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Elucidation of the Natural Function of Sophorolipids Produced by Starmerella bombicola.
Published in:
Journal of Fungi, 2021, v. 7, n. 11, p. 1, doi. 10.3390/jof7110917
By:
- De Clercq, Veerle;
- Roelants, Sophie L. K. W.;
- Castelein, Martijn G.;
- De Maeseneire, Sofie L.;
- Soetaert, Wim K.
Publication type:
Article
Degradation of macroalgal detritus in shallow coastal Antarctic sediments.
Published in:
Limnology & Oceanography, 2019, v. 64, n. 4, p. 1423, doi. 10.1002/lno.11125
By:
- Braeckman, U.;
- Pasotti, F.;
- Vázquez, S.;
- Zacher, K.;
- Hoffmann, R.;
- Elvert, M.;
- Marchant, H.;
- Buckner, C.;
- Quartino, M. L.;
- Mác Cormack, W.;
- Soetaert, K.;
- Wenzhöfer, F.;
- Vanreusel, A.
Publication type:
Article
Glacial meltwater and primary production are drivers of strong CO2 uptake in fjord and coastal waters adjacent to the Greenland Ice Sheet.
Published in:
Biogeosciences, 2015, v. 12, n. 8, p. 2347, doi. 10.5194/bg-12-2347-2015
By:
- Meire, L.;
- Søgaard, D. H.;
- Mortensen, J.;
- Meysman, F. J. R.;
- Soetaert, K.;
- Arendt, K. E.;
- Juul-Pedersen, T.;
- Blicher, M. E.;
- Rysgaard, S.
Publication type:
Article
Sink or link? The bacterial role in benthic carbon cycling in the Arabian Sea's oxygen minimum zone.
Published in:
Biogeosciences, 2013, v. 10, n. 11, p. 6879, doi. 10.5194/bg-10-6879-2013
By:
- Pozzato, L.;
- Van Oevelen, D.;
- Moodley, L.;
- Soetaert, K.;
- Middelburg, J. J.
Publication type:
Article
Impact of global change on coastal oxygen dynamics and risk of hypoxia.
Published in:
Biogeosciences, 2013, v. 10, n. 4, p. 2633, doi. 10.5194/bg-10-2633-2013
By:
- Meire, L.;
- Soetaert, K. E. R.;
- Meysman, F. J. R.
Publication type:
Article
A 13C labelling study on carbon fluxes in Arctic plankton communities under elevated CO2 levels.
Published in:
Biogeosciences, 2013, v. 10, n. 3, p. 1425, doi. 10.5194/bg-10-1425-2013
By:
- de Kluijver, A.;
- Soetaert, K.;
- Czerny, J.;
- Schulz, K. G.;
- Boxhammer, T.;
- Riebesell, U.;
- Middelburg, J. J.
Publication type:
Article
Microbial bioavailability regulates organic matter preservation in marine sediments.
Published in:
Biogeosciences, 2013, v. 10, n. 2, p. 1131, doi. 10.5194/bg-10-1131-2013
By:
- Koho, K. A.;
- Nierop, K. G. J.;
- Moodley, L.;
- Middelburg, J. J.;
- Pozzato, L.;
- Soetaert, K.;
- van der Plicht, J.;
- Reichart, G.-J.
Publication type:
Article
Modelling the impact of Siboglinids on the biogeochemistry of the Captain Arutyunov mud volcano (Gulf of Cadiz).
Published in:
Biogeosciences, 2012, v. 9, n. 12, p. 5341, doi. 10.5194/bg-9-5341-2012
By:
- Soetaert, K.;
- van Oevelen, D.;
- Sommer, S.
Publication type:
Article
Balance of assimilative and dissimilative nitrogen processes in a diatom-rich tidal flat sediment.
Published in:
Biogeosciences, 2012, v. 9, n. 10, p. 4059, doi. 10.5194/bg-9-4059-2012
By:
- Dähnke, K.;
- Moneta, A.;
- Veuger, B.;
- Soetaert, K.;
- Middelburg, J. J.
