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Comprehensive evaluation of deconvolution methods for human brain gene expression.
Published in:
Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-28655-4
By:
- Sutton, Gavin J.;
- Poppe, Daniel;
- Simmons, Rebecca K.;
- Walsh, Kieran;
- Nawaz, Urwah;
- Lister, Ryan;
- Gagnon-Bartsch, Johann A.;
- Voineagu, Irina
Publication type:
Article
Genome Editing in Neuroepithelial Stem Cells to Generate Human Neurons with High Adenosine‐Releasing Capacity.
Published in:
Stem Cells Translational Medicine, 2018, v. 7, n. 6, p. 477, doi. 10.1002/sctm.16-0272
By:
- Poppe, Daniel;
- Doerr, Jonas;
- Schneider, Marion;
- Wilkens, Ruven;
- Steinbeck, Julius A.;
- Ladewig, Julia;
- Tam, Allison;
- Paschon, David E.;
- Gregory, Philip D.;
- Reik, Andreas;
- Müller, Christa E.;
- Koch, Philipp;
- Brüstle, Oliver
Publication type:
Article
Comprehensive evaluation of deconvolution methods for human brain gene expression.
Published in:
Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-28655-4
By:
- Sutton, Gavin J.;
- Poppe, Daniel;
- Simmons, Rebecca K.;
- Walsh, Kieran;
- Nawaz, Urwah;
- Lister, Ryan;
- Gagnon-Bartsch, Johann A.;
- Voineagu, Irina
Publication type:
Article
Small molecules enable highly efficient neuronal conversion of human fibroblasts.
Published in:
Nature Methods, 2012, v. 9, n. 6, p. 575, doi. 10.1038/nmeth.1972
By:
- Ladewig, Julia;
- Mertens, Jerome;
- Kesavan, Jaideep;
- Doerr, Jonas;
- Poppe, Daniel;
- Glaue, Finnja;
- Herms, Stefan;
- Wernet, Peter;
- Kögler, Gesine;
- Müller, Franz-Josef;
- Koch, Philipp;
- Brüstle, Oliver
Publication type:
Article
Large-scale manipulation of promoter DNA methylation reveals context-specific transcriptional responses and stability.
Published in:
Genome Biology, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s13059-022-02728-5
By:
- de Mendoza, Alex;
- Nguyen, Trung Viet;
- Ford, Ethan;
- Poppe, Daniel;
- Buckberry, Sam;
- Pflueger, Jahnvi;
- Grimmer, Matthew R.;
- Stolzenburg, Sabine;
- Bogdanovic, Ozren;
- Oshlack, Alicia;
- Farnham, Peggy J.;
- Blancafort, Pilar;
- Lister, Ryan
Publication type:
Article
Large-scale manipulation of promoter DNA methylation reveals context-specific transcriptional responses and stability.
Published in:
Genome Biology, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s13059-022-02728-5
By:
- de Mendoza, Alex;
- Nguyen, Trung Viet;
- Ford, Ethan;
- Poppe, Daniel;
- Buckberry, Sam;
- Pflueger, Jahnvi;
- Grimmer, Matthew R.;
- Stolzenburg, Sabine;
- Bogdanovic, Ozren;
- Oshlack, Alicia;
- Farnham, Peggy J.;
- Blancafort, Pilar;
- Lister, Ryan
Publication type:
Article
Excitation-induced ataxin-3 aggregation in neurons from patients with Machado-Joseph disease.
Published in:
Nature, 2011, v. 480, n. 7378, p. 543, doi. 10.1038/nature10671
By:
- Koch, Philipp;
- Breuer, Peter;
- Peitz, Michael;
- Jungverdorben, Johannes;
- Kesavan, Jaideep;
- Poppe, Daniel;
- Doerr, Jonas;
- Ladewig, Julia;
- Mertens, Jerome;
- Tüting, Thomas;
- Hoffmann, Per;
- Klockgether, Thomas;
- Evert, Bernd O.;
- Wüllner, Ullrich;
- Brüstle, Oliver
Publication type:
Article
A modular dCas9-based recruitment platform for combinatorial epigenome editing.
Published in:
Nucleic Acids Research, 2024, v. 52, n. 1, p. 474, doi. 10.1093/nar/gkad1108
By:
- Swain, Tessa;
- Pflueger, Christian;
- Freytag, Saskia;
- Poppe, Daniel;
- Pflueger, Jahnvi;
- Nguyen, Trung Viet;
- Li, Ji Kevin;
- Lister, Ryan
Publication type:
Article
Embryonic Stem Cell-Derived Neurons as a Model System for Epigenome Maturation during Development.
Published in:
Genes, 2023, v. 14, n. 5, p. 957, doi. 10.3390/genes14050957
By:
- Martin, Sally;
- Poppe, Daniel;
- Olova, Nelly;
- O'Leary, Conor;
- Ivanova, Elena;
- Pflueger, Jahnvi;
- Dechka, Jennifer;
- Simmons, Rebecca K.;
- Cooper, Helen M.;
- Reik, Wolf;
- Lister, Ryan;
- Wolvetang, Ernst J.
Publication type:
Article
Systematic assessment of tissue dissociation and storage biases in single-cell and single-nucleus RNA-seq workflows.
Published in:
Genome Biology, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s13059-020-02048-6
By:
- Denisenko, Elena;
- Guo, Belinda B.;
- Jones, Matthew;
- Hou, Rui;
- de Kock, Leanne;
- Lassmann, Timo;
- Poppe, Daniel;
- Clément, Olivier;
- Simmons, Rebecca K.;
- Lister, Ryan;
- Forrest, Alistair R. R.
Publication type:
Article

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