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Boosting the predictive performance with aqueous solubility dataset curation.
- Published in:
- Scientific Data, 2022, v. 9, n. 1, p. 1, doi. 10.1038/s41597-022-01154-3
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- Article
Editorial: Computational Learning Models and Methods Driven by Omics for Precision Medicine.
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- 2020
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- Publication type:
- Editorial
COMTOP: Protein Residue–Residue Contact Prediction through Mixed Integer Linear Optimization.
- Published in:
- Membranes, 2021, v. 11, n. 7, p. 503, doi. 10.3390/membranes11070503
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- Article
Reconstruction of Full-Length circRNA Sequences Using Chimeric Alignment Information.
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- International Journal of Molecular Sciences, 2022, v. 23, n. 12, p. 6776, doi. 10.3390/ijms23126776
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- Article
Bioinformatics Screening of Potential Biomarkers from mRNA Expression Profiles to Discover Drug Targets and Agents for Cervical Cancer.
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- International Journal of Molecular Sciences, 2022, v. 23, n. 7, p. 3968, doi. 10.3390/ijms23073968
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- Publication type:
- Article
Identification of Potential Long Non-Coding RNA Candidates that Contribute to Triple-Negative Breast Cancer in Humans through Computational Approach.
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- International Journal of Molecular Sciences, 2021, v. 22, n. 22, p. 12359, doi. 10.3390/ijms222212359
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- Article
Effect of EphA7 Silencing on Proliferation, Invasion and Apoptosis in Human Laryngeal Cancer Cell Lines Hep-2 and AMC-HN-8.
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- Cellular Physiology & Biochemistry (Karger AG), 2015, v. 36, n. 2, p. 435, doi. 10.1159/000430110
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- Article
A Stable Cross‐Linked Binder Network for SnO<sub>2</sub> Anode with Enhanced Sodium‐Ion Storage Performance.
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- ChemistrySelect, 2017, v. 2, n. 35, p. 11365, doi. 10.1002/slct.201702273
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- Publication type:
- Article
miRNA‐192 and ‐215 activate Wnt/β‐catenin signaling pathway in gastric cancer via APC.
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- Journal of Cellular Physiology, 2020, v. 235, n. 9, p. 6218, doi. 10.1002/jcp.29550
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- Publication type:
- Article
Screening and degradation performances of dominant strains in high-salinity landfill leachate.
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- Applied Microbiology & Biotechnology, 2009, v. 84, n. 2, p. 357, doi. 10.1007/s00253-009-2057-x
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- Publication type:
- Article
RabbitV: fast detection of viruses and microorganisms in sequencing data on multi-core architectures.
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- Bioinformatics, 2022, v. 38, n. 10, p. 2932, doi. 10.1093/bioinformatics/btac187
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- Publication type:
- Article
RabbitMash: accelerating hash-based genome analysis on modern multi-core architectures.
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- Bioinformatics, 2021, v. 37, n. 6, p. 873, doi. 10.1093/bioinformatics/btaa754
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- Publication type:
- Article
RabbitQC: high-speed scalable quality control for sequencing data.
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- Bioinformatics, 2021, v. 37, n. 4, p. 573, doi. 10.1093/bioinformatics/btaa719
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- Publication type:
- Article
An Integrated Deep Learning and Molecular Dynamics Simulation-Based Screening Pipeline Identifies Inhibitors of a New Cancer Drug Target TIPE2.
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- Frontiers in Pharmacology, 2021, v. 12, p. 1, doi. 10.3389/fphar.2021.772296
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- Publication type:
- Article
COMSAT: Residue contact prediction of transmembrane proteins based on support vector machines and mixed integer linear programming.
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- Proteins, 2016, v. 84, n. 3, p. 332, doi. 10.1002/prot.24979
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- Publication type:
- Article
A novel protein AXIN1-295aa encoded by circAXIN1 activates the Wnt/β-catenin signaling pathway to promote gastric cancer progression.
