OpenURL Connection Search

Select item for more details and to access through your institution.

Pan-genome inversion index reveals evolutionary insights into the subpopulation structure of Asian rice.
Published in:
Nature Communications, 2023, p. 1, doi. 10.1038/s41467-023-37004-y
By:
- Zhou, Yong;
- Yu, Zhichao;
- Chebotarov, Dmytro;
- Chougule, Kapeel;
- Lu, Zhenyuan;
- Rivera, Luis F.;
- Kathiresan, Nagarajan;
- Al-Bader, Noor;
- Mohammed, Nahed;
- Alsantely, Aseel;
- Mussurova, Saule;
- Santos, João;
- Thimma, Manjula;
- Troukhan, Maxim;
- Fornasiero, Alice;
- Green, Carl D.;
- Copetti, Dario;
- Kudrna, David;
- Llaca, Victor;
- Lorieux, Mathias
Publication type:
Article
A rare SNP mutation in Brachytic2 moderately reduces plant height and increases yield potential in maize.
Published in:
Journal of Experimental Botany, 2015, v. 66, n. 13, p. 3791, doi. 10.1093/jxb/erv182
By:
- Anqi Xing;
- Yufeng Gao;
- Lingfeng Ye;
- Weiping Zhang;
- Lichun Cai;
- Ching, Ada;
- Llaca, Victor;
- Johnson, Blaine;
- Lin Liu;
- Xiaohong Yang;
- Dingming Kang;
- Jianbing Yan;
- Jiansheng Li
Publication type:
Article
SEQUENCING AND DE NOVO DRAFT ASSEMBLIES OF A FATHEAD MINNOW (PIMEPHALES PROMELAS) REFERENCE GENOME.
Published in:
Environmental Toxicology & Chemistry, 2016, v. 35, n. 1, p. 212, doi. 10.1002/etc.3186
By:
- Burns, Frank R.;
- Cogburn, Amarin L.;
- Ankley, Gerald T.;
- Villeneuve, Daniel L.;
- Waits, Eric;
- Chang, Yun‐Juan;
- Llaca, Victor;
- Deschamps, Stephane D.;
- Jackson, Raymond E.;
- Hoke, Robert Alan
Publication type:
Article
High-quality chromosome scale genome assemblies of two important Sorghum inbred lines, Tx2783 and RTx436.
Published in:
NAR Genomics & Bioinformatics, 2024, v. 6, n. 3, p. 1, doi. 10.1093/nargab/lqae097
By:
- Wang, Bo;
- Chougule, Kapeel;
- Jiao, Yinping;
- Olson, Andrew;
- Kumar, Vivek;
- Gladman, Nicholas;
- Huang, Jian;
- Llaca, Victor;
- Fengler, Kevin;
- Wei, Xuehong;
- Wang, Liya;
- Wang, Xiaofei;
- Regulski, Michael;
- Drenkow, Jorg;
- Gingeras, Thomas;
- Hayes, Chad;
- Armstrong, J Scott;
- Huang, Yinghua;
- Xin, Zhanguo;
- Ware, Doreen
Publication type:
Article
A platinum standard pan-genome resource that represents the population structure of Asian rice.
Published in:
Scientific Data, 2020, v. 7, n. 1, p. 1, doi. 10.1038/s41597-020-0438-2
By:
- Zhou, Yong;
- Chebotarov, Dmytro;
- Kudrna, Dave;
- Llaca, Victor;
- Lee, Seunghee;
- Rajasekar, Shanmugam;
- Mohammed, Nahed;
- Al-Bader, Noor;
- Sobel-Sorenson, Chandler;
- Parakkal, Praveena;
- Arbelaez, Lady Johanna;
- Franco, Natalia;
- Alexandrov, Nickolai;
- Hamilton, N. Ruaraidh Sackville;
- Leung, Hei;
- Mauleon, Ramil;
- Lorieux, Mathias;
- Zuccolo, Andrea;
- McNally, Kenneth;
- Zhang, Jianwei
Publication type:
Article
A giant NLR gene confers broad-spectrum resistance to Phytophthora sojae in soybean.
