OpenURL Connection Search

Select item for more details and to access through your institution.

IslandViewer 4: expanded prediction of genomic islands for larger-scale datasets.
Published in:
Nucleic Acids Research, 2017, v. 45, n. W1, p. W30, doi. 10.1093/nar/gkx343
By:
- Bertelli, Claire;
- Laird, Matthew R.;
- Williams, Kelly P.;
- Lau, Britney Y.;
- Hoad, Gemma;
- Winsor, Geoffrey L.;
- Brinkman, Fiona SL.
Publication type:
Article
Ensembl 2017.
Published in:
Nucleic Acids Research, 2017, v. 45, n. D1, p. D365, doi. 10.1093/nar/gkw1104
By:
- Aken, Bronwen L.;
- Achuthan, Premanand;
- Akanni, Wasiu;
- Amode, M. Ridwan;
- Bernsdorff, Friederike;
- Bhai, Jyothish;
- Billis, Konstantinos;
- Carvalho-Silva, Denise;
- Cummins, Carla;
- Clapham, Peter;
- Gil, Laurent;
- Giron, Carlos Garcia;
- Gordon, Leo;
- Hourlie, Thibaut;
- Hunt, Sarah E.;
- Janacek, Sophie H.;
- Juettemann, Thomas;
- Keenan, Stephen;
- Laird, Matthew R.;
- Lavidas, Ilias
Publication type:
Article
PSORTdb: expanding the bacteria and archaea protein subcellular localization database to better reflect diversity in cell envelope structures.
Published in:
Nucleic Acids Research, 2016, v. 44, n. 1, p. D663, doi. 10.1093/nar/gkv1271
By:
- Peabody, Michael A.;
- Laird, Matthew R.;
- Vlasschaert, Caitlyn;
- Lo, Raymond;
- Brinkman, Fiona S. L.
Publication type:
Article
IslandViewer 3: more flexible, interactive genomic island discovery, visualization and analysis.
Published in:
Nucleic Acids Research, 2015, v. 43, n. W1, p. W104, doi. 10.1093/nar/gkv401
By:
- Dhillon, Bhavjinder K.;
- Laird, Matthew R.;
- Shay, Julie A.;
- Winsor, Geoffrey L.;
- Lo, Raymond;
- Nizam, Fazmin;
- Pereira, Sheldon K.;
- Waglechner, Nicholas;
- McArthur, Andrew G.;
- Langille, Morgan G. I.;
- Brinkman, Fiona S. L.
Publication type:
Article
IslandViewer update: improved genomic island discovery and visualization.
Published in:
Nucleic Acids Research, 2013, v. 41, p. W129, doi. 10.1093/nar/gkt394
By:
- Dhillon, Bhavjinder K.;
- Chiu, Terry A.;
- Laird, Matthew R.;
- Langille, Morgan G. I.;
- Brinkman, Fiona S. L.
Publication type:
Article
GenomeD3Plot: a library for rich, interactive visualizations of genomic data in web applications.
Published in:
Bioinformatics, 2015, v. 31, n. 20, p. 3348, doi. 10.1093/bioinformatics/btv376
By:
- Laird, Matthew R.;
- Langille, Morgan G. I.;
- Brinkman, Fiona S. L.
Publication type:
Article
InnateDB: facilitating systems-level analyses of the mammalian innate immune response.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.55
By:
- Lynn, David J;
- Winsor, Geoffrey L;
- Chan, Calvin;
- Richard, Nicolas;
- Laird, Matthew R;
- Barsky, Aaron;
- Gardy, Jennifer L;
- Roche, Fiona M;
- Chan, Timothy H W;
- Shah, Naisha;
- Lo, Raymond;
- Naseer, Misbah;
- Que, Jaimmie;
- Yau, Melissa;
- Acab, Michael;
- Tulpan, Dan;
- Whiteside, Matthew D;
- Chikatamarla, Avinash;
- Mah, Bernadette;
- Munzner, Tamara
