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Characterization and predictive functional profiles on metagenomic 16S rRNA data of liver transplant recipients: A longitudinal study.
- Published in:
- Clinical Transplantation, 2022, v. 36, n. 2, p. 1, doi. 10.1111/ctr.14534
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- Article
Identifying Pseudomonas syringae Type III Secreted Effector Function via a Yeast Genomic Screen.
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- G3: Genes | Genomes | Genetics, 2019, v. 9, n. 2, p. 535, doi. 10.1534/g3.118.200877
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- Article
Topo-phylogeny: Visualizing evolutionary relationships on a topographic landscape.
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- PLoS ONE, 2017, v. 12, n. 5, p. 1, doi. 10.1371/journal.pone.0175895
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- Article
A genome-wide association analysis reveals a potential role for recombination in the evolution of antimicrobial resistance in Burkholderia multivorans.
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- PLoS Pathogens, 2018, v. 14, n. 12, p. 1, doi. 10.1371/journal.ppat.1007453
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- Article
Predictive modeling of antibiotic eradication therapy success for new-onset Pseudomonas aeruginosa pulmonary infections in children with cystic fibrosis.
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- PLoS Computational Biology, 2023, v. 19, n. 9, p. 1, doi. 10.1371/journal.pcbi.1011424
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- Publication type:
- Article
Microbial genome-enabled insights into plant-microorganism interactions.
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- Nature Reviews Genetics, 2014, v. 15, n. 12, p. 797, doi. 10.1038/nrg3748
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- Article
Comparative Genomics of Host-Specific Virulence in Pseudomonas syringae.
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- Genetics, 2006, v. 174, n. 2, p. 1041, doi. 10.1534/genetics.106.060996
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- Article
Diverse Evolutionary Mechanisms Shape the Type III Effector Virulence Factor Repertoire in the Plant Pathogen Pseudomonas syringae.
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- Genetics, 2004, v. 167, n. 3, p. 1341, doi. 10.1534/genetics.103.019638
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- Publication type:
- Article
Detecting selective sweeps in naturally occurring Escherichia coli.
- Published in:
- Genetics, 1994, v. 138, n. 4, p. 993, doi. 10.1093/genetics/138.4.993
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- Publication type:
- Article
Limiting oxidative DNA damage reduces microbe-induced colitis-associated colorectal cancer.
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- Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-15549-6
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- Article
The spatial and temporal distribution of SARS-CoV-2 from the built environment of COVID-19 patient rooms: A multicentre prospective study.
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- PLoS ONE, 2023, v. 17, n. 3, p. 1, doi. 10.1371/journal.pone.0282489
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- Article
RecPD: A Recombination-aware measure of phylogenetic diversity.
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- PLoS Computational Biology, 2022, v. 18, n. 2, p. 1, doi. 10.1371/journal.pcbi.1009899
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- Publication type:
- Article
Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure.
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- Microbiome, 2022, v. 10, n. 1, p. 1, doi. 10.1186/s40168-022-01319-7
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- Article
Genomic variability and plasticity of Pseudomonas causing coffee leaf spots in Minas Gerais state, Brazil.
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- Plant Pathology, 2022, v. 71, n. 4, p. 934, doi. 10.1111/ppa.13521
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- Publication type:
- Article
Elevated Temperature Differentially Influences Effector-Triggered Immunity Outputs in Arabidopsis.
- Published in:
- Frontiers in Plant Science, 2015, p. 1, doi. 10.3389/fpls.2015.00995
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- Publication type:
- Article
Peptides and small molecules of the plant-pathogen apoplastic arena.
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- Frontiers in Plant Science, 2014, v. 5, p. 1, doi. 10.3389/fpls.2014.00677
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- Publication type:
- Article
Assessment of Inter-Laboratory Variation in the Characterization and Analysis of the Mucosal Microbiota in Crohn's Disease and Ulcerative Colitis.
- Published in:
- Frontiers in Microbiology, 2020, v. 11, p. N.PAG, doi. 10.3389/fmicb.2020.02028
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- Publication type:
- Article
Genomic screens identify a new phytobacterial microbe-associated molecular pattern and the cognate Arabidopsis receptor-like kinase that mediates its immune elicitation.
