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Regulating Death and Disease: Exploring the Roles of Metacaspases in Plants and Fungi.
- Published in:
- International Journal of Molecular Sciences, 2023, v. 24, n. 1, p. 312, doi. 10.3390/ijms24010312
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- Article
Regulation of Beclin 1-Mediated Autophagy by Oncogenic Tyrosine Kinases.
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- International Journal of Molecular Sciences, 2020, v. 21, n. 23, p. 9210, doi. 10.3390/ijms21239210
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- Article
Relief of autoinhibition by conformational switch explains enzyme activation by a catalytically dead paralog.
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- eLife, 2016, p. 1, doi. 10.7554/eLife.20198
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- Article
Structure of protein O-mannose kinase reveals a unique active site architecture.
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- eLife, 2016, p. 1, doi. 10.7554/eLife.22238
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- Article
Bile salt receptor complex activates a pathogenic type III secretion system.
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- eLife, 2016, p. 1, doi. 10.7554/eLife.15718
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- Article
Large scale determination of previously unsolved protein structures using evolutionary information.
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- eLife, 2015, p. 1, doi. 10.7554/eLife.09248
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- Article
Erratum: BAP1 loss defines a new class of renal cell carcinoma.
- Published in:
- 2012
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- Publication type:
- Erratum
BAP1 loss defines a new class of renal cell carcinoma.
- Published in:
- Nature Genetics, 2012, v. 44, n. 7, p. 751, doi. 10.1038/ng.2323
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- Article
<i>Vibrio</i> Type III Effector VPA1380 Is Related to the Cysteine Protease Domain of Large Bacterial Toxins.
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- PLoS ONE, 2014, v. 9, n. 8, p. 1, doi. 10.1371/journal.pone.0104387
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- Article
Predictive Sequence Analysis of the Candidatus Liberibacter asiaticus Proteome.
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- PLoS ONE, 2012, v. 7, n. 7, p. 1, doi. 10.1371/journal.pone.0041071
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- Article
Fido, a Novel AMPylation Domain Common to Fic, Doc, and AvrB.
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- PLoS ONE, 2009, v. 4, n. 6, p. 1, doi. 10.1371/journal.pone.0005818
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- Article
A Database of Domain Definitions for Proteins with Complex Interdomain Geometry.
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- PLoS ONE, 2009, v. 4, n. 4, p. 1, doi. 10.1371/journal.pone.0005084
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- Article
Assessment of CASP11 contact-assisted predictions.
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- Proteins, 2016, v. 84, p. 164, doi. 10.1002/prot.25020
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- Article
CASP 11 target classification.
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- Proteins, 2016, v. 84, p. 20, doi. 10.1002/prot.24982
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- Article
Evaluation of free modeling targets in CASP11 and ROLL.
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- Proteins, 2016, v. 84, p. 51, doi. 10.1002/prot.24973
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- Article
The ABC transporters in Candidatus Liberibacter asiaticus.
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- Proteins, 2012, v. 80, n. 11, p. 2614, doi. 10.1002/prot.24147
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- Article
CASP9 target classification.
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- Proteins, 2011, v. 79, p. 21, doi. 10.1002/prot.23190
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- Article
CASP9 assessment of free modeling target predictions.
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- Proteins, 2011, v. 79, p. 59, doi. 10.1002/prot.23181
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- Article
Structure prediction for CASP8 with all-atom refinement using Rosetta.
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- Proteins, 2009, v. 77, n. S9, p. 89, doi. 10.1002/prot.22540
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- Article
Deciphering a novel thioredoxin-like fold family (This article is a US Government work and, as such, is in the public domain in the United States of America.).
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- Proteins, 2003, v. 52, n. 3, p. 323, doi. 10.1002/prot.10425
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- Article
CASP5 target classification.
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- Proteins, 2003, v. 53, n. S6, p. 340, doi. 10.1002/prot.10555
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- Article
CASP5 assessment of fold recognition target predictions.
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- Proteins, 2003, v. 53, n. S6, p. 395, doi. 10.1002/prot.10557
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- Article
Expanding the nitrogen regulatory protein superfamily: Homology detection at below random sequence identity.
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- Proteins, 2002, v. 48, n. 1, p. 75, doi. 10.1002/prot.10110
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- Article
Structure classification of the proteins from Salmonella enterica pangenome revealed novel potential pathogenicity islands.
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- Scientific Reports, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41598-024-60991-x
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- Article
Evolution of a novel lysine decarboxylase in siderophore biosynthesis.
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- Molecular Microbiology, 2012, v. 86, n. 2, p. 485, doi. 10.1111/j.1365-2958.2012.08208.x
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- Article
Analysis of CASP8 targets, predictions and assessment methods.
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- Database: The Journal of Biological Databases & Curation, 2009, v. 2009, p. 1, doi. 10.1093/database/bap003
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- Article
Seq2Ref: a web server to facilitate functional interpretation.
- Published in:
- BMC Bioinformatics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2105-14-30
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- Article
SCOPmap: Automated assignment of protein structures to evolutionary superfamilies.
