Found: 31
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Strategies to improve the performance of rare variant association studies by optimizing the selection of controls.
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- Bioinformatics, 2015, v. 31, n. 22, p. 3577, doi. 10.1093/bioinformatics/btv457
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A Bayesian approach for structure learning in oscillating regulatory networks.
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- Bioinformatics, 2015, v. 31, n. 22, p. 3617, doi. 10.1093/bioinformatics/btv414
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Designing alternative splicing RNA-seq studies. Beyond generic guidelines.
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- Bioinformatics, 2015, v. 31, n. 22, p. 3631, doi. 10.1093/bioinformatics/btv436
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Canonical, stable, general mapping using context schemes.
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- Bioinformatics, 2015, v. 31, n. 22, p. 3569, doi. 10.1093/bioinformatics/btv435
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Roary: rapid large-scale prokaryote pan genome analysis.
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- Bioinformatics, 2015, v. 31, n. 22, p. 3691, doi. 10.1093/bioinformatics/btv421
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Alternative preprocessing of RNA-Sequencing data in The Cancer Genome Atlas leads to improved analysis results.
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- Bioinformatics, 2015, v. 31, n. 22, p. 3666, doi. 10.1093/bioinformatics/btv377
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GeneCOST: a novel scoring-based prioritization framework for identifying disease causing genes.
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- Bioinformatics, 2015, v. 31, n. 22, p. 3715, doi. 10.1093/bioinformatics/btv424
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BackCLIP: a tool to identify common background presence in PAR-CLIP datasets.
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- Bioinformatics, 2015, v. 31, n. 22, p. 3703, doi. 10.1093/bioinformatics/btv442
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SNPGenie: estimating evolutionary parameters to detect natural selection using pooled next-generation sequencing data.
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- Bioinformatics, 2015, v. 31, n. 22, p. 3709, doi. 10.1093/bioinformatics/btv449
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Identifying novel associations between small molecules and miRNAs based on integrated molecular networks.
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- Bioinformatics, 2015, v. 31, n. 22, p. 3638, doi. 10.1093/bioinformatics/btv417
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The application of a novel 'rising activity, multi-level mixed effects, indicator emphasis' (RAMMIE) method for syndromic surveillance in England.
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- Bioinformatics, 2015, v. 31, n. 22, p. 3660, doi. 10.1093/bioinformatics/btv418
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SynLinker: an integrated system for designing linkers and synthetic fusion proteins.
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- Bioinformatics, 2015, v. 31, n. 22, p. 3700, doi. 10.1093/bioinformatics/btv447
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WATCLUST: a tool for improving the design of drugs based on protein-water interactions.
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- Bioinformatics, 2015, v. 31, n. 22, p. 3697, doi. 10.1093/bioinformatics/btv411
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CRISPR-ERA: a comprehensive design tool for CRISPR-mediated gene editing, repression and activation.
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- Bioinformatics, 2015, v. 31, n. 22, p. 3676, doi. 10.1093/bioinformatics/btv423
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FermiKit: assembly-based variant calling for Illumina resequencing data.
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- Bioinformatics, 2015, v. 31, n. 22, p. 3694, doi. 10.1093/bioinformatics/btv440
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CEMAsuite: open source degenerate PCR primer design.
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- Bioinformatics, 2015, v. 31, n. 22, p. 3688, doi. 10.1093/bioinformatics/btv420
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High-order neural networks and kernel methods for peptide-MHC binding prediction.
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- Bioinformatics, 2015, v. 31, n. 22, p. 3600, doi. 10.1093/bioinformatics/btv371
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Statistically identifying tumor suppressors and oncogenes from pan-cancer genome-sequencing data.
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- Bioinformatics, 2015, v. 31, n. 22, p. 3561, doi. 10.1093/bioinformatics/btv430
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A mutation profile for top-k patient search exploiting Gene-Ontology and orthogonal non-negative matrix factorization.
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- Bioinformatics, 2015, v. 31, n. 22, p. 3653, doi. 10.1093/bioinformatics/btv409
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TEtranscripts: a package for including transposable elements in differential expression analysis of RNA-seq datasets.
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- Bioinformatics, 2015, v. 31, n. 22, p. 3593, doi. 10.1093/bioinformatics/btv422
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RxnSim: a tool to compare biochemical reactions.
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- Bioinformatics, 2015, v. 31, n. 22, p. 3712, doi. 10.1093/bioinformatics/btv416
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Statistical models for RNA-seq data derived from a two-condition 48-replicate experiment.
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- Bioinformatics, 2015, v. 31, n. 22, p. 3625, doi. 10.1093/bioinformatics/btv425
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GeneVetter: a web tool for quantitative monogenic assessment of rare diseases.
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- Bioinformatics, 2015, v. 31, n. 22, p. 3682, doi. 10.1093/bioinformatics/btv432
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SomaticSignatures: inferring mutational signatures from single-nucleotide variants.
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- Bioinformatics, 2015, v. 31, n. 22, p. 3673, doi. 10.1093/bioinformatics/btv408
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dendextend: an R package for visualizing, adjusting and comparing trees of hierarchical clustering.
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- Bioinformatics, 2015, v. 31, n. 22, p. 3718, doi. 10.1093/bioinformatics/btv428
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ClicO FS: an interactive web-based service of Circos.
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- Bioinformatics, 2015, v. 31, n. 22, p. 3685, doi. 10.1093/bioinformatics/btv433
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MetTailor: dynamic block summary and intensity normalization for robust analysis of mass spectrometry data in metabolomics.
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- Bioinformatics, 2015, v. 31, n. 22, p. 3645, doi. 10.1093/bioinformatics/btv434
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The MI bundle: enabling network and structural biology in genome visualization tools.
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- Bioinformatics, 2015, v. 31, n. 22, p. 3679, doi. 10.1093/bioinformatics/btv431
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Spaced seeds improve k-mer-based metagenomic classification.
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- Bioinformatics, 2015, v. 31, n. 22, p. 3584, doi. 10.1093/bioinformatics/btv419
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Generation of sequence-based data for pedigree-segregating Mendelian or Complex traits.
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- Bioinformatics, 2015, v. 31, n. 22, p. 3706, doi. 10.1093/bioinformatics/btv412
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Mapping networks of light-dark transition in LOV photoreceptors.
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- Bioinformatics, 2015, v. 31, n. 22, p. 3608, doi. 10.1093/bioinformatics/btv429
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