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- Title
Synthesis of 5′-Thiamine-Capped RNA.
- Authors
Möhler, Marvin; Höfer, Katharina; Jäschke, Andres; Lönnberg, Harri; Strömberg, Roger
- Abstract
RNA 5′-modifications are known to extend the functional spectrum of ribonucleotides. In recent years, numerous non-canonical 5′-modifications, including adenosine-containing cofactors from the group of B vitamins, have been confirmed in all kingdoms of life. The structural component of thiamine adenosine triphosphate (thiamine-ATP), a vitamin B1 derivative found to accumulate in Escherichia coli and other organisms in response to metabolic stress conditions, suggests an analogous function as a 5′-modification of RNA. Here, we report the synthesis of thiamine adenosine dinucleotides and the preparation of pure 5′-thiamine-capped RNAs based on phosphorimidazolide chemistry. Furthermore, we present the incorporation of thiamine-ATP and thiamine adenosine diphosphate (thiamine-ADP) as 5′-caps of RNA by T7 RNA polymerase. Transcripts containing the thiamine modification were modified specifically with biotin via a combination of thiazole ring opening, nucleophilic substitution and copper-catalyzed azide-alkyne cycloaddition. The highlighted methods provide easy access to 5′-thiamine RNA, which may be applied in the development of thiamine-specific RNA capture protocols as well as the discovery and confirmation of 5′-thiamine-capped RNAs in various organisms.
- Subjects
THIAMIN pyrophosphate; RNA synthesis; VITAMIN B1; VITAMIN B complex; ADENOSINE triphosphate; RNA polymerases; ADENOSINE diphosphate
- Publication
Molecules, 2020, Vol 25, Issue 23, p5492
- ISSN
1420-3049
- Publication type
Article
- DOI
10.3390/molecules25235492