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Chromosomal location and gene paucity of the male specific region on papaya Y chromosome.
Published in:
Molecular Genetics & Genomics, 2007, v. 278, n. 2, p. 177, doi. 10.1007/s00438-007-0243-z
By:
- Qingyi Yu;
- Shaobin Hou;
- Roman Hobza;
- F. Feltus;
- Xiue Wang;
- Weiwei Jin;
- Rachel Skelton;
- Cornelia Lemke;
- Jimmy Saw;
- Paul Moore;
- Maqsudul Alam;
- Jiming Jiang;
- Andrew Paterson;
- Boris Vyskot
Publication type:
Article
Analysis of papaya BAC end sequences reveals first insights into the organization of a fruit tree genome.
Published in:
Molecular Genetics & Genomics, 2006, v. 276, n. 1, p. 1, doi. 10.1007/s00438-006-0122-z
By:
- Chun Lai;
- Qingyi Yu;
- Shaobin Hou;
- Rachel Skelton;
- Meghan Jones;
- Kanako Lewis;
- Jan Murray;
- Moriah Eustice;
- Peizhu Guan;
- Ricelle Agbayani;
- Paul Moore;
- Ray Ming;
- Gernot Presting
Publication type:
Article
A globin-coupled oxygen sensor from the facultatively alkaliphilic Bacillus halodurans C-125.
Published in:
Extremophiles, 2001, v. 5, n. 5, p. 351, doi. 10.1007/s007920100220
By:
- Hou, Shaobin;
- Belisle, Claude;
- Lam, Summer;
- Piatibratov, Mikhail;
- Sivozhelezov, Victor;
- Takami, Hideto;
- Alam, Maqsudul
Publication type:
Article
Author Correction: The Aphelenchus avenae genome highlights evolutionary adaptation to desiccation.
Published in:
2021
By:
- Wan, Xuehua;
- Saito, Jennifer A.;
- Hou, Shaobin;
- Geib, Scott M.;
- Yuryev, Anton;
- Higa, Lynne M.;
- Womersley, Christopher Z.;
- Alam, Maqsudul
Publication type:
Correction Notice
The Aphelenchus avenae genome highlights evolutionary adaptation to desiccation.
Published in:
Communications Biology, 2021, v. 4, n. 1, p. 1, doi. 10.1038/s42003-021-02778-8
By:
- Wan, Xuehua;
- Saito, Jennifer A.;
- Hou, Shaobin;
- Geib, Scott M.;
- Yuryev, Anton;
- Higa, Lynne M.;
- Womersley, Christopher Z.;
- Alam, Maqsudul
Publication type:
Article
The Aphelenchus avenae genome highlights evolutionary adaptation to desiccation.
Published in:
Communications Biology, 2021, v. 4, n. 1, p. 1, doi. 10.1038/s42003-021-02778-8
By:
- Wan, Xuehua;
- Saito, Jennifer A.;
- Hou, Shaobin;
- Geib, Scott M.;
- Yuryev, Anton;
- Higa, Lynne M.;
- Womersley, Christopher Z.;
- Alam, Maqsudul
Publication type:
Article
Construction of a Sequence-Tagged High-Density Genetic Map of Papaya for Comparative Structural and Evolutionary Genomics in Brassicales.
Published in:
Genetics, 2007, v. 177, n. 4, p. 2481, doi. 10.1534/genetics.107.081463
By:
- Cuixia Chen;
- Qingyi Yu;
- Shaobin Hou;
- Yingjun Li;
- Eustice, Moriah;
- Skelton, Rachel L.;
- Veatch, Olivia;
- Herdes, Rachel E.;
- Diebold, Lauren;
- Saw, Jimmy;
- Yun Feng;
- Wubin Qian;
- Lee Bynum;
- Lei Wang;
- Moore, Paul H.;
- Paull, Robert E.;
- Alam, Maqsudul;
- Ray Ming
Publication type:
Article
Differential Mucosal Microbiome Profiles across Stages of Human Colorectal Cancer.
Published in:
Life (2075-1729), 2021, v. 11, n. 8, p. 831, doi. 10.3390/life11080831
By:
- Zhang, Mingqing;
- Lv, Yongming;
- Hou, Shaobin;
- Liu, Yanfei;
- Wang, Yijia;
- Wan, Xuehua
Publication type:
Article
Low X/Y divergence in four pairs of papaya sex-linked genes.
