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Author Correction: Identifying antibiotics based on structural differences in the conserved allostery from mitochondrial heme-copper oxidases.
Published in:
2022
By:
- Nishida, Yuya;
- Yanagisawa, Sachiko;
- Morita, Rikuri;
- Shigematsu, Hideki;
- Shinzawa-Itoh, Kyoko;
- Yuki, Hitomi;
- Ogasawara, Satoshi;
- Shimuta, Ken;
- Iwamoto, Takashi;
- Nakabayashi, Chisa;
- Matsumura, Waka;
- Kato, Hisakazu;
- Gopalasingam, Chai;
- Nagao, Takemasa;
- Qaqorh, Tasneem;
- Takahashi, Yusuke;
- Yamazaki, Satoru;
- Kamiya, Katsumasa;
- Harada, Ryuhei;
- Mizuno, Nobuhiro
Publication type:
Correction Notice
rs10924104 in the expression enhancer motif of CD58 confers susceptibility to human autoimmune diseases.
Published in:
Human Genetics, 2024, v. 143, n. 1, p. 19, doi. 10.1007/s00439-023-02617-2
By:
- Hitomi, Yuki;
- Ueno, Kazuko;
- Aiba, Yoshihiro;
- Nishida, Nao;
- Kawai, Yosuke;
- Kawashima, Minae;
- Khor, Seik-Soon;
- Takada, Sanami;
- Iwabuchi, Chisato;
- Nagasaki, Masao;
- Tokunaga, Katsushi;
- Nakamura, Minoru
Publication type:
Article
Disease susceptibility genes shared by primary biliary cirrhosis and Crohn's disease in the Japanese population.
Published in:
Journal of Human Genetics, 2015, v. 60, n. 9, p. 525, doi. 10.1038/jhg.2015.59
By:
- Aiba, Yoshihiro;
- Yamazaki, Keiko;
- Nishida, Nao;
- Kawashima, Minae;
- Hitomi, Yuki;
- Nakamura, Hitomi;
- Komori, Atsumasa;
- Fuyuno, Yuta;
- Takahashi, Atsushi;
- Kawaguchi, Takaaki;
- Takazoe, Masakazu;
- Suzuki, Yasuo;
- Motoya, Satoshi;
- Matsui, Toshiyuki;
- Esaki, Motohiro;
- Matsumoto, Takayuki;
- Kubo, Michiaki;
- Tokunaga, Katsushi;
- Nakamura, Minoru
Publication type:
Article
De novo mutations in ATP1A3 cause alternating hemiplegia of childhood.
Published in:
Nature Genetics, 2012, v. 44, n. 9, p. 1030, doi. 10.1038/ng.2358
By:
- Heinzen, Erin L;
- Swoboda, Kathryn J;
- Hitomi, Yuki;
- Gurrieri, Fiorella;
- Nicole, Sophie;
- de Vries, Boukje;
- Tiziano, F Danilo;
- Fontaine, Bertrand;
- Walley, Nicole M;
- Heavin, Sinéad;
- Panagiotakaki, Eleni;
- Neri, Giovanni;
- Koelewijn, Stephany;
- Kamphorst, Jessica;
- Geilenkirchen, Marije;
- Pelzer, Nadine;
- Laan, Laura;
- Haan, Joost;
- Ferrari, Michel;
- van den Maagdenberg, Arn
Publication type:
Article
Human CD72 splicing isoform responsible for resistance to systemic lupus erythematosus regulates serum immunoglobulin level and is localized in endoplasmic reticulum.
Published in:
BMC Immunology, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2172-13-72
By:
- Hitomi, Yuki;
- Adachi, Takahiro;
- Tsuchiya, Naoyuki;
- Honda, Zen-Ichiro;
- Tokunaga, Katsushi;
- Tsubata, Takeshi
Publication type:
Article
Fine-mapping analysis revealed complex pleiotropic effect and tissue-specific regulatory mechanism of TNFSF15 in primary biliary cholangitis, Crohn's disease and leprosy.
