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- Title
Complete genome sequence of a new strain of Lagenaria siceraria endornavirus from China.
- Authors
Peng, Xiaoqin; Pan, Hui; Muhammad, Arif; An, Hongliu; Fang, Shouguo; Li, Weimin; Zhang, Songbai
- Abstract
An RNA virus tentatively named Lagenaria siceraria endornavirus-Hubei (LsEV-HuB) was isolated from <italic>Lagenaria siceraria</italic> var. <italic>hispida</italic> in Hubei, China. The LsEV-HuB genome consists of 15,098 bp and contains a single open reading frame (ORF) encoding a large protein with several conserved domains, including one helicase domain, one glycosyltransferase domain, two capsular polysaccharide synthesis protein (CPS) domains, and one RNA-dependent RNA polymerase (RdRp) domain. LsEV-HuB has nucleotide and amino acid sequence identities of 72.96% and 77.95%, respectively, to Lagenaria siceraria endornavirus-California (LsEV-CA), the closest relative of LsEV-HuB.
- Subjects
NUCLEOTIDE sequencing; RNA virus infections; LAGENARIA siceraria; ENDORNAVIRIDAE; PLANT genetics; GENETICS
- Publication
Archives of Virology, 2018, Vol 163, Issue 3, p805
- ISSN
0304-8608
- Publication type
Article
- DOI
10.1007/s00705-017-3664-y