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Generation of Pulmonary Endothelial Progenitor Cells for Cell-based Therapy Using Interspecies Mouse-Rat Chimeras.
Published in:
2021
By:
- Guolun Wang;
- Bingqiang Wen;
- Xiaomeng Ren;
- Enhong Li;
- Yufang Zhang;
- Minzhe Guo;
- Yan Xu;
- Whitsett, Jeffrey A.;
- Kalin, Tanya V.;
- Kalinichenko, Vladimir V.;
- Wang, Guolun;
- Wen, Bingqiang;
- Ren, Xiaomeng;
- Li, Enhong;
- Zhang, Yufang;
- Guo, Minzhe;
- Xu, Yan
Publication type:
journal article
Generation of Lung and Thyroid Tissues from Embryonic Stem Cells Using Blastocyst Complementation.
Published in:
2021
By:
- Bingqiang Wen;
- Enhong Li;
- Ustiyan, Vladimir;
- Guolun Wang;
- Minzhe Guo;
- Cheng-Lun Na;
- Kalin, Gregory T.;
- Galvan, Veronica;
- Yan Xu;
- Weaver, Timothy E.;
- Kalin, Tanya V.;
- Whitsett, Jeffrey A.;
- Kalinichenko, Vladimir V.;
- Wen, Bingqiang;
- Li, Enhong;
- Wang, Guolun;
- Guo, Minzhe;
- Na, Cheng-Lun;
- Xu, Yan
Publication type:
journal article
Postnatal Alveologenesis Depends on FOXF1 Signaling in c-KIT<sup>+</sup> Endothelial Progenitor Cells.
Published in:
2019
By:
- Xiaomeng Ren;
- Ustiyan, Vladimir;
- Minzhe Guo;
- Guolun Wang;
- Bolte, Craig;
- Yufang Zhang;
- Yan Xu;
- Whitsett, Jeffrey A.;
- Kalin, Tanya V.;
- Kalinichenko, Vladimir V.;
- Ren, Xiaomeng;
- Guo, Minzhe;
- Wang, Guolun;
- Zhang, Yufang;
- Xu, Yan
Publication type:
journal article
Gene signature driving invasive mucinous adenocarcinoma of the lung.
Published in:
EMBO Molecular Medicine, 2017, v. 9, n. 4, p. 462, doi. 10.15252/emmm.201606711
By:
- Guo, Minzhe;
- Tomoshige, Koichi;
- Meister, Michael;
- Muley, Thomas;
- Fukazawa, Takuya;
- Tsuchiya, Tomoshi;
- Karns, Rebekah;
- Warth, Arne;
- Fink‐Baldauf, Iris M;
- Nagayasu, Takeshi;
- Naomoto, Yoshio;
- Xu, Yan;
- Mall, Marcus A;
- Maeda, Yutaka
Publication type:
Article
CRISPRi-mediated functional analysis of NKX2-1-binding sites in the lung.
Published in:
Communications Biology, 2021, v. 4, n. 1, p. 1, doi. 10.1038/s42003-021-02083-4
By:
- Stuart, William D.;
- Fink-Baldauf, Iris M.;
- Tomoshige, Koichi;
- Guo, Minzhe;
- Maeda, Yutaka
Publication type:
Article
Single-cell multiomic profiling of human lungs reveals cell-type-specific and age-dynamic control of SARS-CoV2 host genes.
Published in:
eLife, 2020, p. 1, doi. 10.7554/eLife.62522
By:
- Wang, Allen;
- Chiou, Joshua;
- Poirion, Olivier B.;
- Buchanan, Justin;
- Valdez, Michael J.;
- Verheyden, Jamie M.;
- Xiaomeng Hou;
- Kudtarkar, Parul;
- Narendra, Sharvari;
- Newsome, Jacklyn M.;
- Guo, Minzhe;
- Faddah, Dina A.;
- Kai Zhang;
- Young, Randee E.;
- Barr, Justinn;
- Sajti, Eniko;
- Misra, Ravi;
- Huyck, Heidie;
- Rogers, Lisa;
- Poole, Cory
Publication type:
Article
An Incentive Compatible Mechanism for Replica Placement in Peer-Assisted Content Distribution.
Published in:
International Journal of Software Science & Computational Intelligence, 2020, v. 12, n. 1, p. N.PAG, doi. 10.4018/IJSSCI.2020010104
By:
- Bhattacharya, Prabir;
- Guo, Minzhe
Publication type:
Article
SLICE: determining cell differentiation and lineage based on single cell entropy.