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- BMC Bioinformatics, 2004, v. 5, p. 197, doi. 10.1186/1471-2105-5-197
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- Article
Genomics Reveals the Origins of Historical Specimens.
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- Molecular Biology & Evolution, 2021, v. 38, n. 5, p. 2166, doi. 10.1093/molbev/msab013
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- Article
ECOD: identification of distant homology among multidomain and transmembrane domain proteins.
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- BMC Molecular & Cell Biology, 2019, p. 1, doi. 10.1186/s12860-019-0204-5
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- Article
Identification of novel restriction endonuclease-like fold families among hypothetical proteins.
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- Nucleic Acids Research, 2005, v. 33, n. 11, p. 3598, doi. 10.1093/nar/gki676
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- Article
Attitudes Toward Corporate Art Collecting: A Survey of Design Professionals.
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- Journal of Interior Design, 1989, v. 15, n. 2, p. 15, doi. 10.1111/j.1939-1668.1989.tb00139.x
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- Article
ECOD: An Evolutionary Classification of Protein Domains.
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- PLoS Computational Biology, 2014, v. 10, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003926
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- Article
Effectors of animal and plant pathogens use a common domain to bind host phosphoinositides.
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- Nature Communications, 2013, v. 4, n. 12, p. 2973, doi. 10.1038/ncomms3973
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- Article
Type VI Secretion System Toxins Horizontally Shared between Marine Bacteria.
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- PLoS Pathogens, 2015, v. 11, n. 8, p. 1, doi. 10.1371/journal.ppat.1005128
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- Article
Structural Basis for Rab1 De-AMPylation by the <i>Legionella pneumophila</i> Effector SidD
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- PLoS Pathogens, 2013, v. 9, n. 5, p. 1, doi. 10.1371/journal.ppat.1003382
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- Article
Mutation severity spectrum of rare alleles in the human genome is predictive of disease type.
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- PLoS Computational Biology, 2020, v. 16, n. 5, p. 1, doi. 10.1371/journal.pcbi.1007775
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- Article
A combined RAD-Seq and WGS approach reveals the genomic basis of yellow color variation in bumble bee Bombus terrestris.
- Published in:
- Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-87194-y
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- Article
GRB2 is a BECN1 interacting protein that regulates autophagy.
- Published in:
- Cell Death & Disease, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41419-023-06387-7
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- Article
Pyrimidine Salvage Enzymes Are Essential for De Novo Biosynthesis of Deoxypyrimidine Nucleotides in Trypanosoma brucei.
- Published in:
- PLoS Pathogens, 2016, v. 12, n. 11, p. 1, doi. 10.1371/journal.ppat.1006010
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- Article
ECOD domain classification of 48 whole proteomes from AlphaFold Structure Database using DPAM2.
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- PLoS Computational Biology, 2024, v. 20, n. 2, p. 1, doi. 10.1371/journal.pcbi.1011586
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- Article
Identification of a candidate therapeutic autophagy-inducing peptide.
- Published in:
- Nature, 2013, v. 494, n. 7436, p. 201, doi. 10.1038/nature11866
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- Article
Prediction of functional specificity determinants from protein sequences using log-likelihood ratios.
- Published in:
- Bioinformatics, 2006, v. 22, n. 2, p. 164, doi. 10.1093/bioinformatics/bti766
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- Article
The human Ago2 MC region does not contain an eIF4E-like mRNA cap binding motif.
- Published in:
- Biology Direct, 2009, v. 4, p. 1, doi. 10.1186/1745-6150-4-2
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- Article
Assessing predictions on fitness effects of missense variants in calmodulin.
- Published in:
- Human Mutation, 2019, v. 40, n. 9, p. 1463, doi. 10.1002/humu.23857
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- Article
Assessing predictions of fitness effects of missense mutations in SUMO-conjugating enzyme UBE2I.
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- Human Mutation, 2017, v. 38, n. 9, p. 1051, doi. 10.1002/humu.23293
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- Article
Tryptophan fuels MYC-dependent liver tumorigenesis through indole 3-pyruvate synthesis.
- Published in:
- Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-47868-3
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- Publication type:
- Article
BOF: a novel family of bacterial OB-fold proteins
- Published in:
- FEBS Letters, 2004, v. 567, n. 2/3, p. 297, doi. 10.1016/j.febslet.2004.04.086
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- Article
Optimization of linear disorder predictors yields tight association between crystallographic disorder and hydrophobicity.
- Published in:
- Protein Science: A Publication of the Protein Society, 2007, v. 16, n. 10, p. 2140, doi. 10.1110/ps.072980107
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- Publication type:
- Article
Longin-like folds identified in CHiPS and DUF254 proteins: Vesicle trafficking complexes conserved in eukaryotic evolution.
- Published in:
- Protein Science: A Publication of the Protein Society, 2006, v. 15, n. 11, p. 2669, doi. 10.1110/ps.062419006
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- Publication type:
- Article