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Correction to: Piphillin predicts metagenomic composition and dynamics from DADA2- corrected 16S rDNA sequences.
- Published in:
- 2020
- By:
- Publication type:
- Correction Notice
Piphillin predicts metagenomic composition and dynamics from DADA2-corrected 16S rDNA sequences.
- Published in:
- BMC Genomics, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s12864-019-6427-1
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- Publication type:
- Article
Multi-angle meta-analysis of the gut microbiome in Autism Spectrum Disorder: a step toward understanding patient subgroups.
- Published in:
- Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-21327-9
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- Publication type:
- Article
Multi-angle meta-analysis of the gut microbiome in Autism Spectrum Disorder: a step toward understanding patient subgroups.
- Published in:
- Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-21327-9
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- Publication type:
- Article
Accurate taxonomy assignments from 16S rRNA sequences produced by highly parallel pyrosequencers.
- Published in:
- Nucleic Acids Research, 2008, v. 36, n. 18, p. e120, doi. 10.1093/nar/gkn491
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- Publication type:
- Article
Chronic kidney disease alters intestinal microbial flora.
- Published in:
- Kidney International, 2013, v. 83, n. 2, p. 308, doi. 10.1038/ki.2012.345
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- Publication type:
- Article
Coral transcriptome and bacterial community profiles reveal distinct Yellow Band Disease states in Orbicella faveolata.
- Published in:
- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2014, v. 8, n. 12, p. 2411, doi. 10.1038/ismej.2014.85
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- Publication type:
- Article
Tackling the minority: sulfate-reducing bacteria in an archaea-dominated subsurface biofilm.
- Published in:
- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2013, v. 7, n. 3, p. 635, doi. 10.1038/ismej.2012.133
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- Publication type:
- Article
Influence of geogenic factors on microbial communities in metallogenic Australian soils.
- Published in:
- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2012, v. 6, n. 11, p. 2107, doi. 10.1038/ismej.2012.48
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- Publication type:
- Article
An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea.
- Published in:
- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2012, v. 6, n. 3, p. 610, doi. 10.1038/ismej.2011.139
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- Publication type:
- Article
Impact of training sets on classification of high-throughput bacterial 16s rRNA gene surveys.
- Published in:
- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2012, v. 6, n. 1, p. 94, doi. 10.1038/ismej.2011.82
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- Publication type:
- Article
Supervised classification of microbiota mitigates mislabeling errors.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2011, v. 5, n. 4, p. 570, doi. 10.1038/ismej.2010.148
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- Publication type:
- Article
Microbial secondary succession in a chronosequence of chalk grasslands.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2010, v. 4, n. 5, p. 711, doi. 10.1038/ismej.2010.11
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- Publication type:
- Article
Bacterial diversity and White Plague Disease-associated community changes in the Caribbean coral Montastraea faveolata.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2009, v. 3, n. 5, p. 512, doi. 10.1038/ismej.2008.131
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- Publication type:
- Article
Environmental microarray analyses of Antarctic soil microbial communities.
- Published in:
- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2009, v. 3, n. 3, p. 340, doi. 10.1038/ismej.2008.111
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- Publication type:
- Article
Selective progressive response of soil microbial community to wild oat roots.
- Published in:
- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2009, v. 3, n. 2, p. 168, doi. 10.1038/ismej.2008.103
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- Publication type:
- Article
A novel ecological role of the Firmicutes identified in thermophilic microbial fuel cells.
- Published in:
- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2008, v. 2, n. 11, p. 1146, doi. 10.1038/ismej.2008.48
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- Publication type:
- Article
Strain level and comprehensive microbiome analysis in inflammatory bowel disease via multi-technology meta-analysis identifies key bacterial influencers of disease.
- Published in:
- Frontiers in Microbiology, 2022, v. 13, p. 01, doi. 10.3389/fmicb.2022.961020
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- Publication type:
- Article
New Perspectives on Microbial Community Distortion after Whole-Genome Amplification.
- Published in:
- PLoS ONE, 2015, v. 10, n. 5, p. 1, doi. 10.1371/journal.pone.0124158
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- Publication type:
- Article
Comparing Bacterial Community Composition of Healthy and Dark Spot-Affected Siderastrea siderea in Florida and the Caribbean.
