Found: 24
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PureCN: copy number calling and SNV classification using targeted short read sequencing.
- Published in:
- Source Code for Biology & Medicine, 2016, v. 11, p. 1, doi. 10.1186/s13029-016-0060-z
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- Article
DiffSplice: the genome-wide detection of differential splicing events with RNA-seq.
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- Nucleic Acids Research, 2013, v. 41, n. 2, p. e39, doi. 10.1093/nar/gks1026
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- Article
MapSplice: Accurate mapping of RNA-seq reads for splice junction discovery.
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- Nucleic Acids Research, 2010, v. 38, n. 18, p. e178, doi. 10.1093/nar/gkq622
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- Article
Mapping duplicated sequences.
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- Nature Biotechnology, 2009, v. 27, n. 11, p. 1001, doi. 10.1038/nbt1109-1001
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- Article
A conditional transposon-based insertional mutagenesis screen for genes associated with mouse hepatocellular carcinoma.
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- Nature Biotechnology, 2009, v. 27, n. 3, p. 264, doi. 10.1038/nbt.1526
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- Article
High-throughput screening using patient-derived tumor xenografts to predict clinical trial drug response.
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- Nature Medicine, 2015, v. 21, n. 11, p. 1318, doi. 10.1038/nm.3954
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- Article
Studying clonal dynamics in response to cancer therapy using high-complexity barcoding.
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- Nature Medicine, 2015, v. 21, n. 5, p. 440, doi. 10.1038/nm.3841
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- Article
Subtype-specific genomic alterations define new targets for soft-tissue sarcoma therapy.
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- Nature Genetics, 2010, v. 42, n. 8, p. 715, doi. 10.1038/ng.619
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- Article
High-resolution mapping of copy-number alterations with massively parallel sequencing.
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- Nature Methods, 2009, v. 6, n. 1, p. 99, doi. 10.1038/nmeth.1276
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- Article
Flexible promoter architecture requirements for coactivator recruitment.
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- BMC Molecular Biology, 2006, v. 7, p. 16, doi. 10.1186/1471-2199-7-16
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- Article
Integrating Prior Knowledge in Multiple Testing under Dependence with Applications to Detecting Differential DNA Methylation.
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- Biometrics, 2012, v. 68, n. 3, p. 774, doi. 10.1111/j.1541-0420.2011.01730.x
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- Article
Elucidating therapeutic molecular targets in premenopausal Asian women with recurrent breast cancers.
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- NPJ Breast Cancer, 2018, v. 4, n. 1, p. N.PAG, doi. 10.1038/s41523-018-0070-x
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- Article
Suppression of lung adenocarcinoma progression by Nkx2-1.
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- Nature, 2011, v. 473, n. 7345, p. 101, doi. 10.1038/nature09881
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- Article
Characterizing the cancer genome in lung adenocarcinoma.
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- Nature, 2007, v. 450, n. 7171, p. 893, doi. 10.1038/nature06358
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- Article
A community‐based lung cancer rapid tissue donation protocol provides high‐quality drug‐resistant specimens for proteogenomic analyses.
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- Cancer Medicine, 2020, v. 9, n. 1, p. 225, doi. 10.1002/cam4.2670
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- Article
Parallel single-cell and bulk transcriptome analyses reveal key features of the gastric tumor microenvironment.
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- Genome Biology, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s13059-022-02828-2
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- Article
Conservation and Evolution of Cis-Regulatory Systems in Ascomycete Fungi.
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- PLoS Biology, 2004, v. 2, n. 12, p. 2202, doi. 10.1371/journal.pbio.0020398
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- Article
Conservation and Evolution of Cis-Regulatory Systems in Ascomycete Fungi.
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- PLoS Biology, 2004, v. 2, n. 11, p. 1, doi. 10.1371/journal.pbio.0020398
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- Publication type:
- Article
High-resolution analysis of genetic alterations in small bowel carcinoid tumors reveals areas of recurrent amplification and loss.
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- Genes, Chromosomes & Cancer, 2008, v. 47, n. 7, p. 591, doi. 10.1002/gcc.20561
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- Publication type:
- Article
Visualizing associations between genome sequences and gene expression data using genome-mean expression profiles.
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- Bioinformatics, 2001, v. 17, p. 49, doi. 10.1093/bioinformatics/17.suppl_1.s49
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- Article
Targeted next generation sequencing identifies clinically actionable mutations in patients with melanoma.
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- Pigment Cell & Melanoma Research, 2014, v. 27, n. 4, p. 653, doi. 10.1111/pcmr.12238
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- Article
Position specific variation in the rate of evolution in transcription factor binding sites.
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- BMC Evolutionary Biology, 2003, v. 3, p. 19, doi. 10.1186/1471-2148-3-19
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- Article
FDM: a graph-based statistical method to detect differential transcription using RNA-seq data.
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- Bioinformatics, 2011, v. 27, n. 19, p. 2633, doi. 10.1093/bioinformatics/btr458
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- Article
A probabilistic framework for aligning paired-end RNA-seq data.
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- Bioinformatics, 2010, v. 26, n. 16, p. 1950, doi. 10.1093/bioinformatics/btq336
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- Article