Published in:
Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-26554-8
By:
- Wang, Weidong;
- Chen, Liyang;
- Fengler, Kevin;
- Bolar, Joy;
- Llaca, Victor;
- Wang, Xutong;
- Clark, Chancelor B.;
- Fleury, Tomara J.;
- Myrvold, Jon;
- Oneal, David;
- van Dyk, Maria Magdalena;
- Hudson, Ashley;
- Munkvold, Jesse;
- Baumgarten, Andy;
- Thompson, Jeff;
- Cai, Guohong;
- Crasta, Oswald;
- Aggarwal, Rajat;
- Ma, Jianxin
Publication type:
Article
A phenylalanine in DGAT is a key determinant of oil content and composition in maize.
Published in:
Nature Genetics, 2008, v. 40, n. 3, p. 367, doi. 10.1038/ng.85
By:
- Peizhong Zheng;
- Allen, William B;
- Roesler, Keith;
- Williams, Mark E;
- Shirong Zhang;
- Jiming Li;
- Glassman, Kimberly;
- Ranch, Jerry;
- Nubel, Douglas;
- Solawetz, William;
- Bhattramakki, Dinakar;
- Llaca, Victor;
- Deschamps, Stéphane;
- Gan-Yuan Zhong;
- Tarczynski, Mitchell C;
- Bo Shen
Publication type:
Article
Characterization, correction and de novo assembly of an Oxford Nanopore genomic dataset from Agrobacterium tumefaciens.
Published in:
Scientific Reports, 2016, p. 28625, doi. 10.1038/srep28625
By:
- Deschamps, Stéphane;
- Mudge, Joann;
- Cameron, Connor;
- Ramaraj, Thiruvarangan;
- Anand, Ajith;
- Fengler, Kevin;
- Hayes, Kevin;
- Llaca, Victor;
- Jones, Todd J.;
- May, Gregory
Publication type:
Article
Near‐gapless genome assemblies of Williams 82 and Lee cultivars for accelerating global soybean research.
Published in:
Plant Genome, 2023, v. 16, n. 4, p. 1, doi. 10.1002/tpg2.20382
By:
- Garg, Vanika;
- Khan, Aamir W.;
- Fengler, Kevin;
- Llaca, Victor;
- Yuan, Yuxuan;
- Vuong, Tri D.;
- Harris, Charlotte;
- Chan, Ting‐Fung;
- Lam, Hon Ming;
- Varshney, Rajeev K.;
- Nguyen, Henry T.
Publication type:
Article
Amplicons of maize zein genes are conserved within genic but expanded and constricted in intergenic regions.
Published in:
Plant Journal, 1998, v. 15, n. 2, p. 211, doi. 10.1046/j.1365-313X.1998.00200.x
By:
- Llaca, Victor;
- Messing, Joachim
Publication type:
Article
Mutation of GATA3 in human breast tumors.
Published in:
Oncogene, 2004, v. 23, n. 46, p. 7669, doi. 10.1038/sj.onc.1207966
By:
- Usary, Jerry;
- Llaca, Victor;
- Karaca, Gamze;
- Presswala, Shafaq;
- Karaca, Mehmet;
- He, Xiaping;
- Langerød, Anita;
- Kåresen, Rolf;
- Oh, Daniel S.;
- Dressler, Lynn G.;
- Lønning, Per E.;
- Strausberg, Robert L.;
- Chanock, Stephen;
- Børresen-Dale, Anne-Lise;
- Perou, Charles M.
Publication type:
Article
A chromosome-scale assembly of the sorghum genome using nanopore sequencing and optical mapping.
