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Cervicovaginal Human Papillomavirus Genomes, Microbiota Composition and Cytokine Concentrations in South African Adolescents.
Published in:
Viruses (1999-4915), 2023, v. 15, n. 3, p. 758, doi. 10.3390/v15030758
By:
- Happel, Anna-Ursula;
- Balle, Christina;
- Havyarimana, Enock;
- Brown, Bryan;
- Maust, Brandon S.;
- Feng, Colin;
- Yi, Byung H.;
- Gill, Katherine;
- Bekker, Linda-Gail;
- Passmore, Jo-Ann S.;
- Jaspan, Heather B.;
- Varsani, Arvind
Publication type:
Article
Presence and Persistence of Putative Lytic and Temperate Bacteriophages in Vaginal Metagenomes from South African Adolescents.
Published in:
Viruses (1999-4915), 2021, v. 13, n. 12, p. 2341, doi. 10.3390/v13122341
By:
- Happel, Anna-Ursula;
- Balle, Christina;
- Maust, Brandon S.;
- Konstantinus, Iyaloo N.;
- Gill, Katherine;
- Bekker, Linda-Gail;
- Froissart, Rémy;
- Passmore, Jo-Ann;
- Karaoz, Ulas;
- Varsani, Arvind;
- Jaspan, Heather
Publication type:
Article
Multistage Genomewide Association Study Identifies a Locus at 1q41 Associated with Rate of HIV-1 Disease Progression to Clinical AIDS.
Published in:
Journal of Infectious Diseases, 2010, v. 201, n. 4, p. 618, doi. 10.1086/649842
By:
- Herbeck, Joshua T.;
- Gottlieb, Geoffrey S.;
- Winkler, Cheryl A.;
- Nelson, George W.;
- An, Ping;
- Maust, Brandon S.;
- Wong, Kim G.;
- Troyer, Jennifer L.;
- Goedert, James J.;
- Kessing, Bailey D.;
- Detels, Roger;
- Wolinsky, Steven M.;
- Martinson, Jeremy;
- Buchbinder, Susan;
- Kirk, Gregory D.;
- Jacobson, Lisa P.;
- Margolick, Joseph B.;
- Kaslow, Richard A.;
- O'Brien, Stephen J.;
- Mullins1, James I.
Publication type:
Article
Increased HIV-1 vaccine efficacy against viruses with genetic signatures in Env V2.
Published in:
Nature, 2012, v. 490, n. 7420, p. 417, doi. 10.1038/nature11519
By:
- Rolland, Morgane;
- Edlefsen, Paul T.;
- Larsen, Brendan B.;
- Tovanabutra, Sodsai;
- Sanders-Buell, Eric;
- Hertz, Tomer;
- deCamp, Allan C.;
- Carrico, Chris;
- Menis, Sergey;
- Magaret, Craig A.;
- Ahmed, Hasan;
- Juraska, Michal;
- Chen, Lennie;
- Konopa, Philip;
- Nariya, Snehal;
- Stoddard, Julia N.;
- Wong, Kim;
- Zhao, Hong;
- Deng, Wenjie;
- Maust, Brandon S.
Publication type:
Article
Indel and Carryforward Correction (ICC): a new analysis approach for processing 454 pyrosequencing data.
Published in:
Bioinformatics, 2013, v. 29, n. 19, p. 2402, doi. 10.1093/bioinformatics/btt434
By:
- Deng, Wenjie;
- Maust, Brandon S.;
- Westfall, Dylan H.;
- Chen, Lennie;
- Zhao, Hong;
- Larsen, Brendan B.;
- Iyer, Shyamala;
- Liu, Yi;
- Mullins, James I.
Publication type:
Article
HIV-1 over time: fitness loss or robustness gain?
Published in:
2007
By:
- Rolland, Morgane;
- Brander, Christian;
- Nickle, David C.;
- Herbeck, Joshua T.;
- Gottlieb, Geoffrey S.;
- Campbell, Mary S.;
- Maust, Brandon S.;
- Mullins, James I.
Publication type:
Letter
CD8 and CD4 Epitope Predictions in RV144: No Strong Evidence of a T-Cell Driven Sieve Effect in HIV-1 Breakthrough Sequences from Trial Participants.
Published in:
PLoS ONE, 2014, v. 9, n. 10, p. 1, doi. 10.1371/journal.pone.0111334
By:
- Dommaraju, Kalpana;
- Kijak, Gustavo;
- Carlson, Jonathan M.;
- Larsen, Brendan B.;
- Tovanabutra, Sodsai;
- Geraghty, Dan E.;
- Deng, Wenjie;
- Maust, Brandon S.;
- Edlefsen, Paul T.;
- Sanders-Buell, Eric;
- Ratto-Kim, Silvia;
- deSouza, Mark S.;
- Rerks-Ngarm, Supachai;
- Nitayaphan, Sorachai;
- Pitisuttihum, Punnee;
- Kaewkungwal, Jaranit;
- O'Connell, Robert J.;
- Robb, Merlin L.;
- Michael, Nelson L.;
- Mullins, James I.
Publication type:
Article
Improved Detection of Rare HIV-1 Variants using 454 Pyrosequencing.
Published in:
PLoS ONE, 2013, v. 8, n. 10, p. 1, doi. 10.1371/journal.pone.0076502
By:
- Larsen, Brendan B.;
- Chen, Lennie;
- Maust, Brandon S.;
- Kim, Moon;
- Zhao, Hong;
- Deng, Wenjie;
- Westfall, Dylan;
- Beck, Ingrid;
- Frenkel, Lisa M.;
- Mullins, James I.
Publication type:
Article
Amino-Acid Co-Variation in HIV-1 Gag Subtype C: HLA-Mediated Selection Pressure and Compensatory Dynamics.
Published in:
PLoS ONE, 2010, v. 5, n. 9, p. 1, doi. 10.1371/journal.pone.0012463
By:
- Rolland, Morgane;
- Carlson, Jonathan M.;
- Manocheewa, Siriphan;
- Swain, J. Victor;
- Lanxon-Cookson, Erinn;
- Wenjie Deng;
- Rousseau, Christine M.;
- Raugi, Dana N.;
- Learn, Gerald H.;
- Maust, Brandon S.;
- Coovadia, Hoosen;
- Ndung'u, Thumbi;
- Goulder, Philip J. R.;
- Walker, Bruce D.;
- Brander, Christian;
- Heckerman, David E.;
- Mullins, James I.
Publication type:
Article
Genetic impact of vaccination on breakthrough HIV-1 sequences from the STEP trial.
Published in:
Nature Medicine, 2011, v. 17, n. 3, p. 366, doi. 10.1038/nm.2316
By:
- Rolland, Morgane;
- Tovanabutra, Sodsai;
- deCamp, Allan C.;
- Frahm, Nicole;
- Gilbert, Peter B.;
- Sanders-Buell, Eric;
- Heath, Laura;
- Magaret, Craig A.;
- Bose, Meera;
- Bradfield, Andrea;
- O'Sullivan, Annemarie;
- Crossler, Jacqueline;
- Jones, Teresa;
- Nau, Marty;
- Kim Wong;
- Hong Zhao;
- Raugi, Dana N.;
- Sorensen, Stephanie;
- Stoddard, Julia N.;
- Maust, Brandon S.
Publication type:
Article

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