Published in:
Nucleic Acids Research, 2017, v. 45, n. 7, p. 1, doi. 10.1093/nar/gkw1278
By:
- Minzhe Guo;
- Erik L. Bao;
- Wagner, Michael;
- Whitsett, Jeffrey A.;
- Yan Xu
Publication type:
Article
SOX2 suppresses CDKN1A to sustain growth of lung squamous cell carcinoma.
Published in:
Scientific Reports, 2016, p. 20113, doi. 10.1038/srep20113
By:
- Fukazawa, Takuya;
- Guo, Minzhe;
- Ishida, Naomasa;
- Yamatsuji, Tomoki;
- Takaoka, Munenori;
- Yokota, Etsuko;
- Haisa, Minoru;
- Miyake, Noriko;
- Ikeda, Tomoko;
- Okui, Tatsuo;
- Takigawa, Nagio;
- Maeda, Yutaka;
- Naomoto, Yoshio
Publication type:
Article
Guided construction of single cell reference for human and mouse lung.
Published in:
Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-40173-5
By:
- Guo, Minzhe;
- Morley, Michael P.;
- Jiang, Cheng;
- Wu, Yixin;
- Li, Guangyuan;
- Du, Yina;
- Zhao, Shuyang;
- Wagner, Andrew;
- Cakar, Adnan Cihan;
- Kouril, Michal;
- Jin, Kang;
- Gaddis, Nathan;
- Kitzmiller, Joseph A.;
- Stewart, Kathleen;
- Basil, Maria C.;
- Lin, Susan M.;
- Ying, Yun;
- Babu, Apoorva;
- Wikenheiser-Brokamp, Kathryn A.;
- Mun, Kyu Shik
Publication type:
Article
Single Cell Multiomics Identifies Cells and Genetic Networks Underlying Alveolar Capillary Dysplasia.
Published in:
American Journal of Respiratory & Critical Care Medicine, 2023, v. 208, n. 6, p. 709, doi. 10.1164/rccm.202210-2015OC
By:
- Minzhe Guo;
- Wikenheiser-Brokamp, Kathryn A.;
- Kitzmiller, Joseph A.;
- Cheng Jiang;
- Guolun Wang;
- Wang, Allen;
- Preissl, Sebastian;
- Xiaomeng Hou;
- Buchanan, Justin;
- Karolak, Justyna A.;
- Yifei Miao;
- Frank, David B.;
- Zacharias, William J.;
- Xin Sun;
- Yan Xu;
- Mingxia Gu;
- Stankiewicz, Pawel;
- Kalinichenko, Vladimir V.;
- Wambach, Jennifer A.;
- Whitsett, Jeffrey A.
Publication type:
Article
Single cell multiomics identifies cells and genetic networks underlying alveolar capillary dysplasia.
Published in:
American Journal of Respiratory & Critical Care Medicine, 2023, v. 208, n. 6, p. E1, doi. 10.1164/rccm.202210-2015oc
By:
- Minzhe Guo;
- Wikenheiser-Brokamp, Kathryn A.;
- Kitzmiller, Joseph A.;
- Cheng Jiang;
- Guolun Wang;
- Wang, Allen;
- Preissl, Sebastian;
- Xiaomeng Hou;
- Buchanan, Justin;
- Karolak, Justyna A.;
- Yifei Miao;
- Frank, David B.;
- Zacharias, William J.;
- Xin Sun;
- Yan Xu;
- Mingxia Gu;
- Stankiewicz, Pawel;
- Kalinichenko, Vladimir V.;
- Wambach, Jennifer A.;
- Whitsett, Jeffrey A.
Publication type:
Article
Single-Cell Transcriptomic Analysis Identifies a Unique Pulmonary Lymphangioleiomyomatosis Cell.
Published in:
2020
By:
- Guo, Minzhe;
- Yu, Jane J.;
- Perl, Anne Karina;
- Wikenheiser-Brokamp, Kathryn A.;
- Riccetti, Matt;
- Zhang, Erik Y.;
- Sudha, Parvathi;
- Adam, Mike;
- Potter, Andrew;
- Kopras, Elizabeth J.;
- Giannikou, Krinio;
- Potter, S. Steven;
- Sherman, Sue;
- Hammes, Stephen R.;
- Kwiatkowski, David J.;
- Whitsett, Jeffrey A.;
- McCormack, Francis X.;
- Yan Xu;
- Xu, Yan
Publication type:
journal article
Postnatal Alveologenesis Depends on FOXF1 Signaling in c-KIT+ Endothelial Progenitor Cells.
