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- Title
Development of simple sequence repeat markers for Japanese isolates of Magnaporthe grisea.
- Authors
SUZUKI, F.; SUGA, H.; TOMIMURA, K.; FUJI, S.; ARAI, M.; KOBA, A.; NAKAJIMA, T.
- Abstract
We developed nine simple sequence repeat (SSR) markers useful for differentiating Japanese isolates of Magnaporthe grisea through a bioinformatic approach. Repeat sequences in the genome of M. grisea were identified by a Tandem Repeat Finding program. Length polymorphisms at 28 loci were examined, nine of which were selected on the basis of detected polymorphisms. These nine SSR markers showed a Nei's gene diversity ranging from 0.23 to 0.91 among 48 field isolates of two natural populations. These SSR markers are well suited for M. grisea epidemiology and population genetics.
- Subjects
PYRICULARIA grisea; BIOINFORMATICS; GENOMES; GENETICS; FUNGI; GENETIC polymorphisms
- Publication
Molecular Ecology Resources, 2009, Vol 9, Issue 2, p588
- ISSN
1755-098X
- Publication type
Article
- DOI
10.1111/j.1755-0998.2008.02446.x