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Genetic Diversity of SARS-CoV-2 among Travelers Arriving in Hong Kong.
Published in:
Emerging Infectious Diseases, 2021, v. 27, n. 10, p. 2666, doi. 10.3201/eid2710.211028
By:
- Haogao Gu;
- Chu, Daniel K. W.;
- Chang, Lydia D. J.;
- Cheuk, Sammi S. Y.;
- Gurung, Shreya;
- Krishnan, Pavithra;
- Ng, Daisy Y. M.;
- Liu, Gigi Y. Z.;
- Wan, Carrie K. C.;
- Ruopeng Xie;
- Cheng, Samuel S. M.;
- Cowling, Benjamin J.;
- Tsang, Dominic N. C.;
- Peiris, Malik;
- Dhanasekaran, Vijaykrishna;
- Poon, Leo L. M.
Publication type:
Article
Resurgence of Omicron BA.2 in SARS-CoV-2 infection-naive Hong Kong.
Published in:
Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-38201-5
By:
- Xie, Ruopeng;
- Edwards, Kimberly M.;
- Adam, Dillon C.;
- Leung, Kathy S. M.;
- Tsang, Tim K.;
- Gurung, Shreya;
- Xiong, Weijia;
- Wei, Xiaoman;
- Ng, Daisy Y. M.;
- Liu, Gigi Y. Z.;
- Krishnan, Pavithra;
- Chang, Lydia D. J.;
- Cheng, Samuel M. S.;
- Gu, Haogao;
- Siu, Gilman K. H.;
- Wu, Joseph T.;
- Leung, Gabriel M.;
- Peiris, Malik;
- Cowling, Benjamin J.;
- Poon, Leo L. M.
Publication type:
Article
Human seasonal influenza under COVID-19 and the potential consequences of influenza lineage elimination.
Published in:
Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-29402-5
By:
- Dhanasekaran, Vijaykrishna;
- Sullivan, Sheena;
- Edwards, Kimberly M.;
- Xie, Ruopeng;
- Khvorov, Arseniy;
- Valkenburg, Sophie A.;
- Cowling, Benjamin J.;
- Barr, Ian G.
Publication type:
Article
Off-season RSV epidemics in Australia after easing of COVID-19 restrictions.
Published in:
Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-30485-3
By:
- Eden, John-Sebastian;
- Sikazwe, Chisha;
- Xie, Ruopeng;
- Deng, Yi-Mo;
- Sullivan, Sheena G.;
- Michie, Alice;
- Levy, Avram;
- Cutmore, Elena;
- Blyth, Christopher C.;
- Britton, Philip N.;
- Crawford, Nigel;
- Dong, Xiaomin;
- Dwyer, Dominic E.;
- Edwards, Kimberly M.;
- Horsburgh, Bethany A.;
- Foley, David;
- Kennedy, Karina;
- Minney-Smith, Cara;
- Speers, David;
- Tulloch, Rachel L.
Publication type:
Article
Genomic epidemiology of seasonal influenza circulation in China during prolonged border closure from 2020 to 2021.
Published in:
Virus Evolution, 2022, v. 8, n. 2, p. 1, doi. 10.1093/ve/veac062
By:
- Xie, Ruopeng;
- Adam, Dillon C;
- Edwards, Kimberly M;
- Gurung, Shreya;
- Wei, Xiaoman;
- Cowling, Benjamin J;
- Dhanasekaran, Vijaykrishna
Publication type:
Article
Human seasonal influenza under COVID-19 and the potential consequences of influenza lineage elimination.
Published in:
Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-29402-5
By:
- Dhanasekaran, Vijaykrishna;
- Sullivan, Sheena;
- Edwards, Kimberly M.;
- Xie, Ruopeng;
- Khvorov, Arseniy;
- Valkenburg, Sophie A.;
- Cowling, Benjamin J.;
- Barr, Ian G.
Publication type:
Article
Genomic epidemiology of SARS-CoV-2 under an elimination strategy in Hong Kong.