Published in:
American Journal of Respiratory & Critical Care Medicine, 2019, v. 200, n. 9, p. E1, doi. 10.1164/rccm.201812-2312oc
By:
- Xiaomeng Ren;
- Ustiyan, Vladimir;
- Minzhe Guo;
- Guolun Wang;
- Bolte, Craig;
- Yufang Zhang;
- Yan Xu;
- Whitsett, Jeffrey A.;
- Kalin, Tanya V.;
- Kalinichenko, Vladimir V.
Publication type:
Article
PI3K signaling specifies proximal-distal fate by driving a developmental gene regulatory network in SOX9+ mouse lung progenitors.
Published in:
eLife, 2022, p. 1, doi. 10.7554/eLife.67954
By:
- Khattar, Divya;
- Fernandes, Sharlene;
- Snowball, John;
- Minzhe Guo;
- Gillen, Matthew C.;
- Jain, Suchi Singh;
- Sinner, Debora;
- Zacharias, William;
- Swarr, Daniel T.
Publication type:
Article
Single cell RNA analysis identifies cellular heterogeneity and adaptive responses of the lung at birth.
Published in:
Nature Communications, 2019, v. 10, n. 1, p. 1, doi. 10.1038/s41467-018-07770-1
By:
- Guo, Minzhe;
- Du, Yina;
- Gokey, Jason J.;
- Ray, Samriddha;
- Bell, Sheila M.;
- Adam, Mike;
- Sudha, Parvathi;
- Perl, Anne Karina;
- Deshmukh, Hitesh;
- Potter, S. Steven;
- Whitsett, Jeffrey A.;
- Xu, Yan
Publication type:
Article
LungMAP Portal Ecosystem: Systems-level Exploration of the Lung.
Published in:
American Journal of Respiratory Cell & Molecular Biology, 2024, v. 70, n. 2, p. 129, doi. 10.1165/rcmb.2022-0165OC
By:
- Gaddis, Nathan;
- Fortriede, Joshua;
- Minzhe Guo;
- Bardes, Eric E.;
- Kouril, Michal;
- Tabar, Scott;
- Burns, Kevin;
- Ardini-Poleske, Maryanne E.;
- Loos, Stephanie;
- Schnell, Daniel;
- Kang Jin;
- Iyer, Balaji;
- Yina Du;
- Bing-Xing Huo;
- Bhattacharjee, Anukana;
- Korte, Jeff;
- Munshi, Ruchi;
- Smith, Victoria;
- Herbst, Andrew;
- Kitzmiller, Joseph A.
Publication type:
Article
Lung Gene Expression Analysis Web Portal Version 3: Lung-at-a-Glance.
Published in:
American Journal of Respiratory Cell & Molecular Biology, 2021, v. 64, n. 1, p. 146, doi. 10.1165/rcmb.2020-0308le
By:
- Yina Du;
- Weichen Ouyang;
- Kitzmiller, Joseph A.;
- Minzhe Guo;
- Shuyang Zhao;
- Whitsett, Jeffrey A.;
- Yan Xu
Publication type:
Article
SINCERA: A Pipeline for Single-Cell RNA-Seq Profiling Analysis.
Published in:
PLoS Computational Biology, 2015, v. 11, n. 11, p. 1, doi. 10.1371/journal.pcbi.1004575
By:
- Guo, Minzhe;
- Wang, Hui;
- Potter, S. Steven;
- Whitsett, Jeffrey A.;
- Xu, Yan
Publication type:
Article
Measuring and ranking attacks based on vulnerability analysis.
Published in:
Information Systems & e-Business Management, 2012, v. 10, n. 4, p. 455, doi. 10.1007/s10257-011-0173-5
By:
- Wang, Ju;
- Guo, Minzhe;
- Wang, Hao;
- Zhou, Linfeng
Publication type:
Article
Clinical application of a lung cancer organoid (tumoroid) culture system.
Published in:
NPJ Precision Oncology, 2021, v. 5, n. 1, p. 1, doi. 10.1038/s41698-021-00166-3
By:
- Yokota, Etsuko;
- Iwai, Miki;
- Yukawa, Takuro;
- Yoshida, Masakazu;
- Naomoto, Yoshio;
- Haisa, Minoru;
- Monobe, Yasumasa;
- Takigawa, Nagio;
- Guo, Minzhe;
- Maeda, Yutaka;
- Fukazawa, Takuya;
- Yamatsuji, Tomoki
Publication type:
Article
PRDM3/16 regulate chromatin accessibility required for NKX2-1 mediated alveolar epithelial differentiation and function.
