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Opposite base-dependent reactions of a human base excision repair enzyme on DNA containing 7,8-dihydro-8-oxoguanine and abasic sites.
- Published in:
- EMBO Journal, 1997, v. 16, n. 20, p. 6314, doi. 10.1093/emboj/16.20.6314
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- Publication type:
- Article
NucDiff: in-depth characterization and annotation of differences between two sets of DNA sequences.
- Published in:
- BMC Bioinformatics, 2017, v. 18, p. 1, doi. 10.1186/s12859-017-1748-z
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- Publication type:
- Article
Alkbh1 and Tzfp repress a non-repeat piRNA cluster in pachytene spermatocytes.
- Published in:
- Nucleic Acids Research, 2012, v. 40, n. 21, p. 10950, doi. 10.1093/nar/gks839
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- Publication type:
- Article
The disruptive positions in human G-quadruplex motifs are less polymorphic and more conserved than their neutral counterparts.
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- Nucleic Acids Research, 2009, v. 37, n. 17, p. 5749, doi. 10.1093/nar/gkp590
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- Publication type:
- Article
RNAmmer: consistent and rapid annotation of ribosomal RNA genes.
- Published in:
- Nucleic Acids Research, 2007, v. 35, n. 9, p. 3100, doi. 10.1093/nar/gkm160
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- Publication type:
- Article
Structural insight into repair of alkylated DNA by a new superfamily of DNA glycosylases comprising HEAT-like repeats.
- Published in:
- Nucleic Acids Research, 2007, v. 35, n. 7, p. 2451, doi. 10.1093/nar/gkm039
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- Publication type:
- Article
hGSuite HyperBrowser: A web-based toolkit for hierarchical metadata-informed analysis of genomic tracks.
- Published in:
- PLoS ONE, 2023, v. 18, n. 7, p. 1, doi. 10.1371/journal.pone.0286330
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- Publication type:
- Article
ALKBH1 is a Histone H2A Dioxygenase Involved in Neural Differentiation.
- Published in:
- Stem Cells, 2012, v. 30, n. 12, p. 2672, doi. 10.1002/stem.1228
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- Publication type:
- Article
CompAIRR: ultra-fast comparison of adaptive immune receptor repertoires by exact and approximate sequence matching.
- Published in:
- Bioinformatics, 2022, v. 38, n. 17, p. 4230, doi. 10.1093/bioinformatics/btac505
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- Publication type:
- Article
Swarm v3: towards tera-scale amplicon clustering.
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- Bioinformatics, 2022, v. 38, n. 1, p. 267, doi. 10.1093/bioinformatics/btab493
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- Publication type:
- Article
Transcriptome analysis of human OXR1 depleted cells reveals its role in regulating the p53 signaling pathway.
- Published in:
- Scientific Reports, 2015, v. 5, n. 1, p. 17409, doi. 10.1038/srep17409
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- Publication type:
- Article
A new protein superfamily includes two novel 3-methyladenine DNA glycosylases from Bacillus cereus, AlkC and AlkD.
- Published in:
- Molecular Microbiology, 2006, v. 59, n. 5, p. 1602, doi. 10.1111/j.1365-2958.2006.05044.x
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- Publication type:
- Article
Exploring the gut DNA virome in fecal immunochemical test stool samples reveals associations with lifestyle in a large population-based study.
- Published in:
- Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-46033-0
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- Publication type:
- Article
Non-homologous functions of the AlkB homologs.
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- Journal of Molecular Cell Biology, 2015, v. 7, n. 6, p. 494, doi. 10.1093/jmcb/mjv029
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- Publication type:
- Article
Normalization of RNA-Sequencing Data from Samples with Varying mRNA Levels.
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- PLoS ONE, 2014, v. 9, n. 2, p. 1, doi. 10.1371/journal.pone.0089158
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- Publication type:
- Article
Evolutionary Paths of the cAMP-Dependent Protein Kinase (PKA) Catalytic Subunits.
- Published in:
- PLoS ONE, 2013, v. 8, n. 4, p. 1, doi. 10.1371/journal.pone.0060935
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- Publication type:
- Article
Identification and Characterization of Novel Mutations in the Human Gene Encoding the Catalytic Subunit Calpha of Protein Kinase A (PKA).
- Published in:
- PLoS ONE, 2012, v. 7, n. 4, p. 1, doi. 10.1371/journal.pone.0034838
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- Publication type:
- Article
Tiling Array Analysis of UV Treated Escherichia coli Predicts Novel Differentially Expressed Small Peptides.
- Published in:
- PLoS ONE, 2010, v. 5, n. 12, p. 1, doi. 10.1371/journal.pone.0015356
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- Publication type:
- Article
Mice Lacking Alkbh 1 Display Sex-Ratio Distortion and Unilateral Eye Defects.
- Published in:
- PLoS ONE, 2010, v. 5, n. 11, p. 1, doi. 10.1371/journal.pone.0013827
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- Publication type:
- Article
Custom Design and Analysis of High-Density Oligonucleotide Bacterial Tiling Microarrays.
- Published in:
- PLoS ONE, 2009, v. 4, n. 6, p. 1, doi. 10.1371/journal.pone.0005943
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- Publication type:
- Article
The Mycobacterium tuberculosis transcriptional landscape under genotoxic stress.