Published in:
Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-07271-1
By:
- Deschamps, Stéphane;
- Zhang, Yun;
- Llaca, Victor;
- Ye, Liang;
- Sanyal, Abhijit;
- King, Matthew;
- May, Gregory;
- Lin, Haining
Publication type:
Article
Maize Glutaredoxin Gene, Abphyl2, Regulates Shoot Meristem Size and Phyllotaxy.
Published in:
Plant Cell, 2015, v. 27, n. 1, p. 121, doi. 10.1105/tpc.114.130393
By:
- Yang, Fang;
- Bui, Huyen Thanh;
- Pautler, Michael;
- Llaca, Victor;
- Johnston, Robyn;
- Lee, Byeong-ha;
- Kolbe, Allison;
- Sakai, Hajime;
- Jackson, David
Publication type:
Article
A happy accident: a novel turfgrass reference genome.
Published in:
G3: Genes | Genomes | Genetics, 2023, v. 13, n. 6, p. 1, doi. 10.1093/g3journal/jkad073
By:
- Phillips, Alyssa R.;
- Seetharam, Arun S.;
- Albert, Patrice S.;
- AuBuchon-Elder, Taylor;
- Birchler, James A.;
- Buckler, Edward S.;
- Gillespie, Lynn J.;
- Hufford, Matthew B.;
- Llaca, Victor;
- Romay, Maria Cinta;
- Soreng, Robert J.;
- Kellogg, Elizabeth A.;
- Ross-Ibarra, Jeffrey
Publication type:
Article
The gyrfalcon (Falco rusticolus) genome.
Published in:
G3: Genes | Genomes | Genetics, 2023, v. 13, n. 3, p. 1, doi. 10.1093/g3journal/jkad001
By:
- Zuccolo, Andrea;
- Mfarrej, Sara;
- Celii, Mirko;
- Mussurova, Saule;
- Rivera, Luis F.;
- Llaca, Victor;
- Mohammed, Nahed;
- Pain, Arnab;
- Alrefaei, Abdulmajeed Fahad;
- Alrefaei, Abdulwahed Fahad;
- Wing, Rod A.
Publication type:
Article
The Beginning of the End: A Chromosomal Assembly of the New World Malaria Mosquito Ends with a Novel Telomere.
Published in:
G3: Genes | Genomes | Genetics, 2020, v. 10, n. 10, p. 3811, doi. 10.1534/g3.120.401654
By:
- Compton, Austin;
- Jiangtao Liang;
- Chujia Chen;
- Lukyanchikova, Varvara;
- Yumin Qi;
- Potters, Mark;
- Settlage, Robert;
- Miller, Dustin;
- Deschamps, Stéphane;
- Chunhong Mao;
- Llaca, Victor;
- Sharakhov, Igor V.;
- Zhijian Tu
Publication type:
Article
tassel-less1 Encodes a Boron Channel Protein Required for Inflorescence Development in Maize.
Published in:
Plant & Cell Physiology, 2014, v. 55, n. 6, p. 1044, doi. 10.1093/pcp/pcu036
By:
- Leonard, April;
- Holloway, Beth;
- Guo, Mei;
- Rupe, Mary;
- Yu, GongXin;
- Beatty, Mary;
- Zastrow-Hayes, Gina;
- Meeley, Robert;
- Llaca, Victor;
- Butler, Karlene;
- Stefani, Tony;
- Jaqueth, Jennifer;
- Li, Bailin
Publication type:
Article
Selected DNA repair polymorphisms and gastric cancer in Poland.
Published in:
Carcinogenesis, 2005, v. 26, n. 8, p. 1354, doi. 10.1093/carcin/bgi084
By:
- Wen-Yi Huang;
- Wong-Ho Chow;
- Nat Rothman;
- Jolanta Lissowska;
- Victor Llaca;
- Meredith Yeager;
- Witold Zatonski;
- Richard B. Hayes
Publication type:
Article
Genotyping-by-Sequencing in Plants.