Published in:
Scientific Reports, 2016, p. 31429, doi. 10.1038/srep31429
By:
- Sun, Yonghu;
- Irwanto, Astrid;
- Toyo-oka, Licht;
- Hong, Myunghee;
- Liu, Hong;
- Andiappan, Anand Kumar;
- Choi, Hyunchul;
- Hitomi, Yuki;
- Yu, Gongqi;
- Yu, Yongxiang;
- Bao, Fangfang;
- Wang, Chuan;
- Fu, Xian;
- Yue, Zhenhua;
- Wang, Honglei;
- Zhang, Huimin;
- Kawashima, Minae;
- Kojima, Kaname;
- Nagasaki, Masao;
- Nakamura, Minoru
Publication type:
Article
Human primary biliary cirrhosis-susceptible allele of rs4979462 enhances TNFSF15 expression by binding NF-1.
Published in:
Human Genetics, 2015, v. 134, n. 7, p. 737, doi. 10.1007/s00439-015-1556-3
By:
- Hitomi, Yuki;
- Kawashima, Minae;
- Aiba, Yoshihiro;
- Nishida, Nao;
- Matsuhashi, Mika;
- Okazaki, Hitoshi;
- Nakamura, Minoru;
- Tokunaga, Katsushi
Publication type:
Article
Mapping of susceptible variants for cold medicine-related Stevens–Johnson syndrome by whole-genome resequencing.
Published in:
NPJ Genomic Medicine, 2021, v. 6, n. 1, p. 1, doi. 10.1038/s41525-021-00171-2
By:
- Kawai, Yosuke;
- Hitomi, Yuki;
- Ueta, Mayumi;
- Khor, Seik-Soon;
- Nakatani, Ken;
- Sotozono, Chie;
- Kinoshita, Shigeru;
- Nagasaki, Masao;
- Tokunaga, Katsushi
Publication type:
Article
The ubiquinone synthesis pathway is a promising drug target for Chagas disease.
Published in:
PLoS ONE, 2021, v. 16, n. 2, p. 1, doi. 10.1371/journal.pone.0243855
By:
- Nara, Takeshi;
- Nakagawa, Yukari;
- Tsuganezawa, Keiko;
- Yuki, Hitomi;
- Sekimata, Katsuhiko;
- Koyama, Hiroo;
- Ogawa, Naoko;
- Honma, Teruki;
- Shirouzu, Mikako;
- Fukami, Takehiro;
- Matsuo, Yuichi;
- Inaoka, Daniel Ken;
- Kita, Kiyoshi;
- Tanaka, Akiko
Publication type:
Article
Thymic Stromal Lymphopoietin Gene Promoter Polymorphisms Are Associated with Susceptibility to Bronchial Asthma.
Published in:
American Journal of Respiratory Cell & Molecular Biology, 2011, v. 44, n. 6, p. 787, doi. 10.1165/rcmb.2009-0418OC
By:
- Michishige Harada;
- Tomomitsu Hirota;
- Jodo, Aya I.;
- Yuki Hitomi;
- Masafumi Sakashita;
- Tatsuhiko Tsunoda;
- Takehiko Miyagawa;
- Satoru Doi;
- Makoto Kameda;
- Kimie Fujita;
- Akihiko Miyatake;
- Tadao Enomoto;
- Emiko Noguchi;
- Hironori Masuko;
- Tohru Sakamoto;
- Nobuyuki Hizawa;
- Yoichi Suzuki;
- Shigemi Yoshihara;
- Mitsuru Adachi;
- Motohiro Ebisawa
Publication type:
Article
Identification of HLA-A*02:06:01 as the primary disease susceptibility HLA allele in cold medicine-related Stevens-Johnson syndrome with severe ocular complications by high-resolution NGS-based HLA typing.
Published in:
Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-52619-2
By:
- Nakatani, Ken;
- Ueta, Mayumi;
- Khor, Seik-Soon;
- Hitomi, Yuki;
- Okudaira, Yuko;
- Masuya, Anri;
- Wada, Yuki;
- Sotozono, Chie;
- Kinoshita, Shigeru;
- Inoko, Hidetoshi;
- Tokunaga, Katsushi
Publication type:
Article
The association of integration patterns of human papilloma virus and single nucleotide polymorphisms on immune- or DNA repair-related genes in cervical cancer patients.
