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HiFi metagenomic sequencing enables assembly of accurate and complete genomes from human gut microbiota.
- Published in:
- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-34149-0
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- Article
The nucleolus is the site for inflammatory RNA decay during infection.
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- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-32856-2
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- Article
Viral coinfection promotes tuberculosis immunopathogenesis by type I IFN signaling-dependent impediment of Th1 cell pulmonary influx.
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- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-30914-3
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- Article
BarleyNet: A Network-Based Functional Omics Analysis Server for Cultivated Barley, Hordeum vulgare L.
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- Frontiers in Plant Science, 2020, p. 1, doi. 10.3389/fpls.2020.00098
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- Article
HumanNet v2: human gene networks for disease research.
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- Nucleic Acids Research, 2019, v. 47, n. D1, p. D573, doi. 10.1093/nar/gky1126
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- Article
GWAB: a web server for the network-based boosting of human genome-wide association data.
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- Nucleic Acids Research, 2017, v. 45, n. W1, p. W154, doi. 10.1093/nar/gkx284
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- Article
COEXPEDIA: exploring biomedical hypotheses via co-expressions associated with medical subject headings (MeSH).
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- Nucleic Acids Research, 2017, v. 45, n. D1, p. D389, doi. 10.1093/nar/gkw868
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- Article
SoyNet: a database of co-functional networks for soybean Glycine max.
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- Nucleic Acids Research, 2017, v. 45, n. D1, p. D1082, doi. 10.1093/nar/gkw704
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- Article
Function-driven discovery of disease genes in zebrafish using an integrated genomics big data resource.
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- Nucleic Acids Research, 2016, v. 44, n. 20, p. 9611, doi. 10.1093/nar/gkw897
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- Article
An integrated systems biology approach identifies positive cofactor 4 as a factor that increases reprogramming efficiency.
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- Nucleic Acids Research, 2016, v. 44, n. 3, p. 1203, doi. 10.1093/nar/gkv1468
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- Article
MouseNet v2: a database of gene networks for studying the laboratory mouse and eight other model vertebrates.
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- Nucleic Acids Research, 2016, v. 44, n. 1, p. D848, doi. 10.1093/nar/gkv1155
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- Article
FlyNet: a versatile network prioritization server for the Drosophila community.
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- Nucleic Acids Research, 2015, v. 43, n. W1, p. W91, doi. 10.1093/nar/gkv453
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- Article
RiceNet v2: an improved network prioritization server for rice genes.
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- Nucleic Acids Research, 2015, v. 43, n. W1, p. W122, doi. 10.1093/nar/gkv253
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- Article
AraNet v2: an improved database of co-functional gene networks for the study of Arabidopsis thaliana and 27 other nonmodel plant species.
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- Nucleic Acids Research, 2015, v. 43, n. D1, p. D996, doi. 10.1093/nar/gku1053
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- Article
MORPHIN: a web tool for human disease research by projecting model organism biology onto a human integrated gene network.
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- Nucleic Acids Research, 2014, v. 42, n. W1, p. W147, doi. 10.1093/nar/gku434
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- Article
WormNet v3: a network-assisted hypothesis-generating server for Caenorhabditis elegans.
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- Nucleic Acids Research, 2014, v. 42, n. W1, p. W76, doi. 10.1093/nar/gku367
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- Article
YeastNet v3: a public database of data-specific and integrated functional gene networks for Saccharomyces cerevisiae.
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- Nucleic Acids Research, 2014, v. 42, n. D1, p. D731, doi. 10.1093/nar/gkt981
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- Article
JiffyNet: a web-based instant protein network modeler for newly sequenced species.
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- Nucleic Acids Research, 2013, v. 41, p. W192, doi. 10.1093/nar/gkt419
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- Article
Dysregulation of T<sub>FH</sub>-B-T<sub>RM</sub> lymphocyte cooperation is associated with unfavorable anti-PD-1 responses in EGFR-mutant lung cancer.
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- Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-26362-0
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- Article
Chaperone-like protein DAY plays critical roles in photomorphogenesis.
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- Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-24446-5
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- Article
Human reference gut microbiome catalog including newly assembled genomes from under-represented Asian metagenomes.
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- Genome Medicine, 2021, v. 13, n. 1, p. 1, doi. 10.1186/s13073-021-00950-7
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- Article
Rational association of genes with traits using a genome-scale gene network for Arabidopsis thaliana.
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- Nature Biotechnology, 2010, v. 28, n. 2, p. 149, doi. 10.1038/nbt.1603
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- Article
A single gene network accurately predicts phenotypic effects of gene perturbation in Caenorhabditis elegans.
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- Nature Genetics, 2008, v. 40, n. 2, p. 181, doi. 10.1038/ng.2007.70
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- Article
Genome-resolved metagenomics: a game changer for microbiome medicine.
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- Experimental & Molecular Medicine EMM, 2024, v. 56, n. 7, p. 1501, doi. 10.1038/s12276-024-01262-7
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- Article
The importance of enhancer methylation for epigenetic regulation of tumorigenesis in squamous lung cancer.
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- Experimental & Molecular Medicine EMM, 2022, v. 54, n. 1, p. 12, doi. 10.1038/s12276-021-00718-4
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- Article
Single-cell network biology for resolving cellular heterogeneity in human diseases.
