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Goethe's dream. Challenges and opportunities for synthetic biology.
- Published in:
- EMBO Reports, 2009, v. 10, p. S28, doi. 10.1038/embor.2009.120
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- Publication type:
- Article
Population Dynamics of Autocatalytic Sets in a Compartmentalized Spatial World.
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- Life (2075-1729), 2018, v. 8, n. 3, p. 33, doi. 10.3390/life8030033
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- Publication type:
- Article
Transcriptional Dynamics of Two Seed Compartments with Opposing Roles in Arabidopsis Seed Germination.
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- Plant Physiology, 2013, v. 163, n. 1, p. 205, doi. 10.1104/pp.113.223511
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- Publication type:
- Article
Matching island topologies to problem structure in parallel evolutionary algorithms.
- Published in:
- Soft Computing - A Fusion of Foundations, Methodologies & Applications, 2013, v. 17, n. 7, p. 1209, doi. 10.1007/s00500-013-0995-9
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- Publication type:
- Article
GAssist vs. BioHEL: critical assessment of two paradigms of genetics-based machine learning.
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- Soft Computing - A Fusion of Foundations, Methodologies & Applications, 2013, v. 17, n. 6, p. 953, doi. 10.1007/s00500-013-1016-8
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- Publication type:
- Article
Prediction of topological contacts in proteins using learning classifier systems.
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- Soft Computing - A Fusion of Foundations, Methodologies & Applications, 2009, v. 13, n. 3, p. 245, doi. 10.1007/s00500-008-0318-8
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- Publication type:
- Article
Is There an Optimal Level of Open-Endedness in Prebiotic Evolution?
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- Origins of Life & Evolution of the Biosphere, 2012, v. 42, n. 5, p. 469, doi. 10.1007/s11084-012-9309-y
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- Publication type:
- Article
Expression, Localization, and Protein Interactions of the Partitioning Proteins in the Gonococcal Type IV Secretion System.
- Published in:
- Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.784483
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- Publication type:
- Article
Synthesis and cell-free cloning of DNA libraries using programmable microfluidics.
- Published in:
- Nucleic Acids Research, 2016, v. 44, n. 4, p. 1, doi. 10.1093/nar/gkv1087
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- Publication type:
- Article
A thermodynamic switch modulates abscisic acid receptor sensitivity.
- Published in:
- EMBO Journal, 2011, v. 30, n. 20, p. 4171, doi. 10.1038/emboj.2011.294
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- Publication type:
- Article
Reduced Expression of the Co-regulator TLE1 in Type 2 Diabetes Is Associated with Increased Islet α-Cell Number.
- Published in:
- Endocrinology, 2020, v. 161, n. 4, p. 1, doi. 10.1210/endocr/bqaa011
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- Publication type:
- Article
Algorithms and models for complex natural systems.
- Published in:
- 2015
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- Publication type:
- Editorial
Exploring programmable self-assembly in non-DNA based molecular computing.
- Published in:
- Natural Computing, 2013, v. 12, n. 4, p. 499, doi. 10.1007/s11047-013-9397-2
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- Publication type:
- Article
P-systems and X-machines.
- Published in:
- Natural Computing, 2009, v. 8, n. 4, p. 777, doi. 10.1007/s11047-009-9110-7
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- Publication type:
- Article
Versioning biological cells for trustworthy cell engineering.
- Published in:
- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-28350-4
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- Publication type:
- Article
MODULAR ASSEMBLY OF CELL SYSTEMS BIOLOGY MODELS USING P SYSTEMS.
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- International Journal of Foundations of Computer Science, 2009, v. 20, n. 3, p. 427, doi. 10.1142/S0129054109006668
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- Publication type:
- Article
An open source pipeline for quantitative immunohistochemistry image analysis of inflammatory skin disease using artificial intelligence.
- Published in:
- Journal of the European Academy of Dermatology & Venereology, 2023, v. 37, n. 3, p. 605, doi. 10.1111/jdv.18726
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- Publication type:
- Article
Easybiotics: a GUI for 3D physical modelling of multi-species bacterial populations.
- Published in:
- Bioinformatics, 2019, v. 35, n. 19, p. 3859, doi. 10.1093/bioinformatics/btz131
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- Publication type:
- Article
Automatic selection of verification tools for efficient analysis of biochemical models.
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- Bioinformatics, 2018, v. 34, n. 18, p. 3187, doi. 10.1093/bioinformatics/bty282
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- Publication type:
- Article
RERG (Ras-like, oestrogen-regulated, growth-inhibitor) expression in breast cancer: a marker of ER-positive luminal-like subtype.
- Published in:
- Breast Cancer Research & Treatment, 2011, v. 128, n. 2, p. 315, doi. 10.1007/s10549-010-1073-y
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- Publication type:
- Article
JEPETTO: a Cytoscape plugin for gene set enrichment and topological analysis based on interaction networks.
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- Bioinformatics, 2014, v. 30, n. 7, p. 1029, doi. 10.1093/bioinformatics/btt732
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- Publication type:
- Article
Contact map prediction using a large-scale ensemble of rule sets and the fusion of multiple predicted structural features.
- Published in:
- Bioinformatics, 2012, v. 28, n. 19, p. 2441, doi. 10.1093/bioinformatics/bts472
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- Publication type:
- Article
EnrichNet: network-based gene set enrichment analysis.
