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- Title
Genomic resources for a historical collection of cultivated two-row European spring barley genotypes.
- Authors
Schreiber, Miriam; Wonneberger, Ronja; Haaning, Allison M.; Coulter, Max; Russell, Joanne; Himmelbach, Axel; Fiebig, Anne; Muehlbauer, Gary J.; Stein, Nils; Waugh, Robbie
- Abstract
Barley genomic resources are increasing rapidly, with the publication of a barley pangenome as one of the latest developments. Two-row spring barley cultivars are intensely studied as they are the source of high-quality grain for malting and distilling. Here we provide data from a European two-row spring barley population containing 209 different genotypes registered for the UK market between 1830 to 2014. The dataset encompasses RNA-sequencing data from six different tissues across a range of barley developmental stages, phenotypic datasets from two consecutive years of field-grown trials in the United Kingdom, Germany and the USA; and whole genome shotgun sequencing from all cultivars, which was used to complement the RNA-sequencing data for variant calling. The outcomes are a filtered SNP marker file, a phenotypic database and a large gene expression dataset providing a comprehensive resource which allows for downstream analyses like genome wide association studies or expression associations.
- Subjects
UNITED Kingdom; CULTIVARS; GENOME-wide association studies; GENE expression; WHOLE genome sequencing; GENOTYPES; MALTING
- Publication
Scientific Data, 2024, Vol 11, Issue 1, p1
- ISSN
2052-4463
- Publication type
Article
- DOI
10.1038/s41597-023-02850-4