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DIFFERENTIAL HIVE PLOTS: SEEING NETWORKS CHANGE.
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- Leonardo, 2017, v. 50, n. 5, p. 504, doi. 10.1162/LEON_a_01278
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Prokaryotic responses to a warm temperature anomaly in northeast subarctic Pacific waters.
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- Communications Biology, 2021, v. 4, n. 1, p. 1, doi. 10.1038/s42003-021-02731-9
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- Article
A physical map of the highly heterozygous Populus genome: integration with the genome sequence and genetic map and analysis of haplotype variation.
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- Plant Journal, 2007, v. 50, n. 6, p. 1063, doi. 10.1111/j.1365-313X.2007.03112.x
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Erratum: The anatomy of successful computational biology software.
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- Nature Biotechnology, 2014, v. 32, n. 6, p. 592, doi. 10.1038/nbt0614-592b
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The anatomy of successful computational biology software.
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- Nature Biotechnology, 2013, v. 31, n. 10, p. 894, doi. 10.1038/nbt.2721
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- Article
A first look at entire human methylomes.
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- Nature Biotechnology, 2009, v. 27, n. 12, p. 1130, doi. 10.1038/nbt1209-1130
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- Article
Points of Significance: Simple linear regression.
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- Nature Methods, 2015, v. 12, n. 11, p. 999, doi. 10.1038/nmeth.3627
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Corrigendum: Bayesian statistics.
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- Nature Methods, 2015, v. 12, n. 11, p. 1098, doi. 10.1038/nmeth1115-1098b
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- Article
Points of Significance: Association, correlation and causation.
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- Nature Methods, 2015, v. 12, n. 10, p. 899, doi. 10.1038/nmeth.3587
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Erratum: Power and sample size.
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- Nature Methods, 2015, v. 12, n. 9, p. 893, doi. 10.1038/nmeth0915-893e
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- Article
Points of Significance: Bayesian networks.
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- Nature Methods, 2015, v. 12, n. 9, p. 799, doi. 10.1038/nmeth.3550
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- Article
Points of View: Unentangling complex plots.
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- Nature Methods, 2015, v. 12, n. 7, p. 591, doi. 10.1038/nmeth.3451
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- Article
Points of Significance: Sampling distributions and the bootstrap.
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- Nature Methods, 2015, v. 12, n. 6, p. 477, doi. 10.1038/nmeth.3414
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- Article
Points of significance: Bayesian statistics.
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- Nature Methods, 2015, v. 12, n. 5, p. 377, doi. 10.1038/nmeth.3368
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Points of Significance: Bayes' theorem.
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- Nature Methods, 2015, v. 12, n. 4, p. 277, doi. 10.1038/nmeth.3335
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- Article
Points of Significance: Split plot design.
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- Nature Methods, 2015, v. 12, n. 3, p. 165, doi. 10.1038/nmeth.3293
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Points of significance: Sources of variation.
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- Nature Methods, 2015, v. 12, n. 1, p. 5, doi. 10.1038/nmeth.3224
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Points of Significance: Two-factor designs.
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- Nature Methods, 2014, v. 11, n. 12, p. 1187, doi. 10.1038/nmeth.3180
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- Article
Points of Significance: Nested designs.
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- Nature Methods, 2014, v. 11, n. 10, p. 977, doi. 10.1038/nmeth.3137
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Points of Significance: Replication.
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- Nature Methods, 2014, v. 11, n. 9, p. 879, doi. 10.1038/nmeth.3091
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Points of significance: Analysis of variance and blocking.
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- Nature Methods, 2014, v. 11, n. 7, p. 699, doi. 10.1038/nmeth.3005
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- Article
Corrigendum: Nonparametric tests.
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- Nature Methods, 2014, v. 11, n. 7, p. 773, doi. 10.1038/nmeth0714-773d
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- Article
Points of significance: Designing comparative experiments.
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- Nature Methods, 2014, v. 11, n. 6, p. 597, doi. 10.1038/nmeth.2974
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Points of significance: Nonparametric tests.
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- Nature Methods, 2014, v. 11, n. 5, p. 467, doi. 10.1038/nmeth.2937
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Points of significance: Comparing samples-part II.
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- Nature Methods, 2014, v. 11, n. 4, p. 355, doi. 10.1038/nmeth.2900
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Points of significance: Comparing samples-part I.
