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MitoFish, MitoAnnotator, and MiFish Pipeline: Updates in 10 Years.
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- Molecular Biology & Evolution, 2023, v. 40, n. 3, p. 1, doi. 10.1093/molbev/msad035
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Evolution of the Mitochondrial Genome in Cephalochordata as Inferred from Complete Nucleotide Sequences from Two Epigonichthys Species.
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- Journal of Molecular Evolution, 2005, v. 60, n. 4, p. 526, doi. 10.1007/s00239-004-0238-x
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Gene Rearrangements and Evolution of tRNA Pseudogenes in the Mitochondrial Genome of the Parrotfish (Teleostei: Perciformes: Scaridae).
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- Journal of Molecular Evolution, 2004, v. 59, n. 3, p. 287, doi. 10.1007/s00239-004-2621-z
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Mitochondrial Genomics of Ostariophysan Fishes: Perspectives on Phylogeny and Biogeography.
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- Journal of Molecular Evolution, 2003, v. 56, n. 4, p. 464, doi. 10.1007/s00239-002-2417-y
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- Article
Complete Mitochondrial DNA Sequence of Conger myriaster (Teleostei: Anguilliformes): Novel Gene Order for Vertebrate Mitochondrial Genomes and the Phylogenetic Implications for Anguilliform Families.
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- Journal of Molecular Evolution, 2001, v. 52, n. 4, p. 311, doi. 10.1007/s002390010161
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Molecular systematics of the anchovy genus Encrasicholina in the Northwest Pacific.
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- PLoS ONE, 2017, v. 12, n. 7, p. 1, doi. 10.1371/journal.pone.0181329
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Wide distribution range of rhizobial symbionts associated with pantropical sea-dispersed legumes.
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- Antonie van Leeuwenhoek, 2016, v. 109, n. 12, p. 1605, doi. 10.1007/s10482-016-0761-y
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Environmental DNA biomonitoring in biodiversity hotspots: A case study of fishes of the Okavango Delta.
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- Environmental DNA, 2023, v. 5, n. 6, p. 1720, doi. 10.1002/edn3.494
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Environmental DNA metabarcoding for biodiversity monitoring of a highly diverse tropical fish community in a coral reef lagoon: Estimation of species richness and detection of habitat segregation.
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- Environmental DNA, 2021, v. 3, n. 1, p. 55, doi. 10.1002/edn3.132
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An illustrated manual for environmental DNA research: Water sampling guidelines and experimental protocols.
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- Environmental DNA, 2021, v. 3, n. 1, p. 8, doi. 10.1002/edn3.121
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Sedimentary eDNA provides different information on timescale and fish species composition compared with aqueous eDNA.
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- Environmental DNA, 2020, v. 2, n. 4, p. 505, doi. 10.1002/edn3.75
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Evaluating intraspecific genetic diversity using environmental DNA and denoising approach: A case study using tank water.
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- Environmental DNA, 2020, v. 2, n. 1, p. 42, doi. 10.1002/edn3.44
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Evaluation of detection probabilities at the water-filtering and initial PCR steps in environmental DNA metabarcoding using a multispecies site occupancy model.
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- Scientific Reports, 2019, v. 9, n. 1, p. 1, doi. 10.1038/s41598-019-40233-1
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Environmental DNA analysis shows high potential as a tool for estimating intraspecific genetic diversity in a wild fish population.
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- Molecular Ecology Resources, 2020, v. 20, n. 5, p. 1248, doi. 10.1111/1755-0998.13165
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- Article
Environmental DNA enables detection of terrestrial mammals from forest pond water.
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- Molecular Ecology Resources, 2017, v. 17, n. 6, p. e63, doi. 10.1111/1755-0998.12690
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Evaluation of fish biodiversity in estuaries using environmental DNA metabarcoding.
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- PLoS ONE, 2020, v. 15, n. 10, p. 1, doi. 10.1371/journal.pone.0231127
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Pilot study of a comprehensive resource estimation method from environmental DNA using universal D-loop amplification primers.