Publication type:
Article
Modeling biogeochemical processes in sediments from the Rhône River prodelta area (NW Mediterranean Sea).
Published in:
Biogeosciences, 2011, v. 8, n. 5, p. 1351, doi. 10.5194/bg-8-1351-2011
By:
- Pastor, L.;
- Cathalot, C.;
- Deflandre, B.;
- Viollier, E.;
- Soetaert, K.;
- Meysman, F. J. R.;
- Ulses, C.;
- Metzger, E.;
- Rabouille, C.
Publication type:
Article
A macro-tidal freshwater ecosystem recovering from hypereutrophication: the Schelde case study.
Published in:
2009
By:
- Cox, T. J. S.;
- Maris, T.;
- Soetaert, K.;
- Conley, D. J.;
- Van Damme, S.;
- Meire, P.;
- Middelburg, J. J.;
- Vos, M.;
- Struyf, E.
Publication type:
Case Study
pH modelling in aquatic systems with time-variable acid-base dissociation constants applied to the turbid, tidal Scheldt estuary.
Published in:
Biogeosciences, 2009, v. 6, n. 8, p. 1539, doi. 10.5194/bg-6-1539-2009
By:
- Hofmann, A. F.;
- Middelburg, J. J.;
- Soetaert, K.;
- Meysman, F. J. R.
Publication type:
Article
Present nitrogen and carbon dynamics in the Scheldt estuary using a novel 1-D model.
Published in:
Biogeosciences, 2008, v. 5, n. 4, p. 981, doi. 10.5194/bg-5-981-2008
By:
- Hofmann, A. F.;
- Soetaert, K.;
- Middelburg, J. J.
Publication type:
Article
Short-term fate of phytodetritus in sediments across the Arabian Sea Oxygen Minimum Zone.
Published in:
Biogeosciences, 2008, v. 5, n. 1, p. 43, doi. 10.5194/bg-5-43-2008
By:
- Andersson, J. H.;
- Woulds, C.;
- Schwartz, M.;
- Cowie, G. L.;
- Levin, L. A.;
- Soetaert, K.;
- Middelburg, J. J.
Publication type:
Article
Comparison of Different Strategies to Reduce Acetate Formation in Escherichia coli.
Published in:
Biotechnology Progress, 2007, v. 23, n. 5, p. 1053
By:
- Marjan De Mey;
- Gaspard J. Lequeux;
- Joeri J. Beauprez;
- Jo Maertens;
- Ellen Van Horen;
- Wim K. Soetaert;
- Peter A. Vanrolleghem;
- Erick J. Vandamme
Publication type:
Article
Synthesis of bolaform biosurfactants by an engineered Starmerella bombicola yeast.
Published in:
Biotechnology & Bioengineering, 2016, v. 113, n. 12, p. 2644, doi. 10.1002/bit.26032
By:
- Van Bogaert, Inge N. A.;
- Buyst, Dieter;
- Martins, José C.;
- Roelants, Sophie L. K. W.;
- Soetaert, Wim K.
Publication type:
Article
High yield 1,3-propanediol production by rational engineering of the 3-hydroxypropionaldehyde bottleneck in Citrobacter werkmanii.
Published in:
Microbial Cell Factories, 2016, v. 15, p. 1, doi. 10.1186/s12934-016-0421-y
By:
- Maervoet, Veerle E. T.;
- De Maeseneire, Soie L.;
- Avci, Fatma G.;
- Beauprez, Joeri;
- Soetaert, Wim K.;
- De Mey, Marjan
Publication type:
Article
1,3-propanediol production with Citrobacter werkmanii DSM17579: effect of a dhaD knock-out.
