Found: 41
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Revisiting the identification of canonical splice isoforms through integration of functional genomics and proteomics evidence.
- Published in:
- Proteomics, 2014, v. 14, n. 23/24, p. 2709, doi. 10.1002/pmic.201400170
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- Article
A splicing factor switch controls hematopoietic lineage specification of pluripotent stem cells.
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- EMBO Reports, 2021, v. 22, n. 1, p. 1, doi. 10.15252/embr.202050535
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- Article
TissueNexus: a database of human tissue functional gene networks built with a large compendium of curated RNA-seq data.
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- Nucleic Acids Research, 2022, v. 50, n. D1, p. D710, doi. 10.1093/nar/gkab1133
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- Article
Single-Cell Clustering Based on Shared Nearest Neighbor and Graph Partitioning.
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- Interdisciplinary Sciences: Computational Life Sciences, 2020, v. 12, n. 2, p. 117, doi. 10.1007/s12539-019-00357-4
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- Article
An interpretable boosting model to predict side effects of analgesics for osteoarthritis.
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- BMC Systems Biology, 2018, v. 12, n. 6, p. N.PAG, doi. 10.1186/s12918-018-0624-4
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- Article
Comprehensive Analysis of 34 Edible Flowers by the Determination of Nutritional Composition and Antioxidant Capacity Planted in Yunnan Province China.
- Published in:
- Molecules, 2023, v. 28, n. 13, p. 5260, doi. 10.3390/molecules28135260
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- Publication type:
- Article
iREAD: a tool for intron retention detection from RNA-seq data.
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- BMC Genomics, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s12864-020-6541-0
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- Article
Systematically Differentiating Functions for Alternatively Spliced Isoforms through Integrating RNA-seq Data.
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- PLoS Computational Biology, 2013, v. 9, n. 11, p. 1, doi. 10.1371/journal.pcbi.1003314
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- Article
Identifying new cancer genes based on the integration of annotated gene sets via hypergraph neural networks.
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- Bioinformatics, 2024, v. 40, p. i511, doi. 10.1093/bioinformatics/btae257
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- Article
IsoFrog: a reversible jump Markov Chain Monte Carlo feature selection-based method for predicting isoform functions.
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- Bioinformatics, 2023, v. 39, n. 9, p. 1, doi. 10.1093/bioinformatics/btad530
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- Publication type:
- Article
CellBRF: a feature selection method for single-cell clustering using cell balance and random forest.
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- Bioinformatics, 2023, v. 39, p. i368, doi. 10.1093/bioinformatics/btad216
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- Publication type:
- Article
GTFtools: a software package for analyzing various features of gene models.
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- Bioinformatics, 2022, v. 38, n. 20, p. 4806, doi. 10.1093/bioinformatics/btac561
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- Publication type:
- Article
AlzCode: a platform for multiview analysis of genes related to Alzheimer's disease.
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- Bioinformatics, 2022, v. 38, n. 7, p. 2030, doi. 10.1093/bioinformatics/btac033
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- Publication type:
- Article
IsoResolve: predicting splice isoform functions by integrating gene and isoform-level features with domain adaptation.
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- Bioinformatics, 2021, v. 37, n. 4, p. 522, doi. 10.1093/bioinformatics/btaa829
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- Publication type:
- Article
BaiHui: cross-species brain-specific network built with hundreds of hand-curated datasets.
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- Bioinformatics, 2019, v. 35, n. 14, p. 2486, doi. 10.1093/bioinformatics/bty1001
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- Publication type:
- Article
A Hybrid Clustering Algorithm for Identifying Cell Types from Single-Cell RNA-Seq Data.
- Published in:
- Genes, 2019, v. 10, n. 2, p. 98, doi. 10.3390/genes10020098
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- Publication type:
- Article
A Sequence-Based Novel Approach for Quality Evaluation of Third-Generation Sequencing Reads.
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- Genes, 2019, v. 10, n. 1, p. 44, doi. 10.3390/genes10010044
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- Publication type:
- Article
The Association of Gut Microbiota With Osteoporosis Is Mediated by Amino Acid Metabolism: Multiomics in a Large Cohort.
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- Journal of Clinical Endocrinology & Metabolism, 2021, v. 106, n. 10, p. e3852, doi. 10.1210/clinem/dgab492
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- Article
Feature importance sampling-based adaptive random forest as a useful tool to screen underlying lead compounds.
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- Journal of Chemometrics, 2011, v. 25, n. 4, p. 201, doi. 10.1002/cem.1375
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- Publication type:
- Article
Combination of kernel PCA and linear support vector machine for modeling a nonlinear relationship between bioactivity and molecular descriptors.
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- Journal of Chemometrics, 2011, v. 25, n. 2, p. 92, doi. 10.1002/cem.1364
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- Publication type:
- Article
Prediction of aqueous solubility of druglike organic compounds using partial least squares, back-propagation network and support vector machine.
