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- Title
Complete Genome Sequences of Xanthomonas axonopodis pv. glycines Isolates from the United States and Thailand Reveal Conserved Transcription Activator-Like Effectors.
- Authors
Carpenter, Sara C D; Kladsuwan, Lawan; Han, Sang-Wook; Prathuangwong, Sutruedee; Bogdanove, Adam J
- Abstract
To compare overall genome structure and transcription activator-like effector content, we completely sequenced Xanthomonas axonopodis pv. glycines strain 12-2, isolated in 1992 in Thailand, and strain EB08, isolated in 2008 in the United States (Iowa) using PacBio technology. We reassembled the genome sequence for a second US strain, 8ra, derived from a 1980 Iowa isolate, from existing PacBio reads. Despite geographic and temporal separation, the three genomes are highly syntenous, and their transcription activator-like effector repertoires are highly conserved.
- Subjects
THAILAND; UNITED States; IOWA; XANTHOMONAS; NUCLEOTIDE sequencing; GLYCINE; COMPARATIVE genomics; PHYTOPATHOGENIC bacteria; XANTHOMONAS campestris
- Publication
Genome Biology & Evolution, 2019, Vol 11, Issue 5, p1380
- ISSN
1759-6653
- Publication type
Article
- DOI
10.1093/gbe/evz085