Published in:
Microbial Cell Factories, 2014, v. 13, n. 1, p. 1, doi. 10.1186/1475-2859-13-70
By:
- Maervoet, Veerle E. T.;
- De Maeseneire, Sofie L.;
- Avci, Fatma G.;
- Beauprez, Joeri;
- Soetaert, Wim K.;
- De Mey, Marjan
Publication type:
Article
Bubbling insights: unveiling the true sophorolipid biosynthetic pathway by Starmerella bombicola.
Published in:
Biotechnology for Biofuels & Bioproducts, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13068-024-02557-7
By:
- Roelants, Sophie L. K. W.;
- Bovijn, Stijn;
- Bytyqi, Elvira;
- de Fooz, Nicolas;
- Luyten, Goedele;
- Castelein, Martijn;
- Van de Craen, Thibo;
- Diao, Zhoujian;
- Maes, Karolien;
- Delmulle, Tom;
- De Mol, Maarten;
- De Maeseneire, Sofie L.;
- Devreese, Bart;
- Soetaert, Wim K.
Publication type:
Article
Revision of the sophorolipid biosynthetic pathway in Starmerella bombicola based on new insights in the substrate profile of its lactone esterase.
Published in:
Biotechnology for Biofuels & Bioproducts, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13068-024-02533-1
By:
- Diao, Zhoujian;
- Roelants, Sophie L. K. W.;
- Luyten, Goedele;
- Goeman, Jan;
- Vandenberghe, Isabel;
- Van Driessche, Gonzalez;
- De Maeseneire, Sofie L.;
- Soetaert, Wim K.;
- Devreese, Bart
Publication type:
Article
Glacial meltwater and primary production as drivers for strong CO2 uptake in fjord and coastal waters adjacent to the Greenland Ice Sheet.
Published in:
Biogeosciences Discussions, 2014, v. 11, n. 12, p. 17925, doi. 10.5194/bgd-11-17925-2014
By:
- Meire, L.;
- Sogaard, D. H.;
- Mortensen, J.;
- Meysman, F. J. R.;
- Soetaert, K.;
- Arendt, K. E.;
- Juul-Pedersen, T.;
- Rysgaard, S.
Publication type:
Article
Impact of global change on coastal hypoxia.
Published in:
Biogeosciences Discussions, 2012, v. 9, n. 10, p. 14889, doi. 10.5194/bgd-9-14889-2012
By:
- Meire, L.;
- R. Soetaert, K. E.;
- R. Meysman, F. J.
Publication type:
Article
Microbial bioavailability regulates organic matter preservation in marine sediments.
Published in:
Biogeosciences Discussions, 2012, v. 9, n. 9, p. 13187, doi. 10.5194/bgd-9-13187-2012
By:
- Koho, K. A.;
- Nierop, K. G. J.;
- Moodley, L.;
- Middelburg, J. J.;
- Pozzato, L.;
- Soetaert, K.;
- van der Plicht, J.;
- Reichart, G.-J.
Publication type:
Article
Isotope data improve the predictive capabilities of a marine biogeochemical model.
Published in:
Biogeosciences Discussions, 2012, v. 9, n. 7, p. 9453, doi. 10.5194/bgd-9-9453-2012
By:
- Van Engeland, T.;
- De Kluijver, A.;
- Soetaert, K.;
- Meysman, F. J. R.;
- Middelburg, J. J.
Publication type:
Article
A 13C labelling study on carbon fluxes in Arctic plankton communities under elevated CO2 levels.
Published in:
Biogeosciences Discussions, 2012, v. 9, n. 7, p. 8571, doi. 10.5194/bgd-9-8571-2012
By:
- de Kluijver, A.;
- Soetaert, K.;
- Czerny, J.;
- Schulz, K. G.;
- Boxhammer, T.;
- Riebesell, U.;
- Middelburg, J. J.
Publication type:
Article
Nitrogen turnover in a tidal flat sediment: assimilation and dissimilation by bacteria and benthic microalgae.
Published in:
Biogeosciences Discussions, 2012, v. 9, n. 6, p. 6987, doi. 10.5194/bgd-9-6987-2012
By:
- Dähnke, K.;
- Moneta, A.;
- Veuger, B.;
- Soetaert, K.;
- Middelburg, J. J.