Published in:
Plant Journal, 2008, v. 53, n. 1, p. 124, doi. 10.1111/j.1365-313X.2007.03329.x
By:
- Qingyi Yu;
- Shaobin Hou;
- Feltus, F. Alex;
- Jones, Meghan R.;
- Murray, Jan E.;
- Veatch, Olivia;
- Lemke, Cornelia;
- Saw, Jimmy H.;
- Moore, Richard C.;
- Thimmapuram, Jyothi;
- Lei Liu;
- Moore, Paul H.;
- Alam, Maqsudul;
- Jiming Jiang;
- Paterson, Andrew H.;
- Ray Ming
Publication type:
Article
Genomic sequencing is required for identification of tuberculosis transmission in Hawaii.
Published in:
2018
By:
- Koster, Kent J.;
- Qian, Lishi;
- Douglas, James T.;
- Largen, Angela;
- Drees, Kevin P.;
- Foster, Jeffrey T.;
- Desmond, Ed;
- Wan, Xuehua;
- Hou, Shaobin
Publication type:
journal article
Complete genome sequence of the thermophilic Thermus sp. CCB_US3_UF1 from a hot spring in Malaysia.
Published in:
Standards in Genomic Sciences, 2015, v. 10, n. 1, p. 1, doi. 10.1186/s40793-015-0053-6
By:
- Teh, Beng;
- Lau, Nyok-Sean;
- Ng, Fui;
- Abdul Rahman, Ahmad;
- Wan, Xuehua;
- Saito, Jennifer;
- Hou, Shaobin;
- Teh, Aik-Hong;
- Najimudin, Nazalan;
- Alam, Maqsudul
Publication type:
Article
The Genomic Blueprint of Salmonella enterica subspecies enterica serovar Typhi P-stx-12.
Published in:
Standards in Genomic Sciences, 2013, v. 7, n. 3, p. 483, doi. 10.4056/sigs.3286690
By:
- Su Yean Ong;
- Pratap, Chandra Bhan;
- Xuehua Wan;
- Shaobin Hou;
- Abdul Rahman, Ahmad Yamin;
- Saito, Jennifer A.;
- Nath, Gopal;
- Alam, Maqsudul
Publication type:
Article
Cultivation and Complete Genome Sequencing of <i>Gloeobacter kilaueensis</i> sp. nov., from a Lava Cave in Kīlauea Caldera, Hawai'i.
Published in:
PLoS ONE, 2013, v. 8, n. 10, p. 1, doi. 10.1371/journal.pone.0076376
By:
- Saw, Jimmy H. W.;
- Schatz, Michael;
- Brown, Mark V.;
- Kunkel, Dennis D.;
- Foster, Jamie S.;
- Shick, Harry;
- Christensen, Stephanie;
- Hou, Shaobin;
- Wan, Xuehua;
- Donachie, Stuart P.
Publication type:
Article
Eubacterium rectale contributes to colorectal cancer initiation via promoting colitis.
Published in:
Gut Pathogens, 2021, v. 13, n. 1, p. 1, doi. 10.1186/s13099-020-00396-z
By:
- Wang, Yijia;
- Wan, Xuehua;
- Wu, Xiaojing;
- Zhang, Chunze;
- Liu, Jun;
- Hou, Shaobin
Publication type:
Article
A physical map of the papaya genome with integrated genetic map and genome sequence.
Published in:
BMC Genomics, 2009, v. 10, p. 371, doi. 10.1186/1471-2164-10-371
By:
- Qingyi Yu;
- Tong, Eric;
- Skelton, Rachel L.;
- Bowers, John E.;
- Jones, Meghan R.;
- Murray, Jan E.;
- Shaobin Hou;
- Peizhu Guan;
- Acob, Ricelle A.;
- Ming-Cheng Luo;
- Moore, Paul H.;
- Alam, Maqsudul;
- Paterson, Andrew H.;
- Ray Ming
Publication type:
Article
The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus).
