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- Title
FlexTaxD: flexible modification of taxonomy databases for improved sequence classification.
- Authors
Sundell, David; Öhrman, Caroline; Svensson, Daniel; Karlsson, Edvin; Brindefalk, Björn; Myrtennäs, Kerstin; Ahlinder, Jon; Antwerpen, Markus H; Walter, Mathias C; Forsman, Mats; Stenberg, Per; Sjödin, Andreas
- Abstract
Summary The Flexible Taxonomy Database framework provides a method for modification and merging official and custom taxonomic databases to create improved databases. Using such databases will increase accuracy and precision of existing methods to classify sequence reads. Availability and implementation Source code is freely available at https://github.com/FOI-Bioinformatics/flextaxd and installable through Bioconda.
- Subjects
DATABASES; TAXONOMY; CLASSIFICATION
- Publication
Bioinformatics, 2021, Vol 37, Issue 21, p3932
- ISSN
1367-4803
- Publication type
Article
- DOI
10.1093/bioinformatics/btab621