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Expanding the Repertoire of Carbapenem-Hydrolyzing Metallo-β-Lactamases by Functional Metagenomic Analysis of Soil Microbiota.
Published in:
Frontiers in Microbiology, 2016, v. 7, p. 1, doi. 10.3389/fmicb.2016.01985
By:
- Gudeta, Dereje D.;
- Bortolaia, Valeria;
- Pollini, Simona;
- Docquier, Jean-Denis;
- Rossolini, Gian M.;
- Amos, Gregory C. A.;
- Wellington, Elizabeth M. H.;
- Guardabassi, Luca
Publication type:
Article
Carbapenemase VCC-1-Producing Vibrio cholerae in Coastal Waters of Germany.
Published in:
2017
By:
- Hammerl, Jens A.;
- Jäckel, Claudia;
- Bortolaia, Valeria;
- Schwartz, Keike;
- Bier, Nadja;
- Hendriksen, Rene S.;
- Guerra, Beatriz;
- Strauch, Eckhard
Publication type:
journal article
Emergence of OXA-48-producing Klebsiella pneumoniae in Lithuania, 2023: a multi-cluster, multi-hospital outbreak.
Published in:
Eurosurveillance (15607917), 2024, v. 29, n. 16, p. 12, doi. 10.2807/1560-7917.ES.2024.29.16.2400188
By:
- Greičius, Paulius;
- Linkevicius, Marius;
- Razmuk, Jelena;
- Sinotova, Jekaterina;
- Alm, Erik;
- Svartström, Olov;
- Bortolaia, Valeria;
- Kudirkienė, Eglė;
- Roer, Louise;
- Hendriksen, Rene S.;
- Tamoliūnaitė, Gabija;
- Palm, Daniel;
- Monnet, Dominique L.;
- Kohlenberg, Anke;
- Griškevičius, Algirdas
Publication type:
Article
Plasmid ATLAS: plasmid visual analytics and identification in high-throughput sequencing data.
Published in:
Nucleic Acids Research, 2019, v. 47, n. D1, p. D188, doi. 10.1093/nar/gky1073
By:
- Jesus, Tiago F;
- Ribeiro-Gonçalves, Bruno;
- Silva, Diogo N;
- Bortolaia, Valeria;
- Ramirez, Mário;
- Carriço, João A
Publication type:
Article
CTX-M-1 and CTX-M-15-producing Escherichia coli in dog faeces from public gardens.
Published in:
Acta Veterinaria Scandinavica, 2015, v. 57, p. 1, doi. 10.1186/s13028-015-0174-3
By:
- Damborg, Peter;
- Morsing, Malene Kjelin;
- Petersen, Tanja;
- Bortolaia, Valeria;
- Guardabassi, Luca
Publication type:
Article
One Day in Denmark: Comparison of Phenotypic and Genotypic Antimicrobial Susceptibility Testing in Bacterial Isolates From Clinical Settings.
Published in:
Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.804627
By:
- Rebelo, Ana Rita;
- Bortolaia, Valeria;
- Leekitcharoenphon, Pimlapas;
- Hansen, Dennis Schrøder;
- Nielsen, Hans Linde;
- Ellermann-Eriksen, Svend;
- Kemp, Michael;
- Røder, Bent Løwe;
- Frimodt-Møller, Niels;
- Søndergaard, Turid Snekloth;
- Coia, John Eugenio;
- Østergaard, Claus;
- Westh, Henrik;
- Aarestrup, Frank M.
Publication type:
Article
Multiplex PCR for detection of plasmid-mediated colistin resistance determinants, mcr-1, mcr-2, mcr-3, mcr-4 and mcr-5 for surveillance purposes.
Published in:
Eurosurveillance (15607917), 2018, v. 23, n. 6, p. 29, doi. 10.2807/1560-7917.ES.2018.23.6.17-00672
By:
- Rebelo, Ana Rita;
- Bortolaia, Valeria;
- Kjeldgaard, Jette S.;
- Pedersen, Susanne K.;
- Leekitcharoenphon, Pimlapas;
- Hansen, Inge M.;
- Guerra, Beatriz;
- Malorny, Burkhard;
- Borowiak, Maria;
- Hammerl, Jens Andre;
- Battisti, Antonio;
- Franco, Alessia;
- Alba, Patricia;
- Perrin-Guyomard, Agnes;
- Granier, Sophie A.;
- De Frutos, Cristina;
- Escobar;
- Malhotra-Kumar, Surbhi;
- Villa, Laura;
- Carattoli, Alessandra
Publication type:
Article
Evaluation and validation of laboratory procedures for the surveillance of ESBL-, AmpC-, and carbapenemase-producing Escherichia coli from fresh meat and caecal samples.
