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A Scalable Strand-Specific Protocol Enabling Full-Length Total RNA Sequencing From Single Cells.
Published in:
Frontiers in Genetics, 2021, v. 11, p. 1, doi. 10.3389/fgene.2021.665888
By:
- Haile, Simon;
- Corbett, Richard D.;
- LeBlanc, Veronique G.;
- Wei, Lisa;
- Pleasance, Stephen;
- Bilobram, Steve;
- Nip, Ka Ming;
- Brown, Kirstin;
- Trinh, Eva;
- Smith, Jillian;
- Trinh, Diane L.;
- Bala, Miruna;
- Chuah, Eric;
- Coope, Robin J. N.;
- Moore, Richard A.;
- Mungall, Andrew J.;
- Mungall, Karen L.;
- Zhao, Yongjun;
- Hirst, Martin;
- Aparicio, Samuel
Publication type:
Article
Contaminant-induced current decline in capillary array electrophoresis.
Published in:
Electrophoresis, 2005, v. 26, n. 11, p. 2128, doi. 10.1002/elps.200410291
By:
- Robin J. N. Coope;
- Andre Marziali
Publication type:
Article
Extraction-free clinical detection of SARS-CoV-2 virus from saline gargle samples using Hamilton STARlet liquid handler.
Published in:
Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-30993-2
By:
- Gadkar, Vijay J.;
- Goldfarb, David M.;
- Al-Rawahi, Ghada N.;
- Srigley, Jocelyn A.;
- Smailus, Duane E.;
- Coope, Robin J. N.;
- Pleasance, Stephen;
- Watson, Nicole;
- Chen, Tammy;
- Lam, Sunny;
- Hoang, Linda;
- Tilley, Peter A. G.
Publication type:
Article
Automated Library Construction and Analysis for High-Throughput Nanopore Sequencing of SARS-CoV-2<sup> </sup>.
Published in:
Journal of Applied Laboratory Medicine, 2022, v. 7, n. 5, p. 1025, doi. 10.1093/jalm/jfac054
By:
- Coope, Robin J N;
- Matic, Nancy;
- Pandoh, Pawan K;
- Corbett, Richard D;
- Smailus, Duane E;
- Pleasance, Stephen;
- Lowe, Christopher F;
- Ritchie, Gordon;
- Chorlton, Samuel D;
- Young, Matthew;
- Ally, Adrian A;
- Asano, Jennifer K;
- Carlsen, Rebecca E;
- Chahal, Sundeep S;
- Zhao, Yongjun;
- Holmes, Daniel T;
- Romney, Marc G;
- Jones, Steven J M;
- Marra, Marco A
Publication type:
Article
Efficient assembly of very short oligonucleotides using T4 DNA Ligase.
Published in:
BMC Research Notes, 2010, v. 3, p. 291, doi. 10.1186/1756-0500-3-291
By:
- Horspool, Daniel R.;
- Coope, Robin J. N.;
- Holt, Robert A.
Publication type:
Article
Evaluation of protocols for rRNA depletion-based RNA sequencing of nanogram inputs of mammalian total RNA.
Published in:
PLoS ONE, 2019, v. 14, n. 10, p. 1, doi. 10.1371/journal.pone.0224578
By:
- Haile, Simon;
- Corbett, Richard D.;
- Bilobram, Steve;
- Mungall, Karen;
- Grande, Bruno M.;
- Kirk, Heather;
- Pandoh, Pawan;
- MacLeod, Tina;
- McDonald, Helen;
- Bala, Miruna;
- Coope, Robin J.;
- Moore, Richard A.;
- Mungall, Andrew J.;
- Zhao, Yongjun;
- Morin, Ryan D.;
- Jones, Steven J.;
- Marra, Marco A.
Publication type:
Article
Complete Mitochondrial Genome of a Gymnosperm, Sitka Spruce (Picea sitchensis), Indicates a Complex Physical Structure.
Published in:
Genome Biology & Evolution, 2020, v. 12, n. 7, p. 1174, doi. 10.1093/gbe/evaa108
By:
- Jackman, Shaun D;
- Coombe, Lauren;
- Warren, René L;
- Kirk, Heather;
- Trinh, Eva;
- MacLeod, Tina;
- Pleasance, Stephen;
- Pandoh, Pawan;
- Zhao, Yongjun;
- Coope, Robin J;
- Bousquet, Jean;
- Bohlmann, Joerg;
- Jones, Steven J M;
- Birol, Inanc
Publication type:
Article
Increasing quality, throughput and speed of sample preparation for strand-specific messenger RNA sequencing.