Published in:
Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-49523-0
By:
- Joo, Jungnam;
- Omae, Yosuke;
- Hitomi, Yuki;
- Park, Boram;
- Shin, Hye-Jin;
- Yoon, Kyong-Ah;
- Sawai, Hiromi;
- Tsuiji, Makoto;
- Hayashi, Tomonori;
- Kong, Sun-Young;
- Tokunaga, Katsushi;
- Kim, Joo-Young
Publication type:
Article
Support Vector Machine model for hERG inhibitory activities based on the integrated hERG database using descriptor selection by NSGA-II.
Published in:
Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-47536-3
By:
- Ogura, Keiji;
- Sato, Tomohiro;
- Yuki, Hitomi;
- Honma, Teruki
Publication type:
Article
Analysis of whole Y-chromosome sequences reveals the Japanese population history in the Jomon period.
Published in:
Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-44473-z
By:
- Watanabe, Yusuke;
- Naka, Izumi;
- Khor, Seik-Soon;
- Sawai, Hiromi;
- Hitomi, Yuki;
- Tokunaga, Katsushi;
- Ohashi, Jun
Publication type:
Article
Novel HLA allele associations with susceptibility, staging, symptomatic state, autoimmune hepatitis and hepatocellular carcinoma events for primary biliary cholangitis in the Japanese population.
Published in:
Frontiers in Immunology, 2023, p. 1, doi. 10.3389/fimmu.2023.1151502
By:
- Seik-Soon Khor;
- Kazuko Ueno;
- Nao Nishida;
- Minae Kawashima;
- Yosuke Kawai;
- Yoshihiro Aiba;
- Yuki Hitomi;
- Masao Nagasaki;
- Minoru Nakamura;
- Katsushi Tokunaga
Publication type:
Article
Genomic Heritabilities and Correlations of 17 Traits Related to Obesity and Associated Conditions in the Japanese Population.
Published in:
G3: Genes | Genomes | Genetics, 2020, v. 10, n. 7, p. 2221, doi. 10.1534/g3.120.401242
By:
- Gervais, Olivier;
- Kazuko Ueno;
- Yosuke Kawai;
- Yuki Hitomi;
- Kazuharu Misawa;
- Shunsuke Teraguchi;
- Yen-Yen Wang;
- Katsushi Tokunaga;
- Masao Nagasaki
Publication type:
Article
Mutations in TNK2 in severe autosomal recessive infantile onset epilepsy.
Published in:
Annals of Neurology, 2013, v. 74, n. 3, p. 496, doi. 10.1002/ana.23934
By:
- Hitomi, Yuki;
- Heinzen, Erin L.;
- Donatello, Simona;
- Dahl, Hans‐Henrik;
- Damiano, John A.;
- McMahon, Jacinta M.;
- Berkovic, Samuel F.;
- Scheffer, Ingrid E.;
- Legros, Benjamin;
- Rai, Myriam;
- Weckhuysen, Sarah;
- Suls, Arvid;
- Jonghe, Peter;
- Pandolfo, Massimo;
- Goldstein, David B.;
- Bogaert, Patrick;
- Depondt, Chantal
Publication type:
Article
rs2013278 in the multiple immunological-trait susceptibility locus CD28 regulates the production of non-functional splicing isoforms.
Published in:
Human Genomics, 2022, v. 16, n. 1, p. 1, doi. 10.1186/s40246-022-00419-7
By:
- Hitomi, Yuki;
- Aiba, Yoshihiro;
- Ueno, Kazuko;
- Nishida, Nao;
- Kawai, Yosuke;
- Kawashima, Minae;
- Tsuiji, Makoto;
- Iwabuchi, Chisato;
- Takada, Sanami;
- Miyake, Noriko;
- Nagasaki, Masao;
- Tokunaga, Katsushi;
- Nakamura, Minoru
Publication type:
Article
HLA-VBSeq v2: improved HLA calling accuracy with full-length Japanese class-I panel.
