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Editorial: Intelligent Systems for Genome Functional Annotations.
- Published in:
- 2020
- By:
- Publication type:
- Editorial
Functional Residues in Proteins.
- Published in:
- Journal of Amino Acids, 2011, p. 1, doi. 10.4061/2011/606354
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- Publication type:
- Article
Intestinal Epithelium-Derived Luminally Released Extracellular Vesicles in Sepsis Exhibit the Ability to Suppress TNF-α and IL-17A Expression in Mucosal Inflammation.
- Published in:
- International Journal of Molecular Sciences, 2020, v. 21, n. 22, p. 8445, doi. 10.3390/ijms21228445
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- Publication type:
- Article
Deciphering RNA-Recognition Patterns of Intrinsically Disordered Proteins.
- Published in:
- International Journal of Molecular Sciences, 2018, v. 19, n. 6, p. 1595, doi. 10.3390/ijms19061595
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- Publication type:
- Article
Analysis of electric moments of RNA-binding proteins: implications for mechanism and prediction.
- Published in:
- BMC Structural Biology, 2011, v. 11, n. 1, p. 8, doi. 10.1186/1472-6807-11-8
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- Publication type:
- Article
Prediction of mono- and di-nucleotide-specific DNA-binding sites in proteins using neural networks.
- Published in:
- BMC Structural Biology, 2009, v. 9, p. 1, doi. 10.1186/1472-6807-9-30
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- Publication type:
- Article
Context dependent reference states of solvent accessibility derived from native protein structures and assessed by predictability analysis.
- Published in:
- BMC Structural Biology, 2009, v. 9, p. 1, doi. 10.1186/1472-6807-9-25
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- Publication type:
- Article
Predictive modeling of moonlighting DNA-binding proteins.
- Published in:
- NAR Genomics & Bioinformatics, 2022, v. 4, n. 4, p. 1, doi. 10.1093/nargab/lqac091
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- Publication type:
- Article
Integrating sequence and gene expression information predicts genome-wide DNA-binding proteins and suggests a cooperative mechanism.
- Published in:
- Nucleic Acids Research, 2018, v. 46, n. 1, p. 54, doi. 10.1093/nar/gkx1166
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- Publication type:
- Article
Novel approach for selecting the best predictor for identifying the binding sites in DNA binding proteins.
- Published in:
- Nucleic Acids Research, 2013, v. 41, n. 16, p. 7606, doi. 10.1093/nar/gkt544
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- Publication type:
- Article
Distinct transcriptional regulatory modules underlie STAT3’s cell type-independent and cell type-specific functions.
- Published in:
- Nucleic Acids Research, 2013, v. 41, n. 4, p. 2155, doi. 10.1093/nar/gks1300
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- Publication type:
- Article
CCRXP: exploring clusters of conserved residues in protein structures.
- Published in:
- Nucleic Acids Research, 2010, v. 38, n. suppl_2, p. W398, doi. 10.1093/nar/gkq360
- By:
- Publication type:
- Article
Protein–DNA interactions: structural, thermodynamic and clustering patterns of conserved residues in DNA-binding proteins.
- Published in:
- Nucleic Acids Research, 2008, v. 36, n. 18, p. 5922, doi. 10.1093/nar/gkn573
- By:
- Publication type:
- Article
Automated Classification of Multiclass Brain Tumor MRI Images using Enhanced Deep Learning Technique.
- Published in:
- International Journal of Advanced Computer Science & Applications, 2023, v. 14, n. 11, p. 1181, doi. 10.14569/ijacsa.2023.01411120
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- Publication type:
- Article
Specific 5′CpG Island Methylation Signatures of FHIT and p16 Genes and Their Potential Diagnostic Relevance in Indian Breast Cancer Patients.
- Published in:
- DNA & Cell Biology, 2008, v. 27, n. 9, p. 517, doi. 10.1089/dna.2007.0660
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- Publication type:
- Article
Residue propensities, discrimination and binding site prediction of adenine and guanine phosphates.
- Published in:
- BMC Biochemistry, 2011, v. 12, n. 1, p. 20, doi. 10.1186/1471-2091-12-20
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- Publication type:
- Article
Profiles of microRNA networks in intestinal epithelial cells in a mouse model of colitis.