Published in:
BMC Genomics, 2017, v. 18, p. 1, doi. 10.1186/s12864-017-3900-6
By:
- Haile, Simon;
- Corbett, Richard D.;
- MacLeod, Tina;
- Bilobram, Steve;
- Smailus, Duane;
- Tsao, Philip;
- Kirk, Heather;
- McDonald, Helen;
- Pandoh, Pawan;
- Bala, Miruna;
- Hirst, Martin;
- Miller, Diane;
- Moore, Richard A.;
- Mungall, Andrew J.;
- Schein, Jacquie;
- Coope, Robin J.;
- Ma, Yussanne;
- Yongjun Zhao;
- Holt, Rob A.;
- Jones, Steven J.
Publication type:
Article
Assembly of the Complete Sitka Spruce Chloroplast Genome Using 10X Genomics’ GemCode Sequencing Data.
Published in:
PLoS ONE, 2016, v. 11, n. 9, p. 1, doi. 10.1371/journal.pone.0163059
By:
- Coombe, Lauren;
- Warren, René L.;
- Jackman, Shaun D.;
- Yang, Chen;
- Vandervalk, Benjamin P.;
- Moore, Richard A.;
- Pleasance, Stephen;
- Coope, Robin J.;
- Bohlmann, Joerg;
- Holt, Robert A.;
- Jones, Steven J. M.;
- Birol, Inanc
Publication type:
Article
Comprehensive molecular portraits of human breast tumours.
Published in:
Nature, 2012, v. 490, n. 7418, p. 61, doi. 10.1038/nature11412
By:
- Koboldt, Daniel C.;
- Fulton, Robert S.;
- McLellan, Michael D.;
- Schmidt, Heather;
- Kalicki-Veizer, Joelle;
- McMichael, Joshua F.;
- Fulton, Lucinda L.;
- Dooling, David J.;
- Ding, Li;
- Mardis, Elaine R.;
- Wilson, Richard K.;
- Ally, Adrian;
- Balasundaram, Miruna;
- Butterfield, Yaron S. N.;
- Carlsen, Rebecca;
- Carter, Candace;
- Chu, Andy;
- Chuah, Eric;
- Chun, Hye-Jung E.;
- Coope, Robin J. N.
Publication type:
Article
Sources of erroneous sequences and artifact chimeric reads in next generation sequencing of genomic DNA from formalin-fixed paraffin-embedded samples.
Published in:
Nucleic Acids Research, 2019, v. 47, n. 2, p. e12, doi. 10.1093/nar/gky1142
By:
- Haile, Simon;
- Corbett, Richard D;
- Bilobram, Steve;
- Bye, Morgan H;
- Kirk, Heather;
- Pandoh, Pawan;
- Trinh, Eva;
- MacLeod, Tina;
- McDonald, Helen;
- Bala, Miruna;
- Miller, Diane;
- Novik, Karen;
- Coope, Robin J;
- Moore, Richard A;
- Zhao, Yongjun;
- Mungall, Andrew J;
- Ma, Yussanne;
- Holt, Rob A;
- Jones, Steven J;
- Marra, Marco A
Publication type:
Article
The Genome of the Northern Sea Otter (Enhydra lutris kenyoni).
Published in:
Genes, 2017, v. 8, n. 12, p. 379, doi. 10.3390/genes8120379
By:
- Jones, Samantha J.;
- Haulena, Martin;
- Taylor, Gregory A.;
- Simon Chan;
- Bilobram, Steven;
- Warren, René L.;
- Austin Hammond, S.;
- Mungall, Karen L.;
- Caleb Choo;
- Kirk, Heather;
- Pandoh, Pawan;
- Ally, Adrian;
- Dhalla, Noreen;
- Tam, Angela K. Y.;
- Troussard, Armelle;
- Paulino, Daniel;
- Coope, Robin J. N.;
- Mungall, Andrew J.;
- Moore, Richard;
- Yongjun Zhao
Publication type:
Article
Automated high throughput nucleic acid purification from formalin-fixed paraffin-embedded tissue samples for next generation sequence analysis.
Published in:
PLoS ONE, 2017, v. 12, n. 6, p. 1, doi. 10.1371/journal.pone.0178706
By:
- Haile, Simon;
- Pandoh, Pawan;
- McDonald, Helen;
- Corbett, Richard D.;
- Tsao, Philip;
- Kirk, Heather;
- MacLeod, Tina;
- Jones, Martin;
- Bilobram, Steve;
- Brooks, Denise;
- Smailus, Duane;
- Steidl, Christian;
- Scott, David W.;
- Bala, Miruna;
- Hirst, Martin;
- Miller, Diane;
- Moore, Richard A.;
- Mungall, Andrew J.;
- Coope, Robin J.;
- Ma, Yussanne
Publication type:
Article

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