimoyama, Mary
Publication type:
Article
The Rat Genome Database 2015: genomic, phenotypic and environmental variations and disease.
Published in:
Nucleic Acids Research, 2015, v. 43, n. D1, p. D743, doi. 10.1093/nar/gku1026
By:
- Shimoyama, Mary;
- De Pons, Jeff;
- Hayman, G. Thomas;
- Laulederkind, Stanley J.F.;
- Liu, Weisong;
- Nigam, Rajni;
- Petri, Victoria;
- Smith, Jennifer R.;
- Tutaj, Marek;
- Wang, Shur-Jen;
- Worthey, Elizabeth;
- Dwinell, Melinda;
- Jacob, Howard
Publication type:
Article
The pathway ontology - updates and applications.
Published in:
Journal of Biomedical Semantics, 2014, v. 5, n. 1, p. 1, doi. 10.1186/2041-1480-5-7
By:
- Petri, Victoria;
- Jayaraman, Pushkala;
- Tutaj, Marek;
- Thomas Hayman, G.;
- Smith, Jennifer R.;
- Pons, Jeff De;
- Laulederkind, Stanley J. F.;
- Lowry, Timothy F.;
- Nigam, Rajni;
- Shur-Jen Wang;
- Shimoyama, Mary;
- Dwinell, Melinda R.;
- Munzenmaier, Diane H.;
- Worthey, Elizabeth A.;
- Jacob, Howard J.
Publication type:
Article
The clinical measurement, measurement method and experimental condition ontologies: expansion, improvements and new applications.
Published in:
Journal of Biomedical Semantics, 2013, v. 4, n. 1, p. 1, doi. 10.1186/2041-1480-4-26
By:
- Smith, Jennifer R.;
- Park, Carissa A.;
- Nigam, Rajni;
- Laulederkind, Stanley J. F.;
- Thomas Hayman, G.;
- Shur-Jen Wang;
- Lowry, Timothy F.;
- Petri, Victoria;
- Pons, Jeff De;
- Tutaj, Marek;
- Weisong Liu;
- Worthey, Elizabeth A.;
- Shimoyama, Mary;
- Dwinell, Melinda R.
Publication type:
Article
Integrated curation and data mining for disease and phenotype models at the Rat Genome Database.
Published in:
Database: The Journal of Biological Databases & Curation, 2019, v. 2019, p. N.PAG, doi. 10.1093/database/baz014
By:
- Wang, Shur-Jen;
- Laulederkind, Stanley J F;
- Zhao, Yiqing;
- Hayman, G Thomas;
- Smith, Jennifer R;
- Tutaj, Monika;
- Thota, Jyothi;
- Tutaj, Marek A;
- Hoffman, Matthew J;
- Bolton, Elizabeth R;
- Pons, Jeffrey De;
- Dwinell, Melinda R;
- Shimoyama, Mary
Publication type:
Article
The Chinchilla Research Resource Database: resource for an otolaryngology disease model.
Published in:
Database: The Journal of Biological Databases & Curation, 2016, v. 2016, p. 1, doi. 10.1093/database/baw073
By:
- Shimoyama, Mary;
- Smith, Jennifer R.;
- De Pons, Jeff;
- Tutaj, Marek;
- Khampang, Pawjai;
- Wenzhou Hong;
- Erbe, Christy B.;
- Ehrlich, Garth D.;
- Bakaletz, Lauren O.;
- Kerschner, Joseph E.
Publication type:
Article
The Disease Portals, disease-gene annotation and the RGD disease ontology at the Rat Genome Database.
Published in:
Database: The Journal of Biological Databases & Curation, 2016, v. 2016, p. 1, doi. 10.1093/database/baw034
By:
- Hayman, G. Thomas;
- Laulederkind, Stanley J. F.;
- Smith, Jennifer R.;
- Shur-Jen Wang;
- Petri, Victoria;
- Nigam, Rajni;
- Tutaj, Marek;
- De Pons, Jeff;
- Dwinell, Melinda R.;
- Shimoyama, Mary
Publication type:
Article
Ontology searching and browsing at the Rat Genome Database.
Published in:
Database: The Journal of Biological Databases & Curation, 2012, v. 2012, p. 1
By:
- Laulederkind, Stanley J. F.;
- Tutaj, Marek;
- Shimoyama, Mary;
- Hayman, G. Thomas;
- Lowry, Timothy F.;
- Nigam, Rajni;
- Petri, Victoria;
- Smith, Jennifer R.;
- Wang, Shur-Jen;
- de Pons, Jeff;
- Dwinell, Melinda R.;
- Jacob, Howard J.
Publication type:
Article
The Rat Genome Database Pathway Portal.
Published in:
Database: The Journal of Biological Databases & Curation, 2011, v. 2011, n. 10, p. 1
By:
- Petri, Victoria;
- Shimoyama, Mary;
- Hayman, G. Thomas;
- Smith, Jennifer R.;
- Tutaj, Marek;
- de Pons, Jeff;
- Dwinell, Melinda R.;
- Munzenmaier, Diane H.;
- Twigger, Simon N.;
- Jacob, Howard J.
Publication type:
Article
The phenotypic impact of the male-specific region of chromosome-Y in inbred mating: the role of genetic variants and gene duplications in multiple inbred rat strains.