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- Nature Methods, 2014, v. 11, n. 3, p. 215, doi. 10.1038/nmeth.2858
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Erratum: Power and sample size.
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- Nature Methods, 2014, v. 11, n. 2, p. 210, doi. 10.1038/nmeth0214-210d
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Points of Significance: Visualizing samples with box plots.
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- Nature Methods, 2014, v. 11, n. 2, p. 119, doi. 10.1038/nmeth.2813
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Points of significance: Power and sample size.
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- Nature Methods, 2013, v. 10, n. 12, p. 1139, doi. 10.1038/nmeth.2738
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Points of significance: Significance, P values and t-tests.
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- Nature Methods, 2013, v. 10, n. 11, p. 1041, doi. 10.1038/nmeth.2698
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Reply to: "Against storytelling of scientific results".
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- Nature Methods, 2013, v. 10, n. 11, p. 1046, doi. 10.1038/nmeth.2700
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Points of Significance: Error bars.
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- Nature Methods, 2013, v. 10, n. 10, p. 921, doi. 10.1038/nmeth.2659
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Points of significance: Importance of being uncertain.
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- Nature Methods, 2013, v. 10, n. 9, p. 809, doi. 10.1038/nmeth.2613
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- Article
Points of view: Storytelling.
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- Nature Methods, 2013, v. 10, n. 8, p. 687, doi. 10.1038/nmeth.2571
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Points of view: Multidimensional data.
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- Nature Methods, 2013, v. 10, n. 7, p. 595, doi. 10.1038/nmeth.2531
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Points of view: Plotting symbols.
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- Nature Methods, 2013, v. 10, n. 6, p. 451, doi. 10.1038/nmeth.2490
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Points of view: Elements of visual style.
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- Nature Methods, 2013, v. 10, n. 5, p. 371, doi. 10.1038/nmeth.2444
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Points of view: Labels and callouts.
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- Nature Methods, 2013, v. 10, n. 4, p. 275, doi. 10.1038/nmeth.2405
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Points of view: Axes, ticks and grids.
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- Nature Methods, 2013, v. 10, n. 3, p. 183, doi. 10.1038/nmeth.2337
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Hive Panel Explorer: an interactive network visualization tool.
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- Bioinformatics, 2021, v. 37, n. 3, p. 436, doi. 10.1093/bioinformatics/btaa683
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- Article
Hive plots—rational approach to visualizing networks.
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- Briefings in Bioinformatics, 2012, v. 13, n. 5, p. 627, doi. 10.1093/bib/bbr069
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Enhancing knowledge discovery from cancer genomics data with Galaxy.
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- GigaScience, 2017, v. 6, n. 5, p. 1, doi. 10.1093/gigascience/gix015
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Genome-resolved correlation mapping links microbial community structure to metabolic interactions driving methane production from wastewater.
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- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-40907-5
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PICS: Probabilistic Inference for ChIP-seq.
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- Biometrics, 2011, v. 67, n. 1, p. 151, doi. 10.1111/j.1541-0420.2010.01441.x
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An Epigenomic Approach to Improving Response to Neoadjuvant Cisplatin Chemotherapy in Bladder Cancer.
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- Biomolecules (2218-273X), 2016, v. 6, n. 3, p. 37, doi. 10.3390/biom6030037
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Frequent mutation of histone-modifying genes in non-Hodgkin lymphoma.
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- Nature, 2011, v. 476, n. 7360, p. 298, doi. 10.1038/nature10351
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Fast Diploidization in Close Mesopolyploid Relatives of Arabidopsis.
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- Plant Cell, 2010, v. 22, n. 7, p. 2277, doi. 10.1105/tpc.110.074526
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A set of BAC clones spanning the human genome.
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- Nucleic Acids Research, 2004, v. 32, n. 12, p. 3651, doi. 10.1093/nar/gkh700
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An efficient strategy for large-scale high-throughput transposon-mediated sequencing of cDNA clones.
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- Nucleic Acids Research, 2002, v. 30, n. 11, p. 2460, doi. 10.1093/nar/30.11.2460
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Enhancing clinical genomic accuracy with panelGC: a novel metric and tool for quantifying and monitoring GC biases in hybridization capture panel sequencing.
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- Briefings in Bioinformatics, 2024, v. 25, n. 5, p. 1, doi. 10.1093/bib/bbae442
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- Article