- Published in:
- PLoS ONE, 2014, v. 9, n. 10, p. 1, doi. 10.1371/journal.pone.0108767
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- Publication type:
- Article
Coupling Genetic and Chemical Microbiome Profiling Reveals Heterogeneity of Archaeome and Bacteriome in Subsurface Biofilms That Are Dominated by the Same Archaeal Species.
- Published in:
- PLoS ONE, 2014, v. 9, n. 6, p. 1, doi. 10.1371/journal.pone.0099801
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- Publication type:
- Article
Comparing Bacterial Community Composition between Healthy and White Plague-Like Disease States in <i>Orbicella annularis</i> Using PhyloChip™ G3 Microarrays.
- Published in:
- PLoS ONE, 2013, v. 8, n. 11, p. 1, doi. 10.1371/journal.pone.0079801
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- Publication type:
- Article
Truffle Brûlés Have an Impact on the Diversity of Soil Bacterial Communities.
- Published in:
- PLoS ONE, 2013, v. 8, n. 4, p. 1, doi. 10.1371/journal.pone.0061945
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- Publication type:
- Article
The "Most Wanted" Taxa from the Human Microbiome for Whole Genome Sequencing.
- Published in:
- PLoS ONE, 2012, v. 7, n. 7, p. 1, doi. 10.1371/journal.pone.0041294
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- Publication type:
- Article
Characterization of Coastal Urban Watershed Bacterial Communities Leads to Alternative Community-Based Indicators.
- Published in:
- PLoS ONE, 2010, v. 5, n. 6, p. 1, doi. 10.1371/journal.pone.0011285
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- Publication type:
- Article
Automated group assignment in large phylogenetic trees usingGRUNT: GRouping, Ungrouping, Naming Tool.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 402, doi. 10.1186/1471-2105-8-402
- By:
- Publication type:
- Article
High-Density Universal 16S rRNA Microarray Analysis Reveals Broader Diversity than Typical Clone Library When Sampling the Environment.
- Published in:
- Microbial Ecology, 2007, v. 53, n. 3, p. 371, doi. 10.1007/s00248-006-9134-9
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- Publication type:
- Article
Changes in the microbial community structure of bacteria, archaea and fungi in response to elevated CO<sub>2</sub> and warming in an Australian native grassland soil.
- Published in:
- Environmental Microbiology, 2012, v. 14, n. 12, p. 3081, doi. 10.1111/j.1462-2920.2012.02855.x
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- Publication type:
- Article
Simrank: Rapid and sensitive general-purpose k-mer search tool.
- Published in:
- BMC Ecology, 2011, v. 11, n. 1, p. 11, doi. 10.1186/1472-6785-11-11
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- Publication type:
- Article
Piphillin: Improved Prediction of Metagenomic Content by Direct Inference from Human Microbiomes.
- Published in:
- PLoS ONE, 2016, v. 11, n. 11, p. 1, doi. 10.1371/journal.pone.0166104
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- Publication type:
- Article
A Comparative Evaluation of Tools to Predict Metabolite Profiles From Microbiome Sequencing Data.
- Published in:
- Frontiers in Microbiology, 2020, v. 11, p. N.PAG, doi. 10.3389/fmicb.2020.595910
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- Publication type:
- Article
Expansion of Urease- and Uricase-Containing, Indole- and p-Cresol-Forming and Contraction of Short-Chain Fatty Acid-Producing Intestinal Microbiota in ESRD.
- Published in:
- American Journal of Nephrology, 2014, v. 39, n. 3, p. 230, doi. 10.1159/000360010
- By:
- Publication type:
- Article
Expansion of urease- and uricase-containing, indole- and p-cresol-forming and contraction of short-chain fatty acid-producing intestinal microbiota in ESRD.
- Published in:
- 2014
- By:
- Publication type:
- journal article
PyNAST: a flexible tool for aligning sequences to a template alignment.
- Published in:
- Bioinformatics, 2010, v. 26, n. 2, p. 266, doi. 10.1093/bioinformatics/btp636
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- Publication type:
- Article
Topic modeling for multi-omic integration in the human gut microbiome and implications for Autism.
- Published in:
- Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-38228-0
- By:
- Publication type:
- Article
Improved detection of disease-associated gut microbes using 16S sequence-based biomarkers.
- Published in:
- BMC Bioinformatics, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s12859-021-04427-7
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- Publication type:
- Article