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- Functional & Integrative Genomics, 2023, v. 23, n. 2, p. 1, doi. 10.1007/s10142-023-01013-3
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Phylogenomic resolution of the monotypic and enigmatic Amarsipus, the Bagless Glassfish (Teleostei, Amarsipidae).
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- Zoologica Scripta, 2021, v. 50, n. 4, p. 411, doi. 10.1111/zsc.12477
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Molecular phylogeny of the fishes traditionally referred to Cyprinini sensu stricto (Teleostei: Cypriniformes) L. Yang et al. Molecular phylogeny of Cyprinini sensu stricto.
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- Zoologica Scripta, 2010, v. 39, n. 6, p. 527, doi. 10.1111/j.1463-6409.2010.00443.x
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Structure and variation of the mitochondrial genome of fishes.
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- BMC Genomics, 2016, v. 17, p. 719, doi. 10.1186/s12864-016-3054-y
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Speciation in the open ocean.
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- Nature, 1997, v. 389, n. 6653, p. 803, doi. 10.1038/39774
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Composition of Glycosaminoglycans in Elasmobranchs including Several Deep-Sea Sharks: Identification of Chondroitin/Dermatan Sulfate from the Dried Fins of Isurus oxyrinchus and Prionace glauca.
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- PLoS ONE, 2015, v. 10, n. 3, p. 1, doi. 10.1371/journal.pone.0120860
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Evolutionary Origin of the Scombridae (Tunas and Mackerels): Members of a Paleogene Adaptive Radiation with 14 Other Pelagic Fish Families.
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- PLoS ONE, 2013, v. 8, n. 9, p. 1, doi. 10.1371/journal.pone.0073535
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Mitogenomic Evidence for an Indo-West Pacific Origin of the Clupeoidei (Teleostei: Clupeiformes).
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- PLoS ONE, 2013, v. 8, n. 2, p. 1, doi. 10.1371/journal.pone.0056485
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Comparable Ages for the Independent Origins of Electrogenesis in African and South American Weakly Electric Fishes.
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- PLoS ONE, 2012, v. 7, n. 5, p. 1, doi. 10.1371/journal.pone.0036287
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Multiple Invasions into Freshwater by Pufferfishes (Teleostei: Tetraodontidae): A Mitogenomic Perspective.
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- PLoS ONE, 2011, v. 6, n. 2, p. 1, doi. 10.1371/journal.pone.0017410
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Mitogenomic sequences and evidence from unique gene rearrangements corroborate evolutionary relationships of myctophiformes (Neoteleostei).
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- BMC Evolutionary Biology, 2013, v. 13, n. 1, p. 1, doi. 10.1186/1471-2148-13-111
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Evolutionary history of Otophysi (Teleostei), a major clade of the modern freshwater fishes: Pangaean origin and Mesozoic radiation.
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- BMC Evolutionary Biology, 2011, v. 11, n. 1, p. 177, doi. 10.1186/1471-2148-11-177
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Intron-loss evolution of hatching enzyme genes in Teleostei.
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- BMC Evolutionary Biology, 2010, v. 10, p. 260, doi. 10.1186/1471-2148-10-260
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Evolutionary history of anglerfishes (Teleostei:Lophiiformes): a mitogenomic perspective.
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- BMC Evolutionary Biology, 2010, v. 10, p. 58, doi. 10.1186/1471-2148-10-58
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Biogeography and evolution of the Carassius auratus-complex in East Asia.
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- BMC Evolutionary Biology, 2010, v. 10, p. 1, doi. 10.1186/1471-2148-10-7
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Mitogenomic evaluation of the historical biogeography of cichlids toward reliable dating of teleostean divergences.
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- BMC Evolutionary Biology, 2008, v. 8, p. 1, doi. 10.1186/1471-2148-8-215
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A new perspective on phylogeny and evolution of tetraodontiform fishes (Pisces: Acanthopterygii) based on whole mitochondrial genome sequences: Basal ecological diversification?
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- BMC Evolutionary Biology, 2008, v. 8, p. 1
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The mitogenomic contributions to molecular phylogenetics and evolution of fishes: a 15-year retrospect.