Publication type:
Article
Modelling the impact of Siboglinids on the biogeochemistry of the Captain Arutyunov mud volcano (Gulf of Cadiz).
Published in:
Biogeosciences Discussions, 2012, v. 9, n. 6, p. 6683, doi. 10.5194/bgd-9-6683-2012
By:
- Soetaert, K.;
- Van Oevelen, D.;
- Sommer, S.
Publication type:
Article
Modeling biogeochemical processes in sediments from the Rhône River prodelta area (NW Mediterranean Sea).
Published in:
Biogeosciences Discussions, 2011, v. 8, n. 1, p. 549, doi. 10.5194/bgd-8-549-2011
By:
- Pastor, L.;
- Cathalot, C.;
- Deflandre, B.;
- Viollier, E.;
- Soetaert, K.;
- Meysman, F. J. R.;
- Ulses, C.;
- Metzger, E.;
- Rabouille, C.
Publication type:
Article
Long-term record of pH in the Dutch coastal zone: a major role for eutrophication-induced changes.
Published in:
Biogeosciences Discussions, 2010, v. 7, n. 3, p. 4127, doi. 10.5194/bgd-7-4127-2010
By:
- Provoost, P.;
- van Heuven, S.;
- Soetaert, K.;
- Laane, R.;
- Middelburg, J. J.
Publication type:
Article
Carbon fluxes in natural plankton communities under elevated CO2 levels: a stable isotope labeling study.
Published in:
Biogeosciences Discussions, 2010, v. 7, n. 3, p. 3257, doi. 10.5194/bgd-7-3257-2010
By:
- de Kluijver, A.;
- Soetaert, K.;
- Schulz, K. G.;
- Riebesell, U.;
- Bellerby, R. G. J.;
- Middelburg, J. J.
Publication type:
Article
From heterotrophy to autotrophy: a freshwater estuarine ecosystem recovering from hypereutrophication.
Published in:
Biogeosciences Discussions, 2009, v. 6, n. 3, p. 5431, doi. 10.5194/bgd-6-5431-2009
By:
- Cox, T. J. S.;
- Maris, T.;
- Soetaert, K.;
- Conley, D. J.;
- Van Damme, S.;
- Meire, P.;
- Middelburg, J. J.;
- Vos, M.;
- Struyf, E.
Publication type:
Article
Factors governing the pH in a heterotrophic, turbid, tidal estuary.
Published in:
Biogeosciences Discussions, 2009, v. 6, n. 1, p. 197, doi. 10.5194/bgd-6-197-2009
By:
- Hofmann, A. F.;
- Meysman, F. J. R.;
- Soetaert, K.;
- Middelburg, J. J.
Publication type:
Article
A mathematical modelling of bloom of the coccolithophore Emiliania huxleyi in a mesocosm experiment.
Published in:
Biogeosciences Discussions, 2008, v. 5, n. 1, p. 787, doi. 10.5194/bgd-5-787-2008
By:
- Joassin, P.;
- Delille, B.;
- Soetaert, K.;
- Borges, A. V.;
- Chou, L.;
- Engel, A.;
- Gattuso, J.-P.;
- Harlay, J.;
- Riebesell, U.;
- Suykens, K.;
- Gregoire, M.
Publication type:
Article
Nitrogen and carbon dynamics in the Scheldt estuary at the beginning of the 21st century - a modelling study.
Published in:
Biogeosciences Discussions, 2008, v. 5, n. 1, p. 83, doi. 10.5194/bgd-5-83-2008
By:
- Hofmann, A. F.;
- Soetaert, K.;
- Middelburg, J. J.
Publication type:
Article
A step-by-step procedure for pH model construction in aquatic systems.
Published in:
Biogeosciences Discussions, 2007, v. 4, n. 5, p. 3723, doi. 10.5194/bgd-4-3723-2007
By:
- Hofmann, A. F.;
- Meysman, F. J. R.;
- Soetaert, K.;
- Middelburg, J. J.
