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- Title
IMA genome-F18: The re-identification of Penicillium genomes available in NCBI and draft genomes for Penicillium species from dry cured meat, Penicilliumbiforme, P. brevicompactum, P. solitum, and P. cvjetkovicii, Pewenomyces kutranfy, Pew. lalenivora, Pew. tapulicola, Pew. kalosus, Teratosphaeria carnegiei, and Trichoderma atroviride SC1
- Authors
Visagie, Cobus M.; Magistà, Donato; Ferrara, Massimo; Balocchi, Felipe; Duong, Tuan A.; Eichmeier, Ales; Gramaje, David; Aylward, Janneke; Baker, Scott E.; Barnes, Irene; Calhoun, Sara; De Angelis, Maria; Frisvad, Jens C.; Hakalova, Eliska; Hayes, Richard D.; Houbraken, Jos; Grigoriev, Igor V.; LaButti, Kurt; Leal, Catarina; Lipzen, Anna
- Abstract
10.1038/s41586-018-0043-0 86 Li WC, Lin TC, Chen CL, Liu HC, Lin HN et al (2021) Complete genome sequences and genome-wide characterization of Trichoderma biocontrol agents provide new insights into their evolution and variation in genome organization, sexual development, and fungal-plant interactions. lalenivora, Pew. tapulicola, Pew. kalosus, Teratosphaeria carnegiei, and Trichoderma atroviride SC1 A similar trend was observed for genome size (Table 7), where I Pew. kutranfy i (CMW54240) had the smallest genome size (29.59 Mb; 8,097 genes), while the two isolates of I Pew. lalenivora i (CMW54250 and CMW56868) had the largest genomes (30.37 Mb; 9,284 genes and 31.66 Mb; 10,432 genes, respectively). Of the misidentified genomes, five belong to different genera including: GCA 023625675, which we believe to be a I Candida i species; GCA 023627405, which belongs to I Aspergillus ustus i ; GCA 011750695, which belongs to I Talaromyces minnesotensis i ; and GCA 002382835 and GCA 002382855, which belong to I Talaromyces pinophilus i .
- Subjects
HORIZONTAL gene transfer; GENOMES; SPECIES; CANKER (Plant disease); BIOLOGICAL classification; MICROSATELLITE repeats; TRICHODERMA; APPLE blue mold; OCHRATOXINS
- Publication
IMA Fungus, 2023, Vol 14, Issue 1, p1
- ISSN
2210-6340
- Publication type
Article
- DOI
10.1186/s43008-023-00121-w