Published in:
Biology of Sex Differences, 2016, v. 7, p. 1, doi. 10.1186/s13293-016-0064-z
By:
- Prokop, Jeremy W.;
- Tsaih, Shirng-Wern;
- Faber, Allison B.;
- Boehme, Shannon;
- Underwood, Adam C.;
- Troyer, Samuel;
- Playl, Lauren;
- Milsted, Amy;
- Turner, Monte E.;
- Ely, Daniel;
- Martins, Almir S.;
- Tutaj, Marek;
- Lazar, Jozef;
- Dwinell, Melinda R.;
- Jacob, Howard J.
Publication type:
Article
Rare disease research resources at the Rat Genome Database.
Published in:
Genetics, 2023, v. 224, n. 4, p. 1, doi. 10.1093/genetics/iyad078
By:
- Kaldunski, Mary L.;
- Smith, Jennifer R.;
- Brodie, Kent C.;
- De Pons, Jeffrey L.;
- Demos, Wendy M.;
- Gibson, Adam C.;
- Hayman, G. Thomas;
- Lamers, Logan;
- Laulederkind, Stanley J. F.;
- Thorat, Ketaki;
- Thota, Jyothi;
- Tutaj, Marek A.;
- Tutaj, Monika;
- Vedi, Mahima;
- Wang, Shur-Jen;
- Zacher, Stacy;
- Dwinell, Melinda R.;
- Kwitek, Anne E.
Publication type:
Article
2022 updates to the Rat Genome Database: a Findable, Accessible, Interoperable, and Reusable (FAIR) resource.
Published in:
Genetics, 2023, v. 224, n. 1, p. 1, doi. 10.1093/genetics/iyad042
By:
- Vedi, Mahima;
- Smith, Jennifer R.;
- Hayman, G. Thomas;
- Tutaj, Monika;
- Brodie, Kent C.;
- De Pons, Jeffrey L.;
- Demos, Wendy M.;
- Gibson, Adam C.;
- Kaldunski, Mary L.;
- Lamers, Logan;
- Laulederkind, Stanley J. F.;
- Thota, Jyothi;
- Thorat, Ketaki;
- Tutaj, Marek A.;
- Wang, Shur-Jen;
- Zacher, Stacy;
- Dwinell, Melinda R.;
- Kwitek, Anne E.
Publication type:
Article
MOET: a web-based gene set enrichment tool at the Rat Genome Database for multiontology and multispecies analyses.
Published in:
Genetics, 2022, v. 220, n. 4, p. 1, doi. 10.1093/genetics/iyac005
By:
- Vedi, Mahima;
- Nalabolu, Harika S.;
- Chien-Wei Lin;
- Hoffman, Matthew J.;
- Smith, Jennifer R.;
- Brodie, Kent;
- De Pons, Jeffrey L.;
- Demos, Wendy M.;
- Gibson, Adam C.;
- Hayman, G. Thomas;
- Hill, Morgan L.;
- Kaldunski, Mary L.;
- Lamers, Logan;
- Laulederkind, Stanley J. F.;
- Thorat, Ketaki;
- Thota, Jyothi;
- Tutaj, Monika;
- Tutaj, Marek A.;
- Shur-Jen Wang;
- Zacher, Stacy
Publication type:
Article
The Year of the Rat: The Rat Genome Database at 20: a multi-species knowledgebase and analysis platform.
Published in:
Nucleic Acids Research, 2020, v. 48, n. D1, p. D731, doi. 10.1093/nar/gkz1041
By:
- Smith, Jennifer R;
- Hayman, G Thomas;
- Wang, Shur-Jen;
- Laulederkind, Stanley J F;
- Hoffman, Matthew J;
- Kaldunski, Mary L;
- Tutaj, Monika;
- Thota, Jyothi;
- Nalabolu, Harika S;
- Ellanki, Santoshi L R;
- Tutaj, Marek A;
- De Pons, Jeffrey L;
- Kwitek, Anne E;
- Dwinell, Melinda R;
- Shimoyama, Mary E
Publication type:
Article
The Rat Genome Database: Genetic, Genomic, and Phenotypic Data Across Multiple Species.
Published in:
Current Protocols, 2023, v. 3, n. 6, p. 1, doi. 10.1002/cpz1.804
By:
- Laulederkind, Stanley J. F.;
- Hayman, G. Thomas;
- Wang, Shur‐Jen;
- Kaldunski, Mary L.;
- Vedi, Mahima;
- Demos, Wendy M.;
- Tutaj, Monika;
- Smith, Jennifer R.;
- Lamers, Logan;
- Gibson, Adam C.;
- Thorat, Ketaki;
- Thota, Jyothi;
- Tutaj, Marek A.;
- de Pons, Jeffrey L.;
- Dwinell, Melinda R.;
- Kwitek, Anne E.
Publication type:
Article
Ontological Analysis of Coronavirus Associated Human Genes at the COVID-19 Disease Portal.
Published in:
Genes, 2022, v. 13, n. 12, p. 2304, doi. 10.3390/genes13122304
By:
- Wang, Shur-Jen;
- Brodie, Kent C.;
- De Pons, Jeffrey L.;
- Demos, Wendy M.;
- Gibson, Adam C.;
- Hayman, G. Thomas;
- Hill, Morgan L.;
- Kaldunski, Mary L.;
- Lamers, Logan;
- Laulederkind, Stanley J. F.;
- Nalabolu, Harika S.;
- Thota, Jyothi;
- Thorat, Ketaki;
- Tutaj, Marek A.;
- Tutaj, Monika;
- Vedi, Mahima;
- Zacher, Stacy;
- Smith, Jennifer R.;
- Dwinell, Melinda R.;
- Kwitek, Anne E.
Publication type:
Article

Found: 17