Published in:
Human Genome Variation, 2019, v. 6, n. 1, p. N.PAG, doi. 10.1038/s41439-019-0061-y
By:
- Wang, Yen-Yen;
- Mimori, Takahiro;
- Khor, Seik-Soon;
- Gervais, Olivier;
- Kawai, Yosuke;
- Hitomi, Yuki;
- Tokunaga, Katsushi;
- Nagasaki, Masao
Publication type:
Article
rs1944919 on chromosome 11q23.1 and its effector genes COLCA1/COLCA2 confer susceptibility to primary biliary cholangitis.
Published in:
Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-84042-x
By:
- Hitomi, Yuki;
- Aiba, Yoshihiro;
- Kawai, Yosuke;
- Kojima, Kaname;
- Ueno, Kazuko;
- Nishida, Nao;
- Kawashima, Minae;
- Gervais, Olivier;
- Khor, Seik-Soon;
- Nagasaki, Masao;
- Tokunaga, Katsushi;
- Nakamura, Minoru;
- Tsuiji, Makoto
Publication type:
Article
Genome-wide association studies identify PRKCB as a novel genetic susceptibility locus for primary biliary cholangitis in the Japanese population.
Published in:
Human Molecular Genetics, 2017, v. 26, n. 3, p. 650, doi. 10.1093/hmg/ddw406
By:
- Minae Kawashima;
- Yuki Hitomi;
- Yoshihiro Aiba;
- Nao Nishida;
- Kaname Kojima;
- Yosuke Kawai;
- Hitomi Nakamura;
- Atsushi Tanaka;
- Mikio Zeniya;
- Etsuko Hashimoto;
- Hiromasa Ohira;
- Kazuhide Yamamoto;
- Masanori Abe;
- Kazuhiko Nakao;
- Satoshi Yamagiwa;
- Shuichi Kaneko;
- Masao Honda;
- Takeji Umemura;
- Takafumi Ichida;
- Masataka Seike
Publication type:
Article
A Pyrrolo-Pyrimidine Derivative Targets Human Primary AML Stem Cells in Vivo.
Published in:
Science Translational Medicine, 2013, v. 5, n. 181, p. 1, doi. 10.1126/scitranslmed.3004387
By:
- Yoriko Saito;
- Hitomi Yuki;
- Mitsuo Kuratani;
- Yoshinobu Hashizume;
- Shinsuke Takagi;
- Teruki Honma;
- Akiko Tanaka;
- Mikako Shirouzu;
- Junko Mikuni;
- Noriko Handa;
- Ikuko Ogahara;
- Akiko Sone;
- Yuho Najima;
- Yuri Tomabechi;
- Motoaki Wakiyama;
- Naoyuki Uchida;
- Mariko Tomizawa-Murasawa;
- Akiko Kaneko;
- Satoshi Tanaka;
- Nahoko Suzuki
Publication type:
Article
De novo mutations in epileptic encephalopathies.
Published in:
Nature, 2013, v. 501, n. 7466, p. 217, doi. 10.1038/nature12439
By:
- Allen, Andrew S.;
- Berkovic, Samuel F.;
- Cossette, Patrick;
- Delanty, Norman;
- Dlugos, Dennis;
- Eichler, Evan E.;
- Epstein, Michael P.;
- Glauser, Tracy;
- Goldstein, David B.;
- Han, Yujun;
- Heinzen, Erin L.;
- Hitomi, Yuki;
- Howell, Katherine B.;
- Johnson, Michael R.;
- Kuzniecky, Ruben;
- Lowenstein, Daniel H.;
- Lu, Yi-Fan;
- Madou, Maura R. Z.;
- Marson, Anthony G.;
- Mefford, Heather C.
Publication type:
Article
Discovery of the novel HLA‐B allele, HLA‐B*51:01:01:36 in a Japanese individual.