Publication type:
Article
MicrobeDB: a locally maintainable database of microbial genomic sequences.
Published in:
Bioinformatics, 2012, v. 28, n. 14, p. 1947, doi. 10.1093/bioinformatics/bts273
By:
- Langille, Morgan G. I.;
- Laird, Matthew R.;
- Hsiao, William W. L.;
- Chiu, Terry A.;
- Eisen, Jonathan A.;
- Brinkman, Fiona S. L.
Publication type:
Article
PSORTb 3.0: improved protein subcellular localization prediction with refined localization subcategories and predictive capabilities for all prokaryotes.
Published in:
Bioinformatics, 2010, v. 26, n. 13, p. 1608, doi. 10.1093/bioinformatics/btq249
By:
- Yu, Nancy Y.;
- Wagner, James R.;
- Laird, Matthew R.;
- Melli, Gabor;
- Rey, Sébastien;
- Lo, Raymond;
- Phuong Dao;
- Sahinalp, S. Cenk;
- Ester, Martin;
- Foster, Leonard J.;
- Brinkman, Fiona S. L.
Publication type:
Article
Improving the specificity of high-throughput ortholog prediction.
Published in:
BMC Bioinformatics, 2006, v. 7, p. 270, doi. 10.1186/1471-2105-7-270
By:
- Fulton, Debra L;
- Li, Yvonne Y;
- Laird, Matthew R;
- Horsman, Benjamin GS;
- Roche, Fiona M;
- Brinkman, Fiona SL
Publication type:
Article
OrtholugeDB: a bacterial and archaeal orthology resource for improved comparative genomic analysis.
Published in:
Nucleic Acids Research, 2013, v. 41, p. D366, doi. 10.1093/nar/gks1241
By:
- Whiteside, Matthew D.;
- Winsor, Geoffrey L.;
- Laird, Matthew R.;
- Brinkman, Fiona S. L.
Publication type:
Article
InnateDB: systems biology of innate immunity and beyond--recent updates and continuing curation.
Published in:
Nucleic Acids Research, 2013, v. 41, p. D1228, doi. 10.1093/nar/gks1147
By:
- Breuer, Karin;
- Foroushani, Amir K.;
- Laird, Matthew R.;
- Chen, Carol;
- Sribnaia, Anastasia;
- Lo, Raymond;
- Winsor, Geoffrey L.;
- Hancock, Robert E. W.;
- Brinkman, Fiona S. L.;
- Lynn, David J.
Publication type:
Article
PSORTdb—an expanded, auto-updated, user-friendly protein subcellular localization database for Bacteria and Archaea.
Published in:
Nucleic Acids Research, 2011, v. 39, n. suppl_1, p. D241
By:
- Yu, Nancy Y.;
- Laird, Matthew R.;
- Spencer, Cory;
- Brinkman, Fiona S.L.
Publication type:
Article
PSORTdb: a protein subcellular localization database for bacteria.
Published in:
Nucleic Acids Research, 2005, v. 33, n. suppl 1, p. d164
By:
- Rey, Sébastien;
- Acab, Michael;
- Gardy, Jennifer L.;
- Laird, Matthew R.;
- deFays, Katalin;
- Lambert, Christophe;
- Brinkman, Fiona S. L.
Publication type:
Article
Curating the innate immunity interactome.
Published in:
BMC Systems Biology, 2010, v. 4, p. 117, doi. 10.1186/1752-0509-4-117
By:
- Lynn, David J.;
- Chan, Calvin;
- Naseer, Misbah;
- Yau, Melissa;
- Lo, Raymond;
- Sribnaia, Anastasia;
- Ring, Giselle;
- Que, Jaimmie;
- Wee, Kathleen;
- Winsor, Geoffrey L.;
- Laird, Matthew R.;
- Breuer, Karin;
- Foroushani, Amir K.;
- Brinkman, Fiona S. L.;
- Hancock, Robert E. W.
Publication type:
Article

Found: 15