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- Journal of Chemometrics, 2010, v. 24, n. 9, p. 584, doi. 10.1002/cem.1321
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- Publication type:
- Article
Model population analysis for variable selection.
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- Journal of Chemometrics, 2010, v. 24, n. 7/8, p. 418, doi. 10.1002/cem.1300
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- Publication type:
- Article
Variable complementary network: a novel approach for identifying biomarkers and their mutual associations.
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- Metabolomics, 2012, v. 8, n. 6, p. 1218, doi. 10.1007/s11306-012-0410-z
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- Publication type:
- Article
Integrative functional genomic analysis of intron retention in human and mouse brain with Alzheimer's disease.
- Published in:
- Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2021, v. 17, n. 6, p. 984, doi. 10.1002/alz.12254
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- Publication type:
- Article
FROM SYSTEMS LEVEL TRANSCRIPTOMICS TO NEW IMMUNE TARGETS FOR ALZHEIMER’S DISEASE.
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- Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2016, v. 12, p. P215, doi. 10.1016/j.jalz.2016.06.383
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- Publication type:
- Article
Cohort Profile: Guangzhou Nutrition and Health Study (GNHS): A Population-based Multi-omics Study.
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- Journal of Epidemiology, 2024, v. 34, n. 6, p. 301, doi. 10.2188/jea.JE20230108
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- Publication type:
- Article
Brain-specific functional relationship networks inform autism spectrum disorder gene prediction.
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- Translational Psychiatry, 2018, v. 8, n. 1, p. 1, doi. 10.1038/s41398-018-0098-6
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- Article
Modulating innate immune activation states impacts the efficacy of specific Aβ immunotherapy.
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- Molecular Neurodegeneration, 2021, v. 16, n. 1, p. 1, doi. 10.1186/s13024-021-00453-4
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- Publication type:
- Article
ClusterMine: A knowledge-integrated clustering approach based on expression profiles of gene sets.
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- Journal of Bioinformatics & Computational Biology, 2020, v. 18, n. 3, p. N.PAG, doi. 10.1142/S0219720020400090
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- Publication type:
- Article
RFCell: A Gene Selection Approach for scRNA-seq Clustering Based on Permutation and Random Forest.
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- Frontiers in Genetics, 2021, v. 12, p. 1, doi. 10.3389/fgene.2021.665843
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- Article
Sc-GPE: A Graph Partitioning-Based Cluster Ensemble Method for Single-Cell.
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- Frontiers in Genetics, 2020, v. 11, p. N.PAG, doi. 10.3389/fgene.2020.604790
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- Publication type:
- Article
Identification of Stage-Specific Genes Associated With Lupus Nephritis and Response to Remission Induction in (NZB × NZW)F1 and NZM2410 Mice.
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- 2014
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- Publication type:
- Journal Article
Identification of Stage-Specific Genes Associated With Lupus Nephritis and Response to Remission Induction in (NZB × NZW)F1 and NZM2410 Mice.
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- Arthritis & Rheumatology, 2014, v. 66, n. 8, p. 2246, doi. 10.1002/art.38679
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- Publication type:
- Article
FEED: a feature selection method based on gene expression decomposition for single cell clustering.
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- Briefings in Bioinformatics, 2023, v. 24, n. 6, p. 1, doi. 10.1093/bib/bbad389
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- Article
Computational approaches for detecting disease-associated alternative splicing events.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad106
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- Publication type:
- Article
integrated brain-specific network identifies genes associated with neuropathologic and clinical traits of Alzheimer's disease.
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- Briefings in Bioinformatics, 2022, v. 23, n. 1, p. 1, doi. 10.1093/bib/bbab522
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- Publication type:
- Article
REBET: a method to determine the number of cell clusters based on batch effect removal.
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- Briefings in Bioinformatics, 2021, v. 22, n. 6, p. 1, doi. 10.1093/bib/bbab204
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- Publication type:
- Article
Identifying the tissues-of-origin of circulating cell-free DNAs is a promising way in noninvasive diagnostics.
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- Briefings in Bioinformatics, 2021, v. 22, n. 3, p. 1, doi. 10.1093/bib/bbaa060
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- Publication type:
- Article
scCAD: Cluster decomposition-based anomaly detection for rare cell identification in single-cell expression data.
- Published in:
- Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-51891-9
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- Publication type:
- Article
Prenatal and postnatal antibiotic exposure influences the gut microbiota of preterm infants in neonatal intensive care units.
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- Annals of Clinical Microbiology & Antimicrobials, 2018, v. 17, p. 1, doi. 10.1186/s12941-018-0264-y
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- Publication type:
- Article
A Network of Splice Isoforms for the Mouse.
- Published in:
- Scientific Reports, 2016, p. 24507, doi. 10.1038/srep24507
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- Publication type:
- Article