Published in:
HLA: Immune Response Genetics, 2019, v. 94, n. 5, p. 445, doi. 10.1111/tan.13658
By:
- Khor, Seik‐Soon;
- Hitomi, Yuki;
- Omae, Yosuke;
- Ogawa, Ayumi;
- Tokunaga, Katsushi
Publication type:
Article
Detection of the novel HLA‐A allele, HLA‐A*02:01:01:58, in a Japanese individual.
Published in:
HLA: Immune Response Genetics, 2019, v. 94, n. 5, p. 435, doi. 10.1111/tan.13657
By:
- Khor, Seik‐Soon;
- Hitomi, Yuki;
- Omae, Yosuke;
- Ishibashi, Yoshimi;
- Tokunaga, Katsushi
Publication type:
Article
Identification of the novel HLA‐DQB1 allele, HLA‐DQB1*05:03:01:04, in a Japanese individual.
Published in:
HLA: Immune Response Genetics, 2019, v. 94, n. 5, p. 466, doi. 10.1111/tan.13654
By:
- Khor, Seik‐Soon;
- Hitomi, Yuki;
- Omae, Yosuke;
- Ishibashi, Yoshimi;
- Tokunaga, Katsushi
Publication type:
Article
Genome-Wide Association Study for Chronic Hepatitis B Infection in the Thai Population.
Published in:
Frontiers in Genetics, 2022, v. 13, p. 1, doi. 10.3389/fgene.2022.887121
By:
- Ashouri, Saeideh;
- Khor, Seik-Soon;
- Hitomi, Yuki;
- Sawai, Hiromi;
- Nishida, Nao;
- Sugiyama, Masaya;
- Kawai, Yosuke;
- Posuwan, Nawarat;
- Tangkijvanich, Pisit;
- Komolmit, Piyawat;
- Tsuiji, Makoto;
- Shotelersuk, Vorasuk;
- Poovorawan, Yong;
- Mizokami, Masashi;
- Tokunaga, Katsushi
Publication type:
Article
Implementation of π-π interactions in molecular dynamics simulation.
Published in:
Journal of Computational Chemistry, 2007, v. 28, n. 6, p. 1091, doi. 10.1002/jcc.20557
By:
- Yuki, Hitomi;
- Tanaka, Yoshikazu;
- Hata, Masayuki;
- Ishikawa, Hidenori;
- Neya, Saburo;
- Hoshino, Tyuji
Publication type:
Article
POGLUT1, the putative effector gene driven by rs2293370 in primary biliary cholangitis susceptibility locus chromosome 3q13.33.
Published in:
Scientific Reports, 2019, v. 9, n. 1, p. 1, doi. 10.1038/s41598-018-36490-1
By:
- Hitomi, Yuki;
- Ueno, Kazuko;
- Kawai, Yosuke;
- Nishida, Nao;
- Kojima, Kaname;
- Kawashima, Minae;
- Aiba, Yoshihiro;
- Nakamura, Hitomi;
- Kouno, Hiroshi;
- Kouno, Hirotaka;
- Ohta, Hajime;
- Sugi, Kazuhiro;
- Nikami, Toshiki;
- Yamashita, Tsutomu;
- Katsushima, Shinji;
- Komeda, Toshiki;
- Ario, Keisuke;
- Naganuma, Atsushi;
- Shimada, Masaaki;
- Hirashima, Noboru
Publication type:
Article
Identification of a two-SNP PLA2R1 Haplotype and HLA-DRB1 Alleles as Primary Risk Associations in Idiopathic Membranous Nephropathy.
Published in:
Scientific Reports, 2018, v. 8, n. 1, p. 1, doi. 10.1038/s41598-018-33612-7
By:
- Latt, Khun Zaw;
- Honda, Kenjiro;
- Thiri, Myo;
- Hitomi, Yuki;
- Omae, Yosuke;
- Sawai, Hiromi;
- Kawai, Yosuke;
- Teraguchi, Shunsuke;
- Ueno, Kazuko;
- Nagasaki, Masao;
- Mabuchi, Akihiko;
- Kaga, Hajime;
- Komatsuda, Atsushi;
- Tokunaga, Katsushi;
- Noiri, Eisei
Publication type:
Article
Increased expression and altered localization of cathepsin Z are associated with progression to jaundice stage in primary biliary cholangitis.