- Published in:
- Scientific Reports, 2015, p. 18174, doi. 10.1038/srep18174
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- Publication type:
- Article
Integrated Pathway Clusters with Coherent Biological Themes for Target Prioritisation.
- Published in:
- PLoS ONE, 2014, v. 9, n. 6, p. 1, doi. 10.1371/journal.pone.0099030
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- Publication type:
- Article
Partner-Aware Prediction of Interacting Residues in Protein-Protein Complexes from Sequence Data.
- Published in:
- PLoS ONE, 2011, v. 6, n. 12, p. 1, doi. 10.1371/journal.pone.0029104
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- Publication type:
- Article
Conformational changes in DNA-binding proteins: Relationships with precomplex features and contributions to specificity and stability.
- Published in:
- Proteins, 2014, v. 82, n. 5, p. 841, doi. 10.1002/prot.24462
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- Publication type:
- Article
SVM-Cabins: Prediction of solvent accessibility using accumulation cutoff set and support vector machine.
- Published in:
- Proteins, 2007, v. 68, n. 1, p. 82, doi. 10.1002/prot.21422
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- Publication type:
- Article
Prediction and evolutionary information analysis of protein solvent accessibility using multiple linear regression.
- Published in:
- Proteins, 2005, v. 61, n. 3, p. 481, doi. 10.1002/prot.20620
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- Publication type:
- Article
Real value prediction of solvent accessibility from amino acid sequence.
- Published in:
- Proteins, 2003, v. 50, n. 4, p. 629, doi. 10.1002/prot.10328
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- Publication type:
- Article
STGR Model and Relation between Growth Rate and Polytypism.
- Published in:
- Crystal Research & Technology, 1993, v. 28, n. 8, p. 1063, doi. 10.1002/crat.2170280806
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- Publication type:
- Article
A Statistical Thermodynamics and Growth Restrictions (STGR) Model of Polytypism with Special Reference to Zinc Sulfide.
- Published in:
- Crystal Research & Technology, 1993, v. 28, n. 6, p. 837, doi. 10.1002/crat.2170280612
- By:
- Publication type:
- Article
Polytypism in MX.
- Published in:
- Crystal Research & Technology, 1993, v. 28, n. 3, p. 325, doi. 10.1002/crat.2170280310
- By:
- Publication type:
- Article
Prediction of dinucleotide-specific RNA-binding sites in proteins.
- Published in:
- BMC Bioinformatics, 2011, v. 12, n. Suppl 13, p. 1, doi. 10.1186/1471-2105-12-S13-S5
- By:
- Publication type:
- Article
Integrated prediction of one-dimensional structural features and their relationships with conformational flexibility in helical membraneproteins.
- Published in:
- BMC Bioinformatics, 2010, v. 11, p. 533, doi. 10.1186/1471-2105-11-533
- By:
- Publication type:
- Article
PSSM-based prediction of DNA binding sites in proteins.
- Published in:
- BMC Bioinformatics, 2005, v. 6, p. 33, doi. 10.1186/1471-2105-6-33
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- Publication type:
- Article
ASAView: Database and tool for solvent accessibility representation in proteins.
- Published in:
- BMC Bioinformatics, 2004, v. 5, p. 1
- By:
- Publication type:
- Article
Molecular Characterization of HOXA2 and HOXA3 Binding Properties.
- Published in:
- Journal of Developmental Biology, 2021, v. 9, n. 4, p. 55, doi. 10.3390/jdb9040055
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- Publication type:
- Article
Current Insights and Advancements in Head and Neck Cancer: Emerging Biomarkers and Therapeutics with Cues from Single Cell and 3D Model Omics Profiling.
- Published in:
- Frontiers in Oncology, 2021, v. 11, p. 1, doi. 10.3389/fonc.2021.676948
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- Publication type:
- Article
ReadOut: structure-based calculation of direct and indirect readout energies and specificities for protein–DNA recognition.
- Published in:
- Nucleic Acids Research, 2006, v. 34, n. 11, p. w124, doi. 10.1093/nar/gkl104
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- Publication type:
- Article
TMBETA-NET: discrimination and prediction of membrane spanning β-strands in outer membrane proteins.