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- Ichthyological Research, 2015, v. 62, n. 1, p. 29, doi. 10.1007/s10228-014-0440-9
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A molecular timescale for the evolution of the African freshwater fish family Kneriidae (Teleostei: Gonorynchiformes).
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- Ichthyological Research, 2012, v. 59, n. 2, p. 104, doi. 10.1007/s10228-011-0258-7
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The phylogenetic position of an undescribed paedomorphic clupeiform taxon: mitogenomic evidence.
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- Ichthyological Research, 2008, v. 55, n. 4, p. 328
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Some aspects of the biology of the goblin shark, Mitsukurina owstoni , collected from the Tokyo Submarine Canyon and adjacent waters, Japan.
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- Ichthyological Research, 2007, v. 54, n. 4, p. 388, doi. 10.1007/s10228-007-0414-2
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Mitochondrial genome and a nuclear gene indicate a novel phylogenetic position of deep-sea tube-eye fish (Stylephoridae).
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- Ichthyological Research, 2007, v. 54, n. 4, p. 323, doi. 10.1007/s10228-007-0408-0
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New primers for amplifying and sequencing the mitochondrial ND4/ND5 gene region of the Cypriniformes (Actinopterygii: Ostariophysi).
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- Ichthyological Research, 2006, v. 53, n. 1, p. 75, doi. 10.1007/s10228-005-0303-5
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Mitochondrial genomes and phylogeny of the ocean sunfishes (Tetraodontiformes: Molidae).
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- Ichthyological Research, 2004, v. 51, n. 3, p. 269, doi. 10.1007/s10228-004-0218-6
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- Article
PCR-Based Approach for Sequencing Mitochondrial Genomes of Decapod Crustaceans, with a Practical Example from Kuruma Prawn (Marsupenaeus japonicus).
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- Marine Biotechnology, 2004, v. 6, n. 5, p. 419, doi. 10.1007/s10126-003-0036-2
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Organization of the Mitochondrial Genome of Antarctic Krill Euphausia superba (Crustacea: Malacostraca).
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- Marine Biotechnology, 2004, v. 6, n. 3, p. 238
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Complete Mitochondrial DNA Sequence of Tigriopus japonicus (Crustacea: Copepoda)
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- Marine Biotechnology, 2002, v. 4, n. 5, p. 406, doi. 10.1007/s10126-002-0033-x
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Organization of the Mitochondrial Genome of a Deep-Sea Fish, Gonostoma gracile (Teleostei: Stomiiformes): First Example of Transfer RNA Gene Rearrangements in Bony Fishes.
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- Marine Biotechnology, 1999, v. 1, n. 5, p. 416, doi. 10.1007/PL00011798
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Environmental DNA metabarcoding reveals the presence of a small, quick-moving, nocturnal water shrew in a forest stream.
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- Conservation Genetics, 2020, v. 21, n. 6, p. 1079, doi. 10.1007/s10592-020-01310-5
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Temperature sensitivity of the interspecific interaction strength of coastal marine fish communities.
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- eLife, 2023, p. 1, doi. 10.7554/eLife.85795
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MiFish metabarcoding: a high-throughput approach for simultaneous detection of multiple fish species from environmental DNA and other samples.
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- Fisheries Science, 2020, v. 86, n. 6, p. 939, doi. 10.1007/s12562-020-01461-x
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Complete mitochondrial DNA sequence of the Japanese anchovy Engraulis japonicus.
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- Fisheries Science, 2001, v. 67, n. 5, p. 828, doi. 10.1046/j.1444-2906.2001.00329.x
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Complete mitochondrial DNA sequence of ayu Plecoglossus altivelis.
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- Fisheries Science, 2001, v. 67, n. 3, p. 474, doi. 10.1046/j.1444-2906.2001.00283.x
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Complete mitochondrial DNA sequence of the Japanese eel Anguilla japonica.
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- Fisheries Science, 2001, v. 67, n. 1, p. 118, doi. 10.1046/j.1444-2906.2001.00207.x
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- Article