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- Experimental & Molecular Medicine EMM, 2020, v. 52, n. 7, p. 1798, doi. 10.1038/s12276-020-00528-0
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- Article
Genome-wide identification of differentially methylated promoters and enhancers associated with response to anti-PD-1 therapy in non-small cell lung cancer.
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- Experimental & Molecular Medicine EMM, 2020, p. 1550, doi. 10.1038/s12276-020-00493-8
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- Article
Microvesicles from brain-extract-treated mesenchymal stem cells improve neurological functions in a rat model of ischemic stroke.
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- Scientific Reports, 2016, p. 33038, doi. 10.1038/srep33038
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- Article
Network-assisted investigation of virulence and antibiotic-resistance systems in Pseudomonas aeruginosa.
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- Scientific Reports, 2016, p. 26223, doi. 10.1038/srep26223
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- Article
Systematic comparison of variant calling pipelines using gold standard personal exome variants.
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- Scientific Reports, 2015, p. 17875, doi. 10.1038/srep17875
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- Article
MaizeNet: a co‐functional network for network‐assisted systems genetics in Zea mays.
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- Plant Journal, 2019, v. 99, n. 3, p. 571, doi. 10.1111/tpj.14341
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- Article
Integrative single-cell characterization of a frugivorous and an insectivorous bat kidney and pancreas.
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- Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-023-44186-y
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- Article
Author Correction: Integrative single-cell characterization of a frugivorous and an insectivorous bat kidney and pancreas.
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- 2024
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- Correction Notice
Integrative single-cell characterization of a frugivorous and an insectivorous bat kidney and pancreas.
- Published in:
- Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-023-44186-y
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- Publication type:
- Article
Therapeutic community-oriented day treatment program for Korean women with alcohol use disorder: a non-randomized pilot feasibility trial.
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- Addiction Science & Clinical Practice, 2022, v. 17, n. 1, p. 1, doi. 10.1186/s13722-022-00297-3
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- Publication type:
- Article
Therapeutic community-oriented day treatment program for Korean women with alcohol use disorder: a non-randomized pilot feasibility trial.
- Published in:
- Addiction Science & Clinical Practice, 2022, v. 17, n. 1, p. 1, doi. 10.1186/s13722-022-00297-3
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- Article
Co-Inheritance Analysis within the Domains of Life Substantially Improves Network Inference by Phylogenetic Profiling.
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- PLoS ONE, 2015, v. 10, n. 9, p. 1, doi. 10.1371/journal.pone.0139006
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- Article
Pathway-Dependent Effectiveness of Network Algorithms for Gene Prioritization.
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- PLoS ONE, 2015, v. 10, n. 6, p. 1, doi. 10.1371/journal.pone.0130589
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- Article
Modes of Interaction between Individuals Dominate the Topologies of Real World Networks.
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- PLoS ONE, 2015, v. 10, n. 3, p. 1, doi. 10.1371/journal.pone.0121248
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- Article
COVID-GWAB: A Web-Based Prediction of COVID-19 Host Genes via Network Boosting of Genome-Wide Association Data.
- Published in:
- Biomolecules (2218-273X), 2022, v. 12, n. 10, p. N.PAG, doi. 10.3390/biom12101446
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- Article
EcoliNet: a database of cofunctional gene network for Escherichia coli.
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- Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav001
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- Article
The planar cell polarity effector Fuz is essential for targeted membrane trafficking, ciliogenesis and mouse embryonic development.
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- Nature Cell Biology, 2009, v. 11, n. 10, p. 1225, doi. 10.1038/ncb1966
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- Article
Patterns of sequence conservation at termini of long terminal repeat (LTR) retrotransposons and DNA transposons in the human genome: lessons from phage Mu.
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- Nucleic Acids Research, 2003, v. 31, n. 15, p. 4531, doi. 10.1093/nar/gkg499
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- Article
Network-guided genetic screening: building, testing and using gene networks to predict gene function.
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- Briefings in Functional Genomics & Proteomics, 2008, v. 7, n. 3, p. 217, doi. 10.1093/bfgp/eln020
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- Article
A single gene of a commensal microbe affects host susceptibility to enteric infection.
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- Nature Communications, 2016, v. 7, n. 5, p. 11606, doi. 10.1038/ncomms11606
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- Article
MUFFINN: cancer gene discovery via network analysis of somatic mutation data.
- Published in:
- Genome Biology, 2016, v. 17, p. 1, doi. 10.1186/s13059-016-0989-x
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- Publication type:
- Article
A showcase of future plant biology: moving towards next-generation plant genetics assisted by genome sequencing and systems biology.
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- Genome Biology, 2014, v. 15, n. 5, p. 305, doi. 10.1186/gb4176
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- Article
RIDDLE: reflective diffusion and local extension reveal functional associations for unannotated gene sets via proximity in a gene network.
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- Genome Biology, 2012, v. 13, n. 12, p. 1, doi. 10.1186/gb-2012-13-12-r125
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- Article
The Impact of Job Retention on Continuous Growth of Engineering and Informational Technology SMEs in South Korea.
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- Sustainability (2071-1050), 2019, v. 11, n. 18, p. 5005, doi. 10.3390/su11185005
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- Article
Network perturbation by recurrent regulatory variants in cancer.
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- PLoS Computational Biology, 2017, v. 13, n. 3, p. 1, doi. 10.1371/journal.pcbi.1005449
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- Article