Published in:
Frontiers in Microbiology, 2023, p. 01, doi. 10.3389/fmicb.2023.1229542
By:
- Hendriksen, Rene S.;
- Cavaco, Lina M.;
- Guerra, Beatriz;
- Bortolaia, Valeria;
- Agersø, Yvonne;
- Svendsen, Christina Aaby;
- Nielsen, Hanne Nørgaard;
- Kjeldgaard, Jette Sejer;
- Pedersen, Susanne Karlsmose;
- Fertner, Mette;
- Hasman, Henrik
Publication type:
Article
Occurrence and Characterisation of Colistin-Resistant Escherichia coli in Raw Meat in Southern Italy in 2018–2020.
Published in:
Microorganisms, 2022, v. 10, n. 9, p. 1805, doi. 10.3390/microorganisms10091805
By:
- Nobili, Gaia;
- La Bella, Gianfranco;
- Basanisi, Maria Grazia;
- Damato, Annita Maria;
- Coppola, Rosa;
- Migliorelli, Rachele;
- Rondinone, Valeria;
- Leekitcharoenphon, Pimlapas;
- Bortolaia, Valeria;
- La Salandra, Giovanna
Publication type:
Article
High diversity and spread of mcr transferable genes encoding colistin resistance among multidrug-resistant isolates from primary productions in Italy.
Published in:
International Journal Of Health Animal Science & Food Safety, 2018, v. 5, p. 58
By:
- Alba, Patricia;
- Leekitcharoenphon, Pimlapas;
- Franco, Alessia;
- Feltrin, Fabiola;
- Ianzano, Angela;
- Caprioli, Andrea;
- Buccella, Carmela;
- Onorati, Roberta;
- Lorenzetti, Serena;
- Sorbara, Luigi;
- Cerci, Tamara;
- Bottoni, Francesco;
- Hendriksen, Renè S.;
- Bortolaia, Valeria;
- Battisti, Antonio
Publication type:
Article
Catalogue of Antimicrobial Resistance Genes in Species of Bacillus used to Produce Food Enzymes and Feed Additives.
Published in:
EFSA Supporting Publications, 2024, v. 21, n. 7, p. 1, doi. 10.2903/sp.efsa.2024.EN-8931
By:
- Peluso, Silvia;
- Aguilera‐Gómez, Margarita;
- Bortolaia, Valeria;
- Catania, Francesco;
- Cocconcelli, Pier Sandro;
- Herman, Lieve;
- Moxon, Simon;
- Vernis, Laurence;
- Iacono, Giovanni;
- Lunardi, Simone;
- Pettenati, Elisa;
- Gallo, Arianna;
- Aguilera, Jaime
Publication type:
Article
Exploiting phage receptor binding proteins to enable endolysins to kill Gram-negative bacteria.
Published in:
Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-68983-3
By:
- Zampara, Athina;
- Sørensen, Martine C. Holst;
- Grimon, Dennis;
- Antenucci, Fabio;
- Vitt, Amira Ruslanovna;
- Bortolaia, Valeria;
- Briers, Yves;
- Brøndsted, Lone
Publication type:
Article
Molecular Epidemiology of mcr-Encoded Colistin Resistance in Enterobacteriaceae From Food-Producing Animals in Italy Revealed Through the EU Harmonized Antimicrobial Resistance Monitoring.
Published in:
Frontiers in Microbiology, 2018, p. 1, doi. 10.3389/fmicb.2018.01217
By:
- Alba, Patricia;
- Leekitcharoenphon, Pimlapas;
- Franco, Alessia;
- Feltrin, Fabiola;
- Ianzano, Angela;
- Caprioli, Andrea;
- Stravino, Fiorentino;
- Hendriksen, Rene S.;
- Bortolaia, Valeria;
- Battisti, Antonio
Publication type:
Article
ESBL and Amp C β-Lactamase Encoding Genes in E. coli From Pig and Pig Farm Workers in Vietnam and Their Association With Mobile Genetic Elements.
Published in:
Frontiers in Microbiology, 2021, v. 11, p. N.PAG, doi. 10.3389/fmicb.2021.629139
By:
- Hounmanou, Yaovi Mahuton Gildas;
- Bortolaia, Valeria;
- Dang, Son Thi Thanh;
- Truong, Duong;
- Olsen, John E.;
- Dalsgaard, Anders
Publication type:
Article
One Day in Denmark: Nationwide point-prevalence survey of human bacterial isolates and comparison of classical and whole-genome sequence-based species identification methods.