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- Genome Biology, 2016, v. 17, p. 1, doi. 10.1186/s13059-016-0955-7
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- Article
Population genomics of Vibrionaceae isolated from an endangered oasis reveals local adaptation after an environmental perturbation.
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- BMC Genomics, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s12864-020-06829-y
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- Article
Global Analysis of the Fungal Microbiome in Cystic Fibrosis Patients Reveals Loss of Function of the Transcriptional Repressor Nrg1 as a Mechanism of Pathogen Adaptation.
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- PLoS Pathogens, 2015, v. 11, n. 11, p. 1, doi. 10.1371/journal.ppat.1005308
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- Publication type:
- Article
Genomic Analysis of the Kiwifruit Pathogen <i>Pseudomonas syringae</i> pv. <i>actinidiae</i> Provides Insight into the Origins of an Emergent Plant Disease.
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- PLoS Pathogens, 2013, v. 9, n. 7, p. 1, doi. 10.1371/journal.ppat.1003503
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- Article
A Bacterial Acetyltransferase Destroys Plant Microtubule Networks and Blocks Secretion.
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- PLoS Pathogens, 2012, v. 8, n. 2, p. 1, doi. 10.1371/journal.ppat.1002523
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- Article
Tri6 Is a Global Transcription Regulator in the Phytopathogen Fusarium graminearum.
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- PLoS Pathogens, 2011, v. 7, n. 9, p. 1, doi. 10.1371/journal.ppat.1002266
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- Article
Terminal Reassortment Drives the Quantum Evolution of Type III Effectors in Bacterial Pathogens.
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- PLoS Pathogens, 2006, v. 2, n. 10, p. 0913, doi. 10.1371/journal.ppat.0020104
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- Article
Gene Slider: sequence logo interactive data-visualization for education and research.
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- Bioinformatics, 2016, v. 32, n. 23, p. 370, doi. 10.1093/bioinformatics/btw525
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- Publication type:
- Article
Association of Exposure to Formula in the Hospital and Subsequent Infant Feeding Practices With Gut Microbiota and Risk of Overweight in the First Year of Life.
- Published in:
- JAMA Pediatrics, 2018, v. 172, n. 7, p. e181161, doi. 10.1001/jamapediatrics.2018.1161
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- Article
Roles of Birth Mode and Infant Gut Microbiota in Intergenerational Transmission of Overweight and Obesity From Mother to Offspring.
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- JAMA Pediatrics, 2018, v. 172, n. 4, p. 368, doi. 10.1001/jamapediatrics.2017.5535
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- Article
Host–pathogen interplay and the evolution of bacterial effectors.
- Published in:
- Cellular Microbiology, 2008, v. 10, n. 2, p. 285, doi. 10.1111/j.1462-5822.2007.01078.x
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- Article
Extensive remodeling of the Pseudomonas syringae pv. avellanae type III secretome associated with two independent host shifts onto hazelnut.
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- BMC Microbiology, 2012, v. 12, n. 1, p. 141, doi. 10.1186/1471-2180-12-141
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- Article
Associations of NOD2 polymorphisms with Erysipelotrichaceae in stool of in healthy first degree relatives of Crohn's disease subjects.
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- BMC Medical Genetics, 2020, v. 21, n. 1, p. N.PAG, doi. 10.1186/s12881-020-01115-w
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- Article
Neutral Genomic Microevolution of a Recently Emerged Pathogen, Salmonella enterica Serovar Agona.
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- PLoS Genetics, 2013, v. 9, n. 4, p. 1, doi. 10.1371/journal.pgen.1003471
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- Article
Epidemiology of Clonal Pseudomonas aeruginosa Infection in a Canadian Cystic Fibrosis Population.
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- 2018
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- Publication type:
- journal article
Pseudomonas aeruginosa aggregation and Psl expression in sputum is associated with antibiotic eradication failure in children with cystic fibrosis.
- Published in:
- Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-25889-6
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- Article
The HopF family of Pseudomonas syringae type III secreted effectors.
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- Molecular Plant Pathology, 2017, v. 18, n. 3, p. 457, doi. 10.1111/mpp.12412
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- Article
Evolution, genomics and epidemiology of Pseudomonas syringae.
