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- Title
MatrixDB, a database focused on extracellular protein-protein and protein-carbohydrate interactions.
- Authors
Emilie Chautard; Lionel Ballut; Nicolas Thierry-Mieg; Sylvie Ricard-Blum
- Abstract
Summary: MatrixDB (http://matrixdb.ibcp.fr) is a database reporting mammalian proteinâprotein and proteinâcarbohydrate interactions involving extracellular molecules. It takes into account the full interaction repertoire of the extracellular matrix involving full-length molecules, fragments and multimers. The current version of MatrixDB contains 1972 interactions corresponding to 4412 experiments and involving 259 extracellular biomolecules. Availability: MatrixDB is freely available at http://matrixdb.ibcp.fr Contact: nicolas.thierry-mieg@imag.fr; s.ricard-blum@ibcp.fr Supplementary information: Supplementary data are available at Bioinformatics online.
- Subjects
PROTEIN-protein interactions; DATABASES; CARBOHYDRATES; BIOMOLECULES; EXTRACELLULAR matrix; BIOINFORMATICS
- Publication
Bioinformatics, 2009, Vol 25, Issue 5, p690
- ISSN
1367-4803
- Publication type
Article
- DOI
10.1093/bioinformatics/btp025