Published in:
PLoS ONE, 2022, v. 17, n. 2, p. 1, doi. 10.1371/journal.pone.0261999
By:
- Rebelo, Ana Rita;
- Ibfelt, Tobias;
- Bortolaia, Valeria;
- Leekitcharoenphon, Pimlapas;
- Hansen, Dennis Schrøder;
- Nielsen, Hans Linde;
- Ellermann-Eriksen, Svend;
- Kemp, Michael;
- Røder, Bent Løwe;
- Frimodt-Møller, Niels;
- Søndergaard, Turid Snekloth;
- Coia, John Eugenio;
- Østergaard, Claus;
- Pedersen, Michael;
- Westh, Henrik;
- Aarestrup, Frank Møller
Publication type:
Article
Danish Whole-Genome-Sequenced Candida albicans and Candida glabrata Samples Fit into Globally Prevalent Clades.
Published in:
Journal of Fungi, 2021, v. 7, n. 11, p. 1, doi. 10.3390/jof7110962
By:
- Szarvas, Judit;
- Rebelo, Ana Rita;
- Bortolaia, Valeria;
- Leekitcharoenphon, Pimlapas;
- Hansen, Dennis Schrøder;
- Nielsen, Hans Linde;
- Nørskov-Lauritsen, Niels;
- Kemp, Michael;
- Røder, Bent Løwe;
- Frimodt-Møller, Niels;
- Søndergaard, Turid Snekloth;
- Coia, John Eugenio;
- Østergaard, Claus;
- Westh, Henrik;
- Aarestrup, Frank Møller
Publication type:
Article
Technical specifications for a EU‐wide baseline survey of antimicrobial resistance in bacteria from aquaculture animals.
Published in:
EFSA Journal, 2024, v. 22, n. 7, p. 1, doi. 10.2903/j.efsa.2024.8928
By:
- Aerts, Marc;
- Baron, Sandrine;
- Bortolaia, Valeria;
- Hendriksen, Rene;
- Guerra, Beatriz;
- Stoicescu, Anca;
- Beloeil, Pierre‐Alexandre
Publication type:
Article
Cephalosporin-resistant Escherichia coli isolated from farm workers and pigs in northern Vietnam.
Published in:
2018
By:
- Dang, Son T. T.;
- Bortolaia, Valeria;
- Tran, Nhat T.;
- Le, Huan Q.;
- Dalsgaard, Anders
Publication type:
journal article
Co-localization of carbapenem (blaOXA-162) and colistin (mcr-1) resistance genes on a transferable IncHI2 plasmid in Escherichia coli of chicken origin.
Published in:
2021
By:
- Bortolaia, Valeria;
- Ronco, Troels;
- Romascu, Luminita;
- Nicorescu, Isabela;
- Milita, Nicoleta M;
- Vaduva, Angela M;
- Leekitcharoenphon, Pimlapas;
- Kjeldgaard, Jette S;
- Hansen, Inge M;
- Svendsen, Christina A;
- Mordhorst, Hanne;
- Guerra, Beatriz;
- Beloeil, Pierre-Alexandre;
- Hoffmann, Maria;
- Hendriksen, René S
Publication type:
Letter
Detection of mobile genetic elements associated with antibiotic resistance in Salmonella enterica using a newly developed web tool: MobileElementFinder.
Published in:
2021
By:
- Johansson, Markus H K;
- Bortolaia, Valeria;
- Tansirichaiya, Supathep;
- Aarestrup, Frank M;
- Roberts, Adam P;
- Petersen, Thomas N
Publication type:
journal article
ResFinder 4.0 for predictions of phenotypes from genotypes.
Published in:
2020
By:
- Bortolaia, Valeria;
- Kaas, Rolf S;
- Ruppe, Etienne;
- Roberts, Marilyn C;
- Schwarz, Stefan;
- Cattoir, Vincent;
- Philippon, Alain;
- Allesoe, Rosa L;
- Rebelo, Ana Rita;
- Florensa, Alfred Ferrer;
- Fagelhauer, Linda;
- Chakraborty, Trinad;
- Neumann, Bernd;
- Werner, Guido;
- Bender, Jennifer K;
- Stingl, Kerstin;
- Nguyen, Minh;
- Coppens, Jasmine;
- Xavier, Basil Britto;
- Malhotra-Kumar, Surbhi
Publication type:
journal article
IncI1 ST3 and IncI1 ST7 plasmids from CTX-M-1-producing Escherichia coli obtained from patients with bloodstream infections are closely related to plasmids from E. coli of animal origin.
