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- Title
STUDIES ON CYTOCHROME C OXIDASE SUBUNIT II GENE IN Salmo trutta caspius.
- Authors
REZAEI, Abolhasan
- Abstract
Cytochrome C oxidase subunit II in Salmo trutta caspius were sequenced and deposited in Genbank, accession number (LC 011387). The full length of CO II gene has 703 bp. In this study full length of CO II gene were compared between S. t. caspius, Salmo trutta, Salmo salar and Salmo trutta fario by NCBI Network system-BLAST program and DNAMAN computer program. Between S. t. caspius and S. trutta were found a high homology in nucleotides when compared by BLAST program and 100% homology were found about amino acids when compared by DNAMAN program. CO II gene in S. t. caspius also were analysed with S. trutta, S. salar and S. t. fario. A high homology (99%) was found between them when compared by BLAST program for nucleotides. About amino acids were compared with DNAMAN program, results were showed however between sequences of salmonids have been high homology but the location of mutation was important. Between S. t. caspius, S. salar and S. t. fario codon of methionine (start codon) were replaced. In generally between S. t. caspius and other salmonids that cited above have been low SNPs, hence there were high homology between COII genes in salmonid species.
- Subjects
BROWN trout; ATLANTIC salmon
- Publication
Banat's Journal of Biotechnology, 2015, Vol 6, Issue 11, p5
- ISSN
2068-4673
- Publication type
Article
- DOI
10.7904/2068-4738-VI(11)-5