- Published in:
- Nucleic Acids Research, 2005, v. 33, n. suppl 2, p. w164, doi. 10.1093/nar/gki367
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- Publication type:
- Article
Qgrid: clustering tool for detecting charged and hydrophobic regions in proteins.
- Published in:
- Nucleic Acids Research, 2004, v. 32, n. suppl 2, p. w104, doi. 10.1093/nar/gkh363
- By:
- Publication type:
- Article
Brefeldin A-inhibited guanine nucleotide-exchange protein 3 (BIG3) is predicted to interact with its partner through an ARM-type α-helical structure.
- Published in:
- BMC Research Notes, 2014, v. 7, n. 1, p. 435, doi. 10.1186/1756-0500-7-435
- By:
- Publication type:
- Article
A Comparison of Shallow and Deep Learning Methods for Predicting Cognitive Performance of Stroke Patients From MRI Lesion Images.
- Published in:
- Frontiers in Neuroinformatics, 2019, p. 1, doi. 10.3389/fninf.2019.00053
- By:
- Publication type:
- Article
Modeling the three-dimensional structures of an unbound single-chain variable fragment (scFv) and its hypothetical complex with a Corynespora cassiicola toxin, cassiicolin.
- Published in:
- Journal of Molecular Modeling, 2010, v. 16, n. 12, p. 1883, doi. 10.1007/s00894-010-0680-1
- By:
- Publication type:
- Article
Improved pose and affinity predictions using different protocols tailored on the basis of data availability.
- Published in:
- Journal of Computer-Aided Molecular Design, 2016, v. 30, n. 9, p. 817, doi. 10.1007/s10822-016-9982-4
- By:
- Publication type:
- Article
Publisher Correction: Successional trajectory of bacterial communities in soil are shaped by plant-driven changes during secondary succession.
- Published in:
- 2020
- By:
- Publication type:
- Correction Notice
Successional trajectory of bacterial communities in soil are shaped by plant-driven changes during secondary succession.
- Published in:
- Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-66638-x
- By:
- Publication type:
- Article
PROCARB: A Database of Known and Modelled Carbohydrate-Binding Protein Structures with Sequence-Based Prediction Tools.
- Published in:
- Advances in Bioinformatics, 2010, p. 1, doi. 10.1155/2010/436036
- By:
- Publication type:
- Article
Look-up tables for protein solvent accessibility prediction and nearest neighbor effect analysis.
- Published in:
- Biopolymers, 2004, v. 75, n. 3, p. 209, doi. 10.1002/bip.20113
- By:
- Publication type:
- Article
Analysis and prediction of DNA-binding proteins and their binding residues based on composition, sequence and structural information.
- Published in:
- Bioinformatics, 2004, v. 20, n. 4, p. 477, doi. 10.1093/bioinformatics/btg432
- By:
- Publication type:
- Article
NETASA: neural network based prediction of solvent accessibility.
- Published in:
- Bioinformatics, 2002, v. 18, n. 6, p. 819, doi. 10.1093/bioinformatics/18.6.819
- By:
- Publication type:
- Article
Neural network-based prediction of transmembrane β-strand segments in outer membrane proteins.
- Published in:
- Journal of Computational Chemistry, 2004, v. 25, n. 5, p. 762, doi. 10.1002/jcc.10386
- By:
- Publication type:
- Article
Design and training of a neural network for predicting the solvent accessibility of proteins.
- Published in:
- Journal of Computational Chemistry, 2003, v. 24, n. 11, p. 1313
- By:
- Publication type:
- Article
APBioNet's annual International Conference on Bioinformatics (InCoB) returns to India in 2018.
- Published in:
- BMC Genomics, 2019, v. 19, n. 9, p. N.PAG, doi. 10.1186/s12864-019-5582-8
- By:
- Publication type:
- Article
Deciphering the Role of Residues Involved in Disorder-To-Order Transition Regions in Archaeal tRNA Methyltransferase 5.
- Published in:
- Genes, 2021, v. 12, n. 3, p. 399, doi. 10.3390/genes12030399
- By:
- Publication type:
- Article
Feature Selection for Topological Proximity Prediction of Single-Cell Transcriptomic Profiles in Drosophila Embryo Using Genetic Algorithm.
- Published in:
- Genes, 2021, v. 12, n. 1, p. 28, doi. 10.3390/genes12010028
- By:
- Publication type:
- Article