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Complexities in understanding antimicrobial resistance across domesticated animal, human, and environmental systems.
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- Annals of the New York Academy of Sciences, 2019, v. 1441, n. 1, p. 17, doi. 10.1111/nyas.14036
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- Article
Allelic Variation in Outer Membrane Protein A and Its Influence on Attachment of Escherichia coli to Corn Stover.
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- Frontiers in Microbiology, 2017, v. 8, p. 1, doi. 10.3389/fmicb.2017.00708
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Contrasting geochemical and fungal controls on decomposition of lignin and soil carbon at continental scale.
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- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-37862-6
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- Article
Seasonal activities of the phyllosphere microbiome of perennial crops.
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- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-36515-y
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Diversity of Antibiotic Resistance genes and Transfer Elements-Quantitative Monitoring (DARTE-QM): a method for detection of antimicrobial resistance in environmental samples.
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- Communications Biology, 2022, v. 5, n. 1, p. 1, doi. 10.1038/s42003-022-03155-9
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- Article
Soil net nitrogen mineralization and leaching under Miscanthus × giganteus and Zea mays.
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- GCB Bioenergy, 2021, v. 13, n. 9, p. 1545, doi. 10.1111/gcbb.12875
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These Are Not the K-mers You Are Looking For: Efficient Online K-mer Counting Using a Probabilistic Data Structure.
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- PLoS ONE, 2014, v. 9, n. 7, p. 1, doi. 10.1371/journal.pone.0101271
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Microbial assemblages and methanogenesis pathways impact methane production and foaming in manure deep-pit storages.
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- PLoS ONE, 2021, v. 16, n. 8, p. 1, doi. 10.1371/journal.pone.0254730
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- Article
Impact of Swine and Cattle Manure Treatment on the Microbial Composition and Resistome of Soil and Drainage Water.
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- Microorganisms, 2023, v. 11, n. 1, p. 17, doi. 10.3390/microorganisms11010017
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- Article
Resolving the influence of lignin on soil organic matter decomposition with mechanistic models and continental‐scale data.
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- Global Change Biology, 2023, v. 29, n. 20, p. 5968, doi. 10.1111/gcb.16875
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Catchment-scale export of antibiotic resistance genes and bacteria from an agricultural watershed in central Iowa.
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- PLoS ONE, 2020, v. 15, n. 1, p. 1, doi. 10.1371/journal.pone.0227136
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- Article
Investigating the dispersal of antibiotic resistance associated genes from manure application to soil and drainage waters in simulated agricultural farmland systems.
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- PLoS ONE, 2019, v. 14, n. 9, p. 1, doi. 10.1371/journal.pone.0222470
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- Article
Characterizing the soil microbiome and quantifying antibiotic resistance gene dynamics in agricultural soil following swine CAFO manure application.
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- PLoS ONE, 2019, v. 14, n. 8, p. 1, doi. 10.1371/journal.pone.0220770
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- Article
Microbiome differences in sugarcane and metabolically engineered oilcane accessions and their implications for bioenergy production.
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- Biotechnology for Biofuels & Bioproducts, 2023, v. 16, n. 1, p. 1, doi. 10.1186/s13068-023-02302-6
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- Article
Impact of flow on woodchip properties and subsidence in denitrifying bioreactors.
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- Agrosystems, Geosciences & Environment, 2021, v. 4, n. 1, p. 1, doi. 10.1002/agg2.20149
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- Article
Microbial activity in forest soil reflects the changes in ecosystem properties between summer and winter.
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- Environmental Microbiology, 2016, v. 18, n. 1, p. 288, doi. 10.1111/1462-2920.13026
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The genome and developmental transcriptome of the strongylid nematode Haemonchus contortus.
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- Genome Biology, 2013, v. 14, n. 8, p. R89, doi. 10.1186/gb-2013-14-8-r89
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- Article
Chemical attributes, bacterial community, and antibiotic resistance genes are affected by intensive use of soil in agro-ecosystems of the Atlantic Forest, Southeastern Brazil.
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- Environmental Geochemistry & Health, 2024, v. 46, n. 4, p. 1, doi. 10.1007/s10653-024-01894-8
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- Article
Prairie strips' effect on transport of antimicrobial resistance indicators in poultry litter.
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- Journal of Environmental Quality, 2022, v. 51, n. 2, p. 260, doi. 10.1002/jeq2.20333
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Comparison of microbial communities in replicated woodchip bioreactors.
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- Journal of Environmental Quality, 2022, v. 51, n. 2, p. 205, doi. 10.1002/jeq2.20320
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Denitrifying bioreactor microbiome: Understanding pollution swapping and potential for improved performance.
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- Journal of Environmental Quality, 2022, v. 51, n. 1, p. 1, doi. 10.1002/jeq2.20302
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- Article
Antimicrobial resistance in integrated agroecosystems: State of the science and future opportunities.
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- Journal of Environmental Quality, 2021, v. 50, n. 6, p. 1255, doi. 10.1002/jeq2.20289
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Antibiotic resistance gene dissipation in soil microcosms amended with antibiotics and swine manure.
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- Journal of Environmental Quality, 2021, v. 50, n. 4, p. 911, doi. 10.1002/jeq2.20240
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- Article
Identification of the Core Set of Carbon-Associated Genes in a Bioenergy Grassland Soil.
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- PLoS ONE, 2016, v. 11, n. 11, p. 1, doi. 10.1371/journal.pone.0166578
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- Article
Identification of Soil Microbes Capable of Utilizing Cellobiosan.
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- PLoS ONE, 2016, v. 11, n. 2, p. 1, doi. 10.1371/journal.pone.0149336
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- Article
Changes on the intestinal bacterial community of white shrimp Penaeus vannamei fed with green seaweeds.
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- Journal of Applied Phycology, 2020, v. 32, n. 3, p. 2061, doi. 10.1007/s10811-020-02072-w
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Feed in summer, rest in winter: microbial carbon utilization in forest topsoil.
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- Microbiome, 2017, v. 5, p. 1, doi. 10.1186/s40168-017-0340-0
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Land-Use System and Forest Floor Explain Prokaryotic Metacommunity Structuring and Spatial Turnover in Amazonian Forest-to-Pasture Conversion Areas.
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- Frontiers in Microbiology, 2021, v. 11, p. N.PAG, doi. 10.3389/fmicb.2021.657508
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- Article
Comparison of antibiotic resistance genes in swine manure storage pits of Iowa, USA.
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- Frontiers in Antibiotics, 2023, v. 2, p. 1, doi. 10.3389/frabi.2023.1116785
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Anthropogenic N Deposition Slows Decay by Favoring Bacterial Metabolism: Insights from Metagenomic Analyses.
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- Frontiers in Microbiology, 2016, p. 1, doi. 10.3389/fmicb.2016.00259
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Demonstrating Microbial Co-occurrence Pattern Analyses Within and Between Ecosystems.
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- Frontiers in Microbiology, 2014, v. 5, p. 1, doi. 10.3389/fmicb.2014.00358
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- Article