Published in:
Scientific Reports, 2018, v. 8, n. 1, p. 1, doi. 10.1038/s41598-018-30146-w
By:
- Aiba, Yoshihiro;
- Harada, Kenichi;
- Ito, Masahiro;
- Suematsu, Takashi;
- Aishima, Shinichi;
- Hitomi, Yuki;
- Nishida, Nao;
- Kawashima, Minae;
- Takatsuki, Mitsuhisa;
- Eguchi, Susumu;
- Shimoda, Shinji;
- Nakamura, Hitomi;
- Komori, Atsumasa;
- Abiru, Seigo;
- Nagaoka, Shinya;
- Migita, Kiyoshi;
- Yatsuhashi, Hiroshi;
- Tokunaga, Katsushi;
- Nakamura, Minoru
Publication type:
Article
CD72 polymorphisms associated with alternative splicing modify susceptibility to human systemic lupus erythematosus through epistatic interaction with FCGR2B.
Published in:
Human Molecular Genetics, 2004, v. 13, n. 23, p. 2907, doi. 10.1093/hmg/ddh318
By:
- Hitomi, Yuki;
- Tsuchiya, Naoyuki;
- Kawasaki, Aya;
- Ohashi, Jun;
- Suzuki, Takeshi;
- Kyogoku, Chieko;
- Fukazawa, Toru;
- Bejrachandra, Sasitorn;
- Siriboonrit, Usanee;
- Chandanayingyong, Dasnayanee;
- Suthipinittharm, Puan;
- Tsao, Betty P.;
- Hashimoto, Hiroshi;
- Honda, Zen-ichiro;
- Tokunaga, Katsushi
Publication type:
Article
The Genetics of Primary Biliary Cholangitis: A GWAS and Post-GWAS Update.
Published in:
Genes, 2023, v. 14, n. 2, p. 405, doi. 10.3390/genes14020405
By:
- Hitomi, Yuki;
- Nakamura, Minoru
Publication type:
Article
Construction of an integrated database for hERG blocking small molecules.
Published in:
PLoS ONE, 2018, p. 1, doi. 10.1371/journal.pone.0199348
By:
- Sato, Tomohiro;
- Yuki, Hitomi;
- Ogura, Keiji;
- Honma, Teruki
Publication type:
Article
Molecular and morphological evidence of hybridization between native Ruditapes philippinarum and the introduced Ruditapes form in Japan.
Published in:
Conservation Genetics, 2013, v. 14, n. 3, p. 717, doi. 10.1007/s10592-013-0467-x
By:
- Kitada, Shuichi;
- Fujikake, Chie;
- Asakura, Yoshiho;
- Yuki, Hitomi;
- Nakajima, Kaori;
- Vargas, Kelley;
- Kawashima, Shiori;
- Hamasaki, Katsuyuki;
- Kishino, Hirohisa
Publication type:
Article
Mechanism of the decrease in catalytic activity of human cytochrome P450 2C9 polymorphic variants investigated by computational analysis.
Published in:
Journal of Computational Chemistry, 2010, v. 31, n. 15, p. 2746, doi. 10.1002/jcc.21568
By:
- SANO, ERI;
- LI, WEIHUA;
- YUKI, HITOMI;
- LIU, XINLI;
- FURIHATA, TOMOMI;
- KOBAYASHI, KAORU;
- CHIBA, KAN;
- NEYA, SABURO;
- HOSHINO, TYUJI
Publication type:
Article
Significance of functional disease-causal/susceptible variants identified by whole-genome analyses for the understanding of human diseases.
Published in:
Proceedings of the Japan Academy, Series B Physical & biological sciences, 2017, v. 93, n. 9, p. 657, doi. 10.2183/pjab.93.042
By:
- Yuki HITOMI;
- Katsushi TOKUNAGA
Publication type:
Article

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