Published in:
Nature, 2008, v. 452, n. 7190, p. 991, doi. 10.1038/nature06856
By:
- Ming, Ray;
- Hou, Shaobin;
- Yun Feng;
- Qingyi Yu;
- Dionne-Laporte, Alexandre;
- Saw, Jimmy H.;
- Senin, Pavel;
- Wei Wang;
- Ly, Benjamin V.;
- Lewis, Kanako L. T.;
- Salzberg, Steven L.;
- Lu Feng;
- Jones, Meghan R.;
- Skelton, Rachel L.;
- Murray, Jan E.;
- Chen, Cuixia;
- Wubin Qian;
- Junguo Shen;
- Du, Peng;
- Eustice, Moriah
Publication type:
Article
Methane oxidation by an extremely acidophilic bacterium of the phylum Verrucomicrobia.
Published in:
Nature, 2007, v. 450, n. 7171, p. 879, doi. 10.1038/nature06411
By:
- Dunfield, Peter F.;
- Yuryev, Anton;
- Senin, Pavel;
- Smirnova, Angela V.;
- Stott, Matthew B.;
- Shaobin Hou;
- Binh Ly;
- Saw, Jimmy H.;
- Zhemin Zhou;
- Yan Ren;
- Jianmei Wang;
- Mountain, Bruce W.;
- Crowe, Michelle A.;
- Weatherby, Tina M.;
- Bodelier, Paul L. E.;
- Liesack, Werner;
- Lu Feng;
- Lei Wang;
- Alam, Maqsudul
Publication type:
Article
Isolation of novel bacteria, including a candidate division, from geothermal soils in New Zealand.
Published in:
Environmental Microbiology, 2008, v. 10, n. 8, p. 2030, doi. 10.1111/j.1462-2920.2008.01621.x
By:
- Stott, Matthew B.;
- Crowe, Michelle A.;
- Mountain, Bruce W.;
- Smirnova, Angela V.;
- Hou, Shaobin;
- Alam, Maqsudul;
- Dunfield, Peter F.
Publication type:
Article
Analyses of Potential Driver and Passenger Bacteria in Human Colorectal Cancer.
Published in:
Cancer Management & Research, 2020, v. 12, p. 11553, doi. 10.2147/CMAR.S275316
By:
- Wang, Yijia;
- Zhang, Chunze;
- Hou, Shaobin;
- Wu, Xiaojing;
- Liu, Jun;
- Wan, Xuehua
Publication type:
Article
Complete genome sequence of the extremely acidophilic methanotroph isolate V4, Methylacidiphilum infernorum, a representative of the bacterial phylum Verrucomicrobia.
Published in:
Biology Direct, 2008, v. 3, p. 1, doi. 10.1186/1745-6150-3-26
By:
- Hou, Shaobin;
- Makarova, Kira S.;
- Saw, Jimmy H. W.;
- Senin, Pavel;
- Ly, Benjamin V.;
- Zhemin Zhou;
- Yan Ren;
- Jianmei Wang;
- Galperin, Michael Y.;
- Omelchenko, Marina V.;
- Wolf, Yuri I.;
- Yutin, Natalya;
- Koonin, Eugene V.;
- Stott, Matthew B.;
- Mountain, Bruce W.;
- Crowe, Michelle A.;
- Smirnova, Angela V.;
- Dunfield, Peter F.;
- Lu Feng;
- Lei Wang
Publication type:
Article
Whole genome SNP analysis suggests unique virulence factor differences of the Beijing and Manila families of Mycobacterium tuberculosis found in Hawaii.
Published in:
PLoS ONE, 2018, v. 13, n. 7, p. 1, doi. 10.1371/journal.pone.0201146
By:
- Koster, Kent;
- Largen, Angela;
- Foster, Jeffrey T.;
- Drees, Kevin P.;
- Qian, Lishi;
- Desmond, Edward P.;
- Wan, Xuehua;
- Hou, Shaobin;
- Douglas, James T.