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- Molecular Cancer, 2021, v. 20, n. 1, p. 1, doi. 10.1186/s12943-021-01457-w
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- Publication type:
- Article
Electric Vehicle Charging Load Forecasting: A Comparative Study of Deep Learning Approaches.
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- Energies (19961073), 2019, v. 12, n. 14, p. 2692, doi. 10.3390/en12142692
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- Article
Deep Learning Based Drug Screening for Novel Coronavirus 2019-nCov.
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- Interdisciplinary Sciences: Computational Life Sciences, 2020, v. 12, n. 3, p. 368, doi. 10.1007/s12539-020-00376-6
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- Article
Counting Kmers for Biological Sequences at Large Scale.
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- Interdisciplinary Sciences: Computational Life Sciences, 2020, v. 12, n. 1, p. 99, doi. 10.1007/s12539-019-00348-5
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- Publication type:
- Article
SWAP-Assembler: scalable and efficient genome assembly towards thousands of cores.
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- BMC Bioinformatics, 2014, v. 15, p. 1, doi. 10.1186/1471-2105-15-S9-S2
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- Article
A novel hierarchical clustering algorithm for gene sequences.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 174, doi. 10.1186/1471-2105-13-174
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- Publication type:
- Article
SMG-1 inhibition by miR- 192/-215 causes epithelial-mesenchymal transition in gastric carcinogenesis via activation of Wnt signaling.
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- Cancer Medicine, 2018, v. 7, n. 1, p. 146, doi. 10.1002/cam4.1237
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- Publication type:
- Article
SQSTM1/p62 loss reverses the inhibitory effect of sunitinib on autophagy independent of AMPK signaling.
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- Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-47597-4
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- Article
Trends and features of autism spectrum disorder research using artificial intelligence techniques: a bibliometric approach.
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- Current Psychology, 2023, v. 42, n. 35, p. 31317, doi. 10.1007/s12144-022-03977-0
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- Publication type:
- Article
An Infrared Defect Sizing Method Based on Enhanced Phase Images.
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- Sensors (14248220), 2020, v. 20, n. 13, p. 3626, doi. 10.3390/s20133626
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- Article
Interface‐Confined Assembly of Layered Molecular Crystal Arrays Toward Wearable UV‐Radiation Monitor.
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- Advanced Functional Materials, 2024, v. 34, n. 24, p. 1, doi. 10.1002/adfm.202313990
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- Publication type:
- Article
Ensemble Methods with Voting Protocols Exhibit Superior Performance for Predicting Cancer Clinical Endpoints and Providing More Complete Coverage of Disease-Related Genes.
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- International Journal of Genomics, 2018, p. 1, doi. 10.1155/2018/8124950
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- Publication type:
- Article
A new paradigm for applying deep learning to protein–ligand interaction prediction.
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- Briefings in Bioinformatics, 2024, v. 25, n. 3, p. 1, doi. 10.1093/bib/bbae145
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- Publication type:
- Article
JCcirc: circRNA full-length sequence assembly through integrated junction contigs.
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- Briefings in Bioinformatics, 2023, v. 24, n. 6, p. 1, doi. 10.1093/bib/bbad363
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- Publication type:
- Article
A fully differentiable ligand pose optimization framework guided by deep learning and a traditional scoring function.
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- Briefings in Bioinformatics, 2023, v. 24, n. 1, p. 1, doi. 10.1093/bib/bbac520
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- Article
Generating and screening de novo compounds against given targets using ultrafast deep learning models as core components.
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- Briefings in Bioinformatics, 2022, v. 23, n. 4, p. 1, doi. 10.1093/bib/bbac226
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- Article
Improving protein–ligand docking and screening accuracies by incorporating a scoring function correction term.
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- Briefings in Bioinformatics, 2022, v. 23, n. 3, p. 1, doi. 10.1093/bib/bbac051
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- Publication type:
- Article
RabbitTClust: enabling fast clustering analysis of millions of bacteria genomes with MinHash sketches.
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- Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-02961-6
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- Publication type:
- Article
Evaluation of residue-residue contact prediction methods: From retrospective to prospective.
