Found: 26
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Clusters of mammalian conserved RNA structures in UTRs associate with RBP binding sites.
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- NAR Genomics & Bioinformatics, 2024, v. 6, n. 3, p. 1, doi. 10.1093/nargab/lqae089
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- Article
Full-length RNA structure prediction of the HIV-1 genome reveals a conserved core domain.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10168, doi. 10.1093/nar/gkv1039
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- Article
Optimizing RNA structures by sequence extensions using RNAcop.
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- Nucleic Acids Research, 2015, v. 43, n. 17, p. 8135, doi. 10.1093/nar/gkv813
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- Article
The RNAsnp web server: predicting SNP effects on local RNA secondary structure.
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- Nucleic Acids Research, 2013, v. 41, p. W475, doi. 10.1093/nar/gkt291
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- Article
The PETfold and PETcofold web servers for intra- and intermolecular structures of multiple RNA sequences.
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- Nucleic Acids Research, 2011, v. 39, n. suppl_2, p. W107, doi. 10.1093/nar/gkr248
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- Article
Unifying evolutionary and thermodynamic information for RNA folding of multiple alignments.
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- Nucleic Acids Research, 2008, v. 36, n. 20, p. 6355, doi. 10.1093/nar/gkn544
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- Article
The impact of PrsA over-expression on the Bacillus subtilis transcriptome during fed-batch fermentation of alpha-amylase production.
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- Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.909493
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- Article
Proteomic profiling of the thrombin-activated canine platelet secretome (CAPS).
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- PLoS ONE, 2019, v. 14, n. 11, p. 1, doi. 10.1371/journal.pone.0224891
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- Article
Hierarchical folding of multiple sequencealignments for the prediction of structures andRNA-RNA interactions.
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- Algorithms for Molecular Biology, 2010, v. 5, p. 22, doi. 10.1186/1748-7188-5-22
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- Article
SNHG5 promotes colorectal cancer cell survival by counteracting STAU1-mediated mRNA destabilization.
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- Nature Communications, 2016, v. 7, n. 12, p. 13875, doi. 10.1038/ncomms13875
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- Article
Development of the Entorhinal Cortex Occurs via Parallel Lamination During Neurogenesis.
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- Frontiers in Neuroanatomy, 2021, v. 14, p. N.PAG, doi. 10.3389/fnana.2021.663667
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- Article
Modelling Nonalcoholic Steatohepatitis In Vivo—A Close Transcriptomic Similarity Supports the Guinea Pig Disease Model.
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- Biomedicines, 2021, v. 9, n. 9, p. 1198, doi. 10.3390/biomedicines9091198
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- Article
Does rapid sequence divergence preclude RNA structure conservation in vertebrates?
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- Nucleic Acids Research, 2022, v. 50, n. 5, p. 2452, doi. 10.1093/nar/gkac067
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- Article
CRISPRroots: on- and off-target assessment of RNA-seq data in CRISPR–Cas9 edited cells.
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- Nucleic Acids Research, 2022, v. 50, n. 4, p. e20, doi. 10.1093/nar/gkab1131
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- Article
DotAligner: identification and clustering of RNA structure motifs.
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- Genome Biology, 2017, v. 18, p. 1, doi. 10.1186/s13059-017-1371-3
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- Article
Identification and characterization of novel conserved RNA structures in Drosophila.
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- BMC Genomics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12864-018-5234-4
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- Article
RNAsnp: Efficient Detection of Local RNA Secondary Structure Changes Induced by SNPs.
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- Human Mutation, 2013, v. 34, n. 6, p. 925, doi. 10.1002/humu.22323
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- Article
RNAsnp: Efficient Detection of Local RNA Secondary Structure Changes Induced by SNPs.
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- Human Mutation, 2013, v. 34, n. 4, p. 546, doi. 10.1002/humu.22273
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- Article
Generating universal anti-CD19 CAR T cells with a defined memory phenotype by CRISPR/Cas9 editing and safety evaluation of the transcriptome.
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- Frontiers in Immunology, 2024, p. 01, doi. 10.3389/fimmu.2024.1401683
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- Article
Multiple Sequence Alignments Enhance Boundary Definition of RNA Structures.
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- Genes, 2018, v. 9, n. 12, p. 604, doi. 10.3390/genes9120604
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- Article
Structured RNAs and synteny regions in the pig genome.
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- BMC Genomics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2164-15-459
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- Article
Transcripts with in silico predicted RNA structure are enriched everywhere in the mouse brain.
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- BMC Genomics, 2012, v. 13, n. 1, p. 214, doi. 10.1186/1471-2164-13-214
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- Article
RNAscClust: clustering RNA sequences using structure conservation and graph based motifs.
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- Bioinformatics, 2017, v. 33, n. 14, p. 2089, doi. 10.1093/bioinformatics/btx114
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RILogo: visualizing RNA–RNA interactions.
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- Bioinformatics, 2012, v. 28, n. 19, p. 2523, doi. 10.1093/bioinformatics/bts461
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- Article
PETcofold: predicting conserved interactions and structures of two multiple alignments of RNA sequences.
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- Bioinformatics, 2011, v. 27, n. 2, p. 211, doi. 10.1093/bioinformatics/btq634
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- Article
RNA-Seq Study on the Longissimus thoracis Muscle of Italian Large White Pigs Fed Extruded Linseed with or without Antioxidants and Polyphenols.
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- Animals (2076-2615), 2023, v. 13, n. 7, p. 1187, doi. 10.3390/ani13071187
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- Article