Published in:
Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-52154-3
By:
- He, Hua;
- Bell, Sheila M.;
- Davis, Ashley Kuenzi;
- Zhao, Shuyang;
- Sridharan, Anusha;
- Na, Cheng-Lun;
- Guo, Minzhe;
- Xu, Yan;
- Snowball, John;
- Swarr, Daniel T.;
- Zacharias, William J.;
- Whitsett, Jeffrey A.
Publication type:
Article
PRDM3/16 regulate chromatin accessibility required for NKX2-1 mediated alveolar epithelial differentiation and function.
Published in:
Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-52154-3
By:
- He, Hua;
- Bell, Sheila M.;
- Davis, Ashley Kuenzi;
- Zhao, Shuyang;
- Sridharan, Anusha;
- Na, Cheng-Lun;
- Guo, Minzhe;
- Xu, Yan;
- Snowball, John;
- Swarr, Daniel T.;
- Zacharias, William J.;
- Whitsett, Jeffrey A.
Publication type:
Article
Identification of endothelial and mesenchymal FOXF1 enhancers involved in alveolar capillary dysplasia.
Published in:
Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-49477-6
By:
- Wang, Guolun;
- Wen, Bingqiang;
- Guo, Minzhe;
- Li, Enhong;
- Zhang, Yufang;
- Whitsett, Jeffrey A.;
- Kalin, Tanya V.;
- Kalinichenko, Vladimir V.
Publication type:
Article
The balance between protective and pathogenic immune responses to pneumonia in the neonatal lung is enforced by gut microbiota.
Published in:
Science Translational Medicine, 2022, v. 14, n. 649, p. 1, doi. 10.1126/scitranslmed.abl3981
By:
- Stevens, Joseph;
- Steinmeyer, Shelby;
- Bonfield, Madeline;
- Peterson, Laura;
- Wang, Timothy;
- Gray, Jerilyn;
- Lewkowich, Ian;
- Xu, Yan;
- Du, Yina;
- Guo, Minzhe;
- Wynn, James L.;
- Zacharias, William;
- Salomonis, Nathan;
- Miller, Lisa;
- Chougnet, Claire;
- O'Connor, Dennis Hartigan;
- Deshmukh, Hitesh
Publication type:
Article
Inflammatory blockade prevents injury to the developing pulmonary gas exchange surface in preterm primates.
Published in:
Science Translational Medicine, 2022, v. 14, n. 638, p. 1, doi. 10.1126/scitranslmed.abl8574
By:
- Toth, Andrea;
- Steinmeyer, Shelby;
- Kannan, Paranthaman;
- Gray, Jerilyn;
- Jackson, Courtney M.;
- Mukherjee, Shibabrata;
- Demmert, Martin;
- Sheak, Joshua R.;
- Benson, Daniel;
- Kitzmiller, Joseph;
- Wayman, Joseph A.;
- Presicce, Pietro;
- Cates, Christopher;
- Rubin, Rhea;
- Chetal, Kashish;
- Du, Yina;
- Miao, Yifei;
- Gu, Mingxia;
- Guo, Minzhe;
- Kalinichenko, Vladimir V.
Publication type:
Article
iPSC–endothelial cell phenotypic drug screening and in silico analyses identify tyrphostin-AG1296 for pulmonary arterial hypertension.
Published in:
Science Translational Medicine, 2021, v. 13, n. 592, p. 1, doi. 10.1126/scitranslmed.aba6480
By:
- Gu, Mingxia;
- Donato, Michele;
- Guo, Minzhe;
- Wary, Neil;
- Miao, Yifei;
- Mao, Shuai;
- Saito, Toshie;
- Otsuki, Shoichiro;
- Wang, Lingli;
- Harper, Rebecca L.;
- Sa, Silin;
- Khatri, Purvesh;
- Rabinovitch, Marlene
Publication type:
Article
Single-Cell Transcriptomic Profiling Identifies Molecular Phenotypes of Newborn Human Lung Cells.
Published in:
Genes, 2024, v. 15, n. 3, p. 298, doi. 10.3390/genes15030298
By:
- Bhattacharya, Soumyaroop;
- Myers, Jacquelyn A.;
- Baker, Cameron;
- Guo, Minzhe;
- Danopoulos, Soula;
- Myers, Jason R.;
- Bandyopadhyay, Gautam;
- Romas, Stephen T.;
- Huyck, Heidie L.;
- Misra, Ravi S.;
- Dutra, Jennifer;
- Holden-Wiltse, Jeanne;
- McDavid, Andrew N.;
- Ashton, John M.;
- Al Alam, Denise;
- Potter, S. Steven;
- Whitsett, Jeffrey A.;
- Xu, Yan;
- Pryhuber, Gloria S.;
- Mariani, Thomas J.
Publication type:
Article

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