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- PLoS Computational Biology, 2021, v. 17, n. 5, p. 1, doi. 10.1371/journal.pcbi.1009027
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- Publication type:
- Article
A novel virtual screening procedure identifies Pralatrexate as inhibitor of SARS-CoV-2 RdRp and it reduces viral replication in vitro.
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- PLoS Computational Biology, 2020, v. 16, n. 12, p. 1, doi. 10.1371/journal.pcbi.1008489
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- Publication type:
- Article
A novel hybrid water quality forecast model based on real-time data decomposition and error correction.
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- Process Safety & Environmental Protection: Transactions of the Institution of Chemical Engineers Part B, 2022, v. 162, p. 553, doi. 10.1016/j.psep.2022.04.020
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- Article
Study on insulating material characteristics of MgO cable and its ampacity evaluation method.
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- Insulating Materials, 2024, v. 57, n. 6, p. 108, doi. 10.16790/j.cnki.1009-9239.im.2024.06.016
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- Publication type:
- Article
Circ_CEA promotes the interaction between the p53 and cyclin-dependent kinases 1 as a scaffold to inhibit the apoptosis of gastric cancer.
- Published in:
- Cell Death & Disease, 2022, v. 13, n. 9, p. 1, doi. 10.1038/s41419-022-05254-1
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- Publication type:
- Article
Histone methyltransferase SET8 is regulated by miR-192/215 and induces oncogene-induced senescence via p53-dependent DNA damage in human gastric carcinoma cells.
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- Cell Death & Disease, 2020, v. 11, n. 10, p. 1, doi. 10.1038/s41419-020-03130-4
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- Article
The TwistDock workflow for evaluation of bivalent Smac mimetics targeting XIAP.
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- Drug Design, Development & Therapy, 2019, v. 13, p. 1373, doi. 10.2147/dddt.s194276
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- Publication type:
- Article
A Successful Approach of the First Ecological Compensation Demonstration for Crossing Provinces of Downstream and Upstream in China.
- Published in:
- Sustainability (2071-1050), 2020, v. 12, n. 15, p. 6021, doi. 10.3390/su12156021
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- Publication type:
- Article
DeepBindPoc: a deep learning method to rank ligand binding pockets using molecular vector representation.
- Published in:
- PeerJ, 2020, p. 1, doi. 10.7717/peerj.8864
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- Publication type:
- Article
DeepBindRG: a deep learning based method for estimating effective protein–ligand affinity.
- Published in:
- PeerJ, 2019, p. 1, doi. 10.7717/peerj.7362
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- Publication type:
- Article
FcircSEC: An R Package for Full Length circRNA Sequence Extraction and Classification.
- Published in:
- International Journal of Genomics, 2020, p. 1, doi. 10.1155/2020/9084901
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- Article
Editorial: Machine learning for peptide structure, function, and design.
- Published in:
- Frontiers in Genetics, 2022, v. 13, p. 1, doi. 10.3389/fgene.2022.1007635
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- Publication type:
- Article
Evaluation of CircRNA Sequence Assembly Methods Using Long Reads.
- Published in:
- Frontiers in Genetics, 2022, v. 13, p. 1, doi. 10.3389/fgene.2022.816825
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- Publication type:
- Article
Evaluation of CircRNA Sequence Assembly Methods Using Long Reads.
- Published in:
- Frontiers in Genetics, 2022, v. 13, p. 1, doi. 10.3389/fgene.2022.816825
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- Publication type:
- Article
COVID19db: a comprehensive database platform to discover potential drugs and targets of COVID-19 at whole transcriptomic scale.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. D1, p. D747, doi. 10.1093/nar/gkab850
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- Publication type:
- Article
circMine: a comprehensive database to integrate, analyze and visualize human disease–related circRNA transcriptome.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. D1, p. D83, doi. 10.1093/nar/gkab809
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- Article
Systematic study of the boundary composition in Poisson Boltzmann calculations.
- Published in:
- Journal of Computational Chemistry, 2007, v. 28, n. 16, p. 2538, doi. 10.1002/jcc.20698
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- Publication type:
- Article