Published in:
Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-28420-7
By:
- Gu, Haogao;
- Xie, Ruopeng;
- Adam, Dillon C.;
- Tsui, Joseph L.-H.;
- Chu, Daniel K.;
- Chang, Lydia D. J.;
- Cheuk, Sammi S. Y.;
- Gurung, Shreya;
- Krishnan, Pavithra;
- Ng, Daisy Y. M.;
- Liu, Gigi Y. Z.;
- Wan, Carrie K. C.;
- Cheng, Samuel S. M.;
- Edwards, Kimberly M.;
- Leung, Kathy S. M.;
- Wu, Joseph T.;
- Tsang, Dominic N. C.;
- Leung, Gabriel M.;
- Cowling, Benjamin J.;
- Peiris, Malik
Publication type:
Article
DeepVF: a deep learning-based hybrid framework for identifying virulence factors using the stacking strategy.
Published in:
Briefings in Bioinformatics, 2021, v. 22, n. 3, p. 1, doi. 10.1093/bib/bbaa125
By:
- Xie, Ruopeng;
- Li, Jiahui;
- Wang, Jiawei;
- Dai, Wei;
- Leier, André;
- Marquez-Lago, Tatiana T;
- Akutsu, Tatsuya;
- Lithgow, Trevor;
- Song, Jiangning;
- Zhang, Yanju
Publication type:
Article
Computational analysis and prediction of lysine malonylation sites by exploiting informative features in an integrative machine-learning framework.
Published in:
Briefings in Bioinformatics, 2019, v. 20, n. 6, p. 2185, doi. 10.1093/bib/bby079
By:
- Zhang, Yanju;
- Xie, Ruopeng;
- Wang, Jiawei;
- Leier, André;
- Marquez-Lago, Tatiana T;
- Akutsu, Tatsuya;
- Webb, Geoffrey I;
- Chou, Kuo-Chen;
- Song, Jiangning
Publication type:
Article
AcrHub: an integrative hub for investigating, predicting and mapping anti-CRISPR proteins.
Published in:
Nucleic Acids Research, 2021, v. 49, n. D1, p. D630, doi. 10.1093/nar/gkaa951
By:
- Wang, Jiawei;
- Dai, Wei;
- Li, Jiahui;
- Li, Qi;
- Xie, Ruopeng;
- Zhang, Yanju;
- Stubenrauch, Christopher;
- Lithgow, Trevor
Publication type:
Article
PaCRISPR: a server for predicting and visualizing anti-CRISPR proteins.
Published in:
Nucleic Acids Research, 2020, v. 48, n. W1, p. W348, doi. 10.1093/nar/gkaa432
By:
- Wang, Jiawei;
- Dai, Wei;
- Li, Jiahui;
- Xie, Ruopeng;
- Dunstan, Rhys A;
- Stubenrauch, Christopher;
- Zhang, Yanju;
- Lithgow, Trevor
Publication type:
Article
PeNGaRoo, a combined gradient boosting and ensemble learning framework for predicting non-classical secreted proteins.
Published in:
Bioinformatics, 2020, v. 36, n. 3, p. 704, doi. 10.1093/bioinformatics/btz629
By:
- Zhang, Yanju;
- Yu, Sha;
- Xie, Ruopeng;
- Li, Jiahui;
- Leier, André;
- Marquez-Lago, Tatiana T;
- Akutsu, Tatsuya;
- Smith, A Ian;
- Ge, Zongyuan;
- Wang, Jiawei;
- Lithgow, Trevor;
- Song, Jiangning
Publication type:
Article
Bastion3: a two-layer ensemble predictor of type III secreted effectors.
Published in:
Bioinformatics, 2019, v. 35, n. 12, p. 2017, doi. 10.1093/bioinformatics/bty914
By:
- Wang, Jiawei;
- Li, Jiahui;
- Yang, Bingjiao;
- Xie, Ruopeng;
- Marquez-Lago, Tatiana T;
- Leier, André;
- Hayashida, Morihiro;
- Akutsu, Tatsuya;
- Zhang, Yanju;
- Chou, Kuo-Chen;
- Selkrig, Joel;
- Zhou, Tieli;
- Song, Jiangning;
- Lithgow, Trevor
Publication type:
Article

Found: 13