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- Molecular Plant Pathology, 2017, v. 18, n. 1, p. 152, doi. 10.1111/mpp.12506
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- Publication type:
- Article
The YopJ superfamily in plant-associated bacteria.
- Published in:
- Molecular Plant Pathology, 2011, v. 12, n. 9, p. 928, doi. 10.1111/j.1364-3703.2011.00719.x
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- Article
Short communication The PCR amplification and characterization of entire Pseudomonas syringae hrp/hrc clusters.
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- Molecular Plant Pathology, 2004, v. 5, n. 2, p. 137, doi. 10.1111/j.1364-3703.2004.00212.x
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- Publication type:
- Article
Micronutrient supplements can promote disruptive protozoan and fungal communities in the developing infant gut.
- Published in:
- Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-27010-3
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- Publication type:
- Article
Pulmonary Bacterial Communities in Surgically Resected Noncystic Fibrosis Bronchiectasis Lungs Are Similar to Those in Cystic Fibrosis.
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- Pulmonary Medicine, 2012, p. 1, doi. 10.1155/2012/746358
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- Publication type:
- Article
Pseudomonas aeruginosa Strain-sharing in Early Infection Among Children With Cystic Fibrosis.
- Published in:
- Clinical Infectious Diseases, 2021, v. 73, n. 9, p. e2521, doi. 10.1093/cid/ciaa788
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- Publication type:
- Article
Pseudomonas syringae coffee blight is associated with the horizontal transfer of plasmid‐encoded type III effectors.
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- New Phytologist, 2024, v. 241, n. 1, p. 409, doi. 10.1111/nph.19364
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- Publication type:
- Article
Immunodiversity of the Arabidopsis ZAR1 NLR Is Conveyed by Receptor-Like Cytoplasmic Kinase Sensors.
- Published in:
- Frontiers in Plant Science, 2020, v. 11, p. N.PAG, doi. 10.3389/fpls.2020.01290
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- Publication type:
- Article
Immunomodulation by the Pseudomonas syringae HopZ Type III Effector Family in Arabidopsis.
- Published in:
- PLoS ONE, 2014, v. 9, n. 12, p. 1, doi. 10.1371/journal.pone.0116152
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- Publication type:
- Article
The Pseudomonas syringae Type III Effector HopF2 Suppresses Arabidopsis Stomatal Immunity.
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- PLoS ONE, 2014, v. 9, n. 12, p. 1, doi. 10.1371/journal.pone.0114921
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- Publication type:
- Article
Characterization of the Gut-Associated Microbiome in Inflammatory Pouch Complications Following Ileal Pouch-Anal Anastomosis.
- Published in:
- PLoS ONE, 2013, v. 8, n. 9, p. 1, doi. 10.1371/journal.pone.0066934
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- Publication type:
- Article
Analysis of the Cystic Fibrosis Lung Microbiota via Serial Illumina Sequencing of Bacterial 16S rRNA Hypervariable.
- Published in:
- PLoS ONE, 2012, v. 7, n. 10, p. 1, doi. 10.1371/journal.pone.0045791
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- Publication type:
- Article
Pseudomonas syringae pv. actinidiae (PSA) Isolates from Recent Bacterial Canker of Kiwifruit Outbreaks Belong to the Same Genetic Lineage.
- Published in:
- PLoS ONE, 2012, v. 7, n. 5, p. 1, doi. 10.1371/journal.pone.0036518
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- Publication type:
- Article
Use of Low-Coverage, Large-Insert, Short-Read Data for Rapid and Accurate Generation of Enhanced-Quality Draft Pseudomonas Genome Sequences.
- Published in:
- PLoS ONE, 2011, v. 6, n. 11, p. 1, doi. 10.1371/journal.pone.0027199
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- Article
Forward chemical genetic screens in Arabidopsis identify genes that influence sensitivity to the phytotoxic compound sulfamethoxazole.
- Published in:
- BMC Plant Biology, 2012, v. 12, n. 1, p. 226, doi. 10.1186/1471-2229-12-226
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- Publication type:
- Article
Allele-Specific Virulence Attenuation of the Pseudomonas syringae HopZ1a Type III Effector via the Arabidopsis ZAR1 Resistance Protein.
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- PLoS Genetics, 2010, v. 6, n. 4, p. 1, doi. 10.1371/journal.pgen.1000894
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- Article