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- Title
Systems Biology Markup Language (SBML) Level 3 Package: Distributions, Version 1, Release 1.
- Authors
Smith, Lucian P.; Moodie, Stuart L.; Bergmann, Frank T.; Gillespie, Colin; Keating, Sarah M.; König, Matthias; Myers, Chris J.; Swat, Maciek J.; Wilkinson, Darren J.; Hucka, Michael
- Abstract
Biological models often contain elements that have inexact numerical values, since they are based on values that are stochastic in nature or data that contains uncertainty. The Systems Biology Markup Language (SBML) Level 3 Core specification does not include an explicit mechanism to include inexact or stochastic values in a model, but it does provide a mechanism for SBML packages to extend the Core specification and add additional syntactic constructs. The SBML Distributions package for SBML Level 3 adds the necessary features to allow models to encode information about the distribution and uncertainty of values underlying a quantity.
- Subjects
SYNTHETIC biology; COMPUTER software; NUMERICAL analysis; STOCHASTIC analysis; DATA analysis
- Publication
Journal of Integrative Bioinformatics, 2020, Vol 17, Issue 2/3, p1
- ISSN
1613-4516
- Publication type
Article
- DOI
10.1515/jib-2020-0018