Publication type:
Article
Short-term fate of phytodetritus across the Arabian Sea Oxygen Minimum Zone.
Published in:
Biogeosciences Discussions, 2007, v. 4, n. 4, p. 2493, doi. 10.5194/bgd-4-2493-2007
By:
- Andersson, J. H.;
- Woulds, C.;
- Schwartz, M.;
- Cowie, G. L.;
- Levin, L. A.;
- Soetaert, K.;
- Middelburg, J. J.
Publication type:
Article
Variable Importance of Macrofaunal Functional Biodiversity for Biogeochemical Cycling in Temperate Coastal Sediments.
Published in:
Ecosystems, 2014, v. 17, n. 4, p. 720, doi. 10.1007/s10021-014-9755-7
By:
- Braeckman, U.;
- Foshtomi, M.;
- Gansbeke, D.;
- Meysman, F.;
- Soetaert, K.;
- Vincx, M.;
- Vanaverbeke, J.
Publication type:
Article
Transient metabolic modeling of Escherichia coli MG1655 and MG1655 Δ ackA- pta, Δ poxB Δp ppc ppc-p37 for recombinant β-galactosidase production.
Published in:
Journal of Industrial Microbiology & Biotechnology, 2010, v. 37, n. 8, p. 793, doi. 10.1007/s10295-010-0724-7
By:
- De Mey, Marjan;
- Lequeux, Gaspard J.;
- Beauprez, Joeri J.;
- Maertens, Jo;
- Waegeman, Hendrik J.;
- Van Bogaert, Inge N.;
- Foulquié-Moreno, Maria R.;
- Charlier, Daniel;
- Soetaert, Wim K.;
- Vanrolleghem, Peter A.;
- Vandamme, Erick J.
Publication type:
Article
Critical transitions in suspended sediment dynamics in a temperate meso-tidal estuary.
Published in:
Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-48978-5
By:
- Cox, T. J. S.;
- Maris, T.;
- Van Engeland, T.;
- Soetaert, K.;
- Meire, P.
Publication type:
Article
Budget of organic carbon in the North- Western Mediterranean open sea over the period 2004-2008 using 3-D coupled physical-biogeochemical modeling.
Published in:
Journal of Geophysical Research. Oceans, 2016, v. 121, n. 9, p. 7026, doi. 10.1002/2016JC011818
By:
- Ulses, C.;
- Auger, P.-A.;
- Soetaert, K.;
- Marsaleix, P.;
- Diaz, F.;
- Coppola, L.;
- Herrmann, M.J.;
- Kessouri, F.;
- Estournel, C.
Publication type:
Article
Modeling the nitrogen cycling and plankton productivity in the Black Sea using a three-dimensional interdisciplinary model.
Published in:
Journal of Geophysical Research. Oceans, 2004, v. 109, n. C5, p. n/a, doi. 10.1029/2001JC001014
By:
- Grégoire, M.;
- Soetaert, K.;
- Nezlin, N.;
- Kostianoy, A.
Publication type:
Article
Genotyping and strain distribution of Mycobacterium avium subspecies hominissuis isolated from humans and pigs in Belgium, 2011-2013.
Published in:
Eurosurveillance (15607917), 2016, v. 21, n. 3, p. 18, doi. 10.2807/1560-7917.ES.2016.21.3.30111
By:
- Vluggen, C.;
- Soetaert, K.;
- Duytschaever, L.;
- Denoël, J.;
- Fauville-Dufaux, M.;
- Smeets, F.;
- Bruffaerts, N.;
- Huygen, K.;
- Fretin, D.;
- Rigouts, L.;
- Saegerman, C.;
- Mathys, V.
Publication type:
Article
MariClus: Your One-Stop Platform for Information on Marine Natural Products, Their Gene Clusters and Producing Organisms.
