Found: 23
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PRANC: ML species tree estimation from the ranked gene trees under coalescence.
- Published in:
- Bioinformatics, 2020, v. 36, n. 18, p. 4819, doi. 10.1093/bioinformatics/btaa605
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- Article
GPress: a framework for querying general feature format (GFF) files and expression files in a compressed form.
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- Bioinformatics, 2020, v. 36, n. 18, p. 4810, doi. 10.1093/bioinformatics/btaa604
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- Article
RSSALib: a library for stochastic simulation of complex biochemical reactions.
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- Bioinformatics, 2020, v. 36, n. 18, p. 4825, doi. 10.1093/bioinformatics/btaa602
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- Article
TDAview: an online visualization tool for topological data analysis.
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- Bioinformatics, 2020, v. 36, n. 18, p. 4805, doi. 10.1093/bioinformatics/btaa600
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- Article
Multiple kernel learning for integrative consensus clustering of omic datasets.
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- Bioinformatics, 2020, v. 36, n. 18, p. 4789, doi. 10.1093/bioinformatics/btaa593
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- Article
Neoantimon: a multifunctional R package for identification of tumor-specific neoantigens.
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- Bioinformatics, 2020, v. 36, n. 18, p. 4813, doi. 10.1093/bioinformatics/btaa616
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- Article
Treerecs: an integrated phylogenetic tool, from sequences to reconciliations.
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- Bioinformatics, 2020, v. 36, n. 18, p. 4822, doi. 10.1093/bioinformatics/btaa615
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- Article
Scirpy: a Scanpy extension for analyzing single-cell T-cell receptor-sequencing data.
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- Bioinformatics, 2020, v. 36, n. 18, p. 4817, doi. 10.1093/bioinformatics/btaa611
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- Article
Epiviz File Server: Query, transform and interactively explore data from indexed genomic files.
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- Bioinformatics, 2020, v. 36, n. 18, p. 4682, doi. 10.1093/bioinformatics/btaa591
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- Article
Predicting mechanism of action of cellular perturbations with pathway activity signatures.
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- Bioinformatics, 2020, v. 36, n. 18, p. 4781, doi. 10.1093/bioinformatics/btaa590
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- Article
Evaluating individual genome similarity with a topic model.
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- Bioinformatics, 2020, v. 36, n. 18, p. 4757, doi. 10.1093/bioinformatics/btaa583
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- Article
TreeSAPP: the Tree-based Sensitive and Accurate Phylogenetic Profiler.
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- Bioinformatics, 2020, v. 36, n. 18, p. 4706, doi. 10.1093/bioinformatics/btaa588
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- Article
Detecting and correcting misclassified sequences in the large-scale public databases.
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- Bioinformatics, 2020, v. 36, n. 18, p. 4699, doi. 10.1093/bioinformatics/btaa586
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- Article
Solubility-Weighted Index: fast and accurate prediction of protein solubility.
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- Bioinformatics, 2020, v. 36, n. 18, p. 4691, doi. 10.1093/bioinformatics/btaa578
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- Article
ProbeRating: a recommender system to infer binding profiles for nucleic acid-binding proteins.
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- Bioinformatics, 2020, v. 36, n. 18, p. 4797, doi. 10.1093/bioinformatics/btaa580
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- Article
Prediction of protein-binding residues: dichotomy of sequence-based methods developed using structured complexes versus disordered proteins.
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- Bioinformatics, 2020, v. 36, n. 18, p. 4729, doi. 10.1093/bioinformatics/btaa573
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- Article
Gene regulation inference from single-cell RNA-seq data with linear differential equations and velocity inference.
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- Bioinformatics, 2020, v. 36, n. 18, p. 4774, doi. 10.1093/bioinformatics/btaa576
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- Article
PUMA: PANDA Using MicroRNA Associations.
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- Bioinformatics, 2020, v. 36, n. 18, p. 4765, doi. 10.1093/bioinformatics/btaa571
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- Article
Allowing mutations in maximal matches boosts genome compression performance.
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- Bioinformatics, 2020, v. 36, n. 18, p. 4675, doi. 10.1093/bioinformatics/btaa572
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- Article
Phenotype-specific differences in polygenicity and effect size distribution across functional annotation categories revealed by AI-MiXeR.
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- Bioinformatics, 2020, v. 36, n. 18, p. 4749, doi. 10.1093/bioinformatics/btaa568
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- Article
Modeling circRNA expression pattern with integrated sequence and epigenetic features demonstrates the potential involvement of H3K79me2 in circRNA expression.
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- Bioinformatics, 2020, v. 36, n. 18, p. 4739, doi. 10.1093/bioinformatics/btaa567
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- Article
Fast and accurate prediction of partial charges using Atom-Path-Descriptor-based machine learning.
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- Bioinformatics, 2020, v. 36, n. 18, p. 4721, doi. 10.1093/bioinformatics/btaa566
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- Article
A boosted unbiased molecular dynamics method for predicting ligands binding mechanisms: probing the binding pathway of dasatinib to Src-kinase.
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- Bioinformatics, 2020, v. 36, n. 18, p. 4714, doi. 10.1093/bioinformatics/btaa565
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- Article