Published in:
2019
By:
- Valcek, Adam;
- Roer, Louise;
- Overballe-Petersen, Søren;
- Hansen, Frank;
- Bortolaia, Valeria;
- Leekitcharoenphon, Pimlapas;
- Korsgaard, Helle B;
- Seyfarth, Anne Mette;
- Hendriksen, Rene S;
- Hasman, Henrik;
- Hammerum, Anette M
Publication type:
journal article
ST131 fimH22 Escherichia coli isolate with a blaCMY-2/IncI1/ST12 plasmid obtained from a patient with bloodstream infection: highly similar to E. coli isolates of broiler origin.
Published in:
2019
By:
- Roer, Louise;
- Overballe-Petersen, Søren;
- Hansen, Frank;
- Johannesen, Thor B;
- Stegger, Marc;
- Bortolaia, Valeria;
- Leekitcharoenphon, Pimlapas;
- Korsgaard, Helle B;
- Seyfarth, Anne Mette;
- Mossong, Joël;
- Wattiau, Pierre;
- Boland, Cécile;
- Hansen, Dennis S;
- Hasman, Henrik;
- Hammerum, Anette M;
- Hendriksen, Rene S
Publication type:
journal article
Chromobacterium spp. harbour Ambler class A β-lactamases showing high identity with KPC.
Published in:
2016
By:
- Gudeta, Dereje Dadi;
- Bortolaia, Valeria;
- Jayol, Aurélie;
- Poirel, Laurent;
- Nordmann, Patrice;
- Guardabassi, Luca
Publication type:
journal article
CTX-M-1 [beta]-lactamase expression in Escherichia coli is dependent on cefotaxime concentration, growth phase and gene location.
Published in:
2015
By:
- Kjeldsen, Thea S B;
- Overgaard, Martin;
- Nielsen, Søren S;
- Bortolaia, Valeria;
- Jelsbak, Lotte;
- Sommer, Morten;
- Guardabassi, Luca;
- Olsen, John E
Publication type:
Journal Article
High diversity of plasmids harbouring blaCMY-2 among clinical Escherichia coli isolates from humans and companion animals in the upper Midwestern USA.
Published in:
2014
By:
- Bortolaia, Valeria;
- Hansen, Katrine H;
- Nielsen, Christine A;
- Fritsche, Thomas R;
- Guardabassi, Luca
Publication type:
Journal Article
High diversity of plasmids harbouring blaCMY-2 among clinical Escherichia coli isolates from humans and companion animals in the upper Midwestern USA.
Published in:
Journal of Antimicrobial Chemotherapy (JAC), 2014, v. 69, n. 6, p. 1492, doi. 10.1093/jac/dku011
By:
- Bortolaia, Valeria;
- Hansen, Katrine H.;
- Nielsen, Christine A.;
- Fritsche, Thomas R.;
- Guardabassi, Luca
Publication type:
Article
Corrigendum: Occurrence and Characterization of mcr-1 -Positive Escherichia coli Isolated From Food-Producing Animals in Poland, 2011–2016.
Published in:
2019
By:
- Zając, Magdalena;
- Sztromwasser, Paweł;
- Bortolaia, Valeria;
- Leekitcharoenphon, Pimlapas;
- Cavaco, Lina M.;
- Ziȩtek-Barszcz, Anna;
- Hendriksen, Rene S.;
- Wasyl, Dariusz
Publication type:
Correction Notice
Antibiotic-Induced, Increased Conjugative Transfer Is Common to Diverse Naturally Occurring ESBL Plasmids in Escherichia coli.
Published in:
Frontiers in Microbiology, 2019, p. 1, doi. 10.3389/fmicb.2019.02119
By:
- Liu, Gang;
- Bogaj, Karolina;
- Bortolaia, Valeria;
- Olsen, John Elmerdahl;
- Thomsen, Line Elnif
Publication type:
Article
Occurrence and Characterization of mcr-1 -Positive Escherichia coli Isolated From Food-Producing Animals in Poland, 2011–2016.
Published in:
Frontiers in Microbiology, 2019, p. 1, doi. 10.3389/fmicb.2019.01753
By:
- Zając, Magdalena;
- Sztromwasser, Paweł;
- Bortolaia, Valeria;
- Leekitcharoenphon, Pimlapas;
- Cavaco, Lina M.;
- Ziȩtek-Barszcz, Anna;
- Hendriksen, Rene S.;
- Wasyl, Dariusz
Publication type:
Article
Relation between tetR and tetA expression in tetracycline resistant Escherichia coli.
Published in:
BMC Microbiology, 2016, v. 16, p. 1, doi. 10.1186/s12866-016-0649-z
By:
- Møller, Thea S. B.;
- Overgaard, Martin;
- Nielsen, Søren S.;
- Bortolaia, Valeria;
- Sommer, Morten O. A.;
- Guardabassi, Luca;
- Olsen, John E.
Publication type:
Article

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