- Published in:
- BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-3132-1
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- Publication type:
- Article
cnvScan: a CNV screening and annotation tool to improve the clinical utility of computational CNV prediction from exome sequencing data.
- Published in:
- BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-2374-2
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- Publication type:
- Article
HoCoRT: host contamination removal tool.
- Published in:
- BMC Bioinformatics, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s12859-023-05492-w
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- Publication type:
- Article
Faster Smith-Waterman database searches with inter-sequence SIMD parallelisation.
- Published in:
- BMC Bioinformatics, 2011, v. 12, n. 1, p. 221, doi. 10.1186/1471-2105-12-221
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- Publication type:
- Article
PARALIGN: rapid and sensitive sequence similarity searches powered by parallel computing technology.
- Published in:
- Nucleic Acids Research, 2005, v. 33, n. suppl 2, p. w535, doi. 10.1093/nar/gki423
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- Publication type:
- Article
Predicting non-coding RNA genes in Escherichia coli with boosted genetic programming.
- Published in:
- Nucleic Acids Research, 2005, v. 33, n. 10, p. 3263, doi. 10.1093/nar/gki644
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- Publication type:
- Article
Biased distribution of DNA uptake sequences towards genome maintenance genes.
- Published in:
- Nucleic Acids Research, 2004, v. 32, n. 3, p. 1050, doi. 10.1093/nar/gkh255
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- Publication type:
- Article
Incision at hypoxanthine residues in DNA by a mammalian homologue of the Escherichia coli antimutator enzyme endonuclease V.
- Published in:
- Nucleic Acids Research, 2003, v. 31, n. 14, p. 3893, doi. 10.1093/nar/gkg472
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- Publication type:
- Article
Human DNA glycosylases of the bacterial Fpg/MutM superfamily: an alternative pathway for the repair of 8‐oxoguanine and other oxidation products in DNA.
- Published in:
- Nucleic Acids Research, 2002, v. 30, n. 22, p. 4926, doi. 10.1093/nar/gkf618
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- Publication type:
- Article
ParAlign: a parallel sequence alignment algorithm for rapid and sensitive database searches.
- Published in:
- Nucleic Acids Research, 2001, v. 29, n. 7, p. 1647, doi. 10.1093/nar/29.7.1647
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- Publication type:
- Article
The CRCbiome study: a large prospective cohort study examining the role of lifestyle and the gut microbiome in colorectal cancer screening participants.
- Published in:
- 2021
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- Publication type:
- journal article
NucBreak: location of structural errors in a genome assembly by using paired-end Illumina reads.
- Published in:
- BMC Bioinformatics, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s12859-020-3414-0
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- Publication type:
- Article
MoDLE: high-performance stochastic modeling of DNA loop extrusion interactions.
- Published in:
- Genome Biology, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s13059-022-02815-7
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- Publication type:
- Article
Altered Genome-Wide DNA Methylation in the Duodenum of Common Variable Immunodeficiency Patients.
- Published in:
- Journal of Clinical Immunology, 2024, v. 44, n. 6, p. 1, doi. 10.1007/s10875-024-01726-5
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- Publication type:
- Article
Continuous and Periodic Expansion of CAG Repeats in Huntington's Disease R6/1 Mice.
- Published in:
- PLoS Pathogens, 2011, v. 7, n. 2, p. 1, doi. 10.1371/journal.pgen.1001242
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- Publication type:
- Article
Six-fold speed-up of Smith--Waterman sequence database searches using parallel processing on common microprocessors.
- Published in:
- Bioinformatics, 2000, v. 16, n. 8, p. 699, doi. 10.1093/bioinformatics/16.8.699
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- Publication type:
- Article
SALSA: improved protein database searching by a new algorithm for assembly of sequence fragments into gapped alignments.
- Published in:
- Bioinformatics, 1998, v. 14, n. 10, p. 839, doi. 10.1093/bioinformatics/14.10.839
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- Publication type:
- Article
Tiling array study of MNNG treated Escherichia coli reveals a widespread transcriptional response.
- Published in:
- Scientific Reports, 2013, p. 1, doi. 10.1038/srep03053
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- Publication type:
- Article
Exploring the role of the multiple sclerosis susceptibility gene CLEC16A in T cells.
- Published in:
- Scandinavian Journal of Immunology, 2021, v. 94, n. 1, p. 1, doi. 10.1111/sji.13050
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- Publication type:
- Article
Single Transmembrane Peptide DinQ Modulates Membrane-Dependent Activities.
- Published in:
- PLoS Genetics, 2013, v. 9, n. 2, p. 1, doi. 10.1371/journal.pgen.1003260
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- Publication type:
- Article
Continuous and Periodic Expansion of CAG Repeats in Huntington's Disease R6/1 Mice.
- Published in:
- PLoS Genetics, 2010, v. 6, n. 12, p. 1, doi. 10.1371/journal.pgen.1001242
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- Publication type:
- Article
Reduced metagenome sequencing for strain-resolution taxonomic profiles.
- Published in:
- Microbiome, 2021, v. 9, n. 1, p. 1, doi. 10.1186/s40168-021-01019-8
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- Publication type:
- Article
Computational Prediction of MicroRNAs Encoded in Viral and Other Genomes.
- Published in:
- Journal of Biomedicine & Biotechnology, 2006, p. 1, doi. 10.1155/JBB/2006/95270
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- Publication type:
- Article