- Published in:
- Bioinformatics, 2012, v. 28, n. 18, p. i451, doi. 10.1093/bioinformatics/bts389
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- Publication type:
- Article
The Infobiotics Workbench: an integrated in silico modelling platform for Systems and Synthetic Biology.
- Published in:
- Bioinformatics, 2011, v. 27, n. 23, p. 3323, doi. 10.1093/bioinformatics/btr571
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- Publication type:
- Article
TopoGSA: network topological gene set analysis.
- Published in:
- Bioinformatics, 2010, v. 26, n. 9, p. 1271, doi. 10.1093/bioinformatics/btq131
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- Publication type:
- Article
Prediction of recursive convex hull class assignments for protein residues.
- Published in:
- Bioinformatics, 2008, v. 24, n. 7, p. 916, doi. 10.1093/bioinformatics/btn050
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- Publication type:
- Article
Nature-inspired cooperative strategies for optimization.
- Published in:
- International Journal of Intelligent Systems, 2009, v. 24, n. 7, p. 723, doi. 10.1002/int.20357
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- Publication type:
- Article
Automated self-assembly programming paradigm: The impact of network topology.
- Published in:
- International Journal of Intelligent Systems, 2009, v. 24, n. 7, p. 793
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- Publication type:
- Article
A last-in first-out stack data structure implemented in DNA.
- Published in:
- Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-25023-6
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- Publication type:
- Article
Functional networks inference from rule-based machine learning models.
- Published in:
- BioData Mining, 2016, v. 9, p. 1, doi. 10.1186/s13040-016-0106-4
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- Publication type:
- Article
Extending pathways and processes using molecular interaction networks to analyse cancer genome data.
- Published in:
- BMC Bioinformatics, 2010, v. 11, p. 597, doi. 10.1186/1471-2105-11-597
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- Publication type:
- Article
Automated Alphabet Reduction for Protein Datasets.
- Published in:
- BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-6
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- Publication type:
- Article
ProCKSI: a decision support system for Protein (Structure) Comparison, Knowledge, Similarity and Information.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 416, doi. 10.1186/1471-2105-8-416
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- Publication type:
- Article
Protein interactions within and between two F‐type type IV secretion systems.
- Published in:
- Molecular Microbiology, 2020, v. 114, n. 5, p. 823, doi. 10.1111/mmi.14582
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- Publication type:
- Article
Using Rule-Based Machine Learning for Candidate Disease Gene Prioritization and Sample Classification of Cancer Gene Expression Data.
- Published in:
- PLoS ONE, 2012, v. 7, n. 7, p. 1, doi. 10.1371/journal.pone.0039932
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- Publication type:
- Article
In Situ Analysis Reveals That CFTR Is Expressed in Only a Small Minority of β-Cells in Normal Adult Human Pancreas.
- Published in:
- 2019
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- Publication type:
- journal article
Adaptive Cellular Memetic Algorithms.
- Published in:
- Evolutionary Computation, 2009, v. 17, n. 2, p. 231, doi. 10.1162/evco.2009.17.2.231
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- Publication type:
- Article
Performance and Efficiency of Memetic Pittsburgh Learning Classifier Systems.
- Published in:
- Evolutionary Computation, 2009, v. 17, n. 3, p. 307, doi. 10.1162/evco.2009.17.3.307
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- Publication type:
- Article
An Evolutionary Methodology for the Automated Design of Cellular Automaton-based Complex Systems.
- Published in:
- Journal of Cellular Automata, 2007, v. 2, n. 1, p. 77
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- Publication type:
- Article
Transcriptional responses of Streptococcus gordonii and Fusobacterium nucleatum to coaggregation.
- Published in:
- 2018
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- Publication type:
- journal article
Bacteria clustering by polymers induces the expression of quorum-sensing-controlled phenotypes.
- Published in:
- Nature Chemistry, 2013, v. 5, n. 12, p. 1058, doi. 10.1038/nchem.1793
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- Publication type:
- Article
Predicting species emergence in simulated complex pre-biotic networks.
- Published in:
- PLoS ONE, 2018, v. 13, n. 2, p. 1, doi. 10.1371/journal.pone.0192871
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- Publication type:
- Article
The imitation game—a computational chemical approach to recognizing life.
- Published in:
- 2006
- By:
- Publication type:
- Editorial
Stochastic and deterministic multiscale models for systems biology: an auxin-transport case study.
- Published in:
- 2010
- By:
- Publication type:
- Case Study
CSBB: synthetic biology research at Newcastle University.
- Published in:
- Biochemical Society Transactions, 2017, v. 45, n. 3, p. 781, doi. 10.1042/BST20160437
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- Publication type:
- Article
A thermodynamic switch modulates abscisic acid receptor sensitivity.
- Published in:
- EMBO Journal, 2022, v. 41, n. 7, p. 1, doi. 10.15252/embj.2022110799
- By:
- Publication type:
- Article
Light-Up Split Broccoli Aptamer as a Versatile Tool for RNA Assembly Monitoring in Cell-Free TX-TL Systems, Hybrid RNA/DNA Origami Tagging and DNA Biosensing.
- Published in:
- International Journal of Molecular Sciences, 2023, v. 24, n. 10, p. 8483, doi. 10.3390/ijms24108483
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- Publication type:
- Article