Published in:
Marine Drugs, 2023, v. 21, n. 8, p. 449, doi. 10.3390/md21080449
By:
- Hermans, Cedric;
- De Mol, Maarten Lieven;
- Mispelaere, Marieke;
- De Rop, Anne-Sofie;
- Rombaut, Jeltien;
- Nusayr, Tesneem;
- Creamer, Rebecca;
- De Maeseneire, Sofie L.;
- Soetaert, Wim K.;
- Hulpiau, Paco
Publication type:
Article
Novel Alkaloids from Marine Actinobacteria: Discovery and Characterization.
Published in:
Marine Drugs, 2022, v. 20, n. 1, p. 6, doi. 10.3390/md20010006
By:
- De Rop, Anne-Sofie;
- Rombaut, Jeltien;
- Willems, Thomas;
- De Graeve, Marilyn;
- Vanhaecke, Lynn;
- Hulpiau, Paco;
- De Maeseneire, Sofie L.;
- De Mol, Maarten L.;
- Soetaert, Wim K.
Publication type:
Article
Promoter knock-in: a novel rational method forthe fine tuning of genes.
Published in:
BMC Biotechnology, 2010, v. 10, p. 26, doi. 10.1186/1472-6750-10-26
By:
- De Mey, Marjan;
- Maertens, Jo;
- Boogmans, Sarah;
- K Soetaert, Wim;
- Vandamme, Erick J.;
- Cunin, Raymond;
- Foulquié-Moreno, Maria R.
Publication type:
Article
The meiobenthos of the North Sea: density, biomass trends and distribution of copepod communities*.
Published in:
ICES Journal of Marine Science / Journal du Conseil, 1992, v. 49, n. 1, p. 23, doi. 10.1093/icesjms/49.1.23
By:
- Huys, R.;
- Herman, P. M. J.;
- Heip, C. H. R.;
- Soetaert, K.
Publication type:
Article
Trends in biomass, density and diversity of North Sea macrofauna.
Published in:
ICES Journal of Marine Science / Journal du Conseil, 1992, v. 49, n. 1, p. 13, doi. 10.1093/icesjms/49.1.13
By:
- Heip, C.;
- Basford, D.;
- Craeymeersch, J. A.;
- Dewarumez, J. M.;
- Dörjes, J.;
- de Wilde, P.;
- Duineveld, G.;
- Eleftheriou, A.;
- Herman, P. M. J.;
- Niermann, U.;
- Kingston, P.;
- Künitzer, A.;
- Rachor, E.;
- Rumohr, H.;
- Soetaert, K.;
- Soltwedel, T.
Publication type:
Article
Alkaloids from Marine Fungi: Promising Antimicrobials.
Published in:
Antibiotics (2079-6382), 2020, v. 9, n. 6, p. 340, doi. 10.3390/antibiotics9060340
By:
- Willems, Thomas;
- De Mol, Maarten L.;
- De Bruycker, Aleksandar;
- De Maeseneire, Sofie L.;
- Soetaert, Wim K.
Publication type:
Article
Rapid isolation of fungal genomic DNA suitable for long distance PCR.
Published in:
Biotechnology Letters, 2007, v. 29, n. 12, p. 1845, doi. 10.1007/s10529-007-9483-6
By:
- De Maeseneire, S. L.;
- Van Bogaert, I. N.;
- Dauvrin, T.;
- Soetaert, W. K.;
- Vandamme, E. J.
Publication type:
Article
Demonstrating Pilot-Scale Gas Fermentation for Acetate Production from Biomass-Derived Syngas Streams.
Published in:
Fermentation (Basel), 2024, v. 10, n. 6, p. 285, doi. 10.3390/fermentation10060285
By:
- Acuña López, Pedro;
- Rebecchi, Stefano;
- Vlaeminck, Elodie;
- Quataert, Koen;
- Frilund, Christian;
- Laatikainen-Luntama, Jaana;
- Hiltunen, Ilkka;
- De Winter, Karel;
- Soetaert, Wim K.
Publication type:
Article

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