Publication type:
Article
Globin-coupled sensors and protoglobins share a common signaling mechanism
Published in:
FEBS Letters, 2008, v. 582, n. 13, p. 1840, doi. 10.1016/j.febslet.2008.05.004
By:
- Saito, Jennifer A.;
- Wan, Xuehua;
- Lee, Kit Shan;
- Hou, Shaobin;
- Alam, Maqsudul
Publication type:
Article
The diversity of globin-coupled sensors
Published in:
FEBS Letters, 2003, v. 552, n. 2/3, p. 99, doi. 10.1016/S0014-5793(03)00923-2
By:
- Freitas, Tracey Allen K.;
- Hou, Shaobin;
- Alam, Maqsudul
Publication type:
Article
Characterizing the developmental transcriptome of the oriental fruit fly, Bactrocera dorsalis (Diptera: Tephritidae) through comparative genomic analysis with Drosophila melanogaster utilizing modENCODE datasets.
Published in:
BMC Genomics, 2014, v. 15, n. 1, p. 942, doi. 10.1186/1471-2164-15-942
By:
- Geib, Scott M.;
- Calla, Bernarda;
- Hall, Brian;
- Shaobin Hou;
- Manoukis, Nicholas C.
Publication type:
Article
A genomic perspective to assessing quality of mass-reared SIT flies used in Mediterranean fruit fly (Ceratitis capitata) eradication in California.
Published in:
BMC Genomics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2164-15-98
By:
- Calla, Bernarda;
- Hall, Brian;
- Shaobin Hou;
- Geib, Scott M.
Publication type:
Article
Draft genome sequence of the rubber tree Hevea brasiliensis.
Published in:
BMC Genomics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2164-14-75
By:
- Rahman, Ahmad Yamin Abdul;
- Usharraj, Abhilash O;
- Misra, Biswapriya B;
- Thottathil, Gincy P;
- Jayasekaran, Kandakumar;
- Feng, Yun;
- Hou, Shaobin;
- Ong, Su Yean;
- Ng, Fui Ling;
- Lee, Ling Sze;
- Tan, Hock Siew;
- Sakaff, Muhd Khairul Luqman Muhd;
- Teh, Beng Soon;
- Khoo, Bee Feong;
- Badai, Siti Suriawati;
- Aziz, Nurohaida Ab;
- Yuryev, Anton;
- Knudsen, Bjarne;
- Dionne-Laporte, Alexandre;
- Mchunu, Nokuthula P
Publication type:
Article
Tools to kill: Genome of one of the most destructive plant pathogenic fungi Macrophomina phaseolina.
Published in:
BMC Genomics, 2012, v. 13, n. 1, p. 493, doi. 10.1186/1471-2164-13-493
By:
- Islam, Shahidul;
- Haque, Samiul;
- Moinul Islam, Mohammad;
- Mannan Emdad, Emdadul;
- Halim, Abdul;
- Mosaddeque Hossen, Quazi;
- Hossain, Zakir;
- Ahmed, Borhan;
- Rahim, Sifatur;
- Rahman, Sharifur;
- Alam, Monjurul;
- Shaobin Hou;
- Xuehua Wan;
- Saito, Jennifer A.;
- Alam, Maqsudul
Publication type:
Article
Myoglobin-like aerotaxis transducers in Archaea and Bacteria.
Published in:
Nature, 2000, v. 403, n. 6769, p. 540, doi. 10.1038/35000570
By:
- Hou, Shaobin;
- Larsen, Randy W.;
- Boudko, Dmitri;
- Riley, Charles W.;
- Karatan, Ece;
- Zimmer, Mike;
- Ordal, George W.;
- Alam, Maqsudul
Publication type:
Article
The importance of conserved amino acids in heme-based globin-coupled diguanylate cyclases.
Published in:
PLoS ONE, 2017, v. 12, n. 8, p. 1, doi. 10.1371/journal.pone.0182782
By:
- Wan, Xuehua;
- Saito, Jennifer A.;
- Newhouse, James S.;
- Hou, Shaobin;
- Alam, Maqsudul
Publication type:
Article
Genomic analyses of the ancestral Manila family of Mycobacterium tuberculosis.
Published in:
PLoS ONE, 2017, v. 12, n. 4, p. 1, doi. 10.1371/journal.pone.0175330
By:
- Wan, Xuehua;
- Koster, Kent;
- Qian, Lishi;
- Desmond, Edward;
- Brostrom, Richard;
- Hou, Shaobin;
- Douglas, James T.
Publication type:
Article

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