Published in:
Biology (2079-7737), 2012, v. 1, n. 3, p. 460, doi. 10.3390/biology1030460
By:
- Deschamps, Stéphane;
- Llaca, Victor;
- May, Gregory D.
Publication type:
Article
ZmWAK02 encoding an RD‐WAK protein confers maize resistance against gray leaf spot.
Published in:
New Phytologist, 2024, v. 241, n. 4, p. 1780, doi. 10.1111/nph.19465
By:
- Dai, Zhikang;
- Pi, Qianyu;
- Liu, Yutong;
- Hu, Long;
- Li, Bingchen;
- Zhang, Bao;
- Wang, Yanbo;
- Jiang, Min;
- Qi, Xin;
- Li, Wenqiang;
- Gui, Songtao;
- Llaca, Victor;
- Fengler, Kevin;
- Thatcher, Shawn;
- Li, Ziwei;
- Liu, Xiangguo;
- Fan, Xingming;
- Lai, Zhibing
Publication type:
Article
Loss of pod strings in common bean is associated with gene duplication, retrotransposon insertion and overexpression of PvIND.
Published in:
New Phytologist, 2022, v. 235, n. 6, p. 2454, doi. 10.1111/nph.18319
By:
- Parker, Travis A.;
- Cetz, Jose;
- de Sousa, Lorenna Lopes;
- Kuzay, Saarah;
- Lo, Sassoum;
- Floriani, Talissa de Oliveira;
- Njau, Serah;
- Arunga, Esther;
- Duitama, Jorge;
- Jernstedt, Judy;
- Myers, James R.;
- Llaca, Victor;
- Herrera‐Estrella, Alfredo;
- Gepts, Paul
Publication type:
Article
New insights into immune genes and other expanded gene families of the house fly, Musca domestica, from an improved whole genome sequence.
Published in:
Archives of Insect Biochemistry & Physiology, 2023, v. 114, n. 3, p. 1, doi. 10.1002/arch.22049
By:
- Meisel, Richard P.;
- Freeman, Jamie C.;
- Asgari, Danial;
- Llaca, Victor;
- Fengler, Kevin A.;
- Mann, David;
- Rastogi, Achal;
- Loso, Mike;
- Geng, Chaoxian;
- Scott, Jeffrey G.
Publication type:
Article
Pushing the limits of HiFi assemblies reveals centromere diversity between two Arabidopsis thaliana genomes.
Published in:
Nucleic Acids Research, 2022, v. 50, n. 21, p. 12309, doi. 10.1093/nar/gkac1115
By:
- Rabanal, Fernando A;
- Gräff, Maike;
- Lanz, Christa;
- Fritschi, Katrin;
- Llaca, Victor;
- Lang, Michelle;
- Carbonell-Bejerano, Pablo;
- Henderson, Ian;
- Weigel, Detlef
Publication type:
Article
Improved pearl millet genomes representing the global heterotic pool offer a framework for molecular breeding applications.
Published in:
Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05258-3
By:
- Ramu, Punna;
- Srivastava, Rakesh K.;
- Sanyal, Abhijit;
- Fengler, Kevin;
- Cao, Jun;
- Zhang, Yun;
- Nimkar, Mitali;
- Gerke, Justin;
- Shreedharan, Sriram;
- Llaca, Victor;
- May, Gregory;
- Peterson-Burch, Brooke;
- Lin, Haining;
- King, Matthew;
- Das, Sayan;
- Bhupesh, Vaid;
- Mandaokar, Ajin;
- Maruthachalam, Karunakaran;
- Krishnamurthy, Pobbathi;
- Gandhi, Harish
Publication type:
Article
Gapless assembly of maize chromosomes using long-read technologies.
Published in:
Genome Biology, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s13059-020-02029-9
By:
- Liu, Jianing;
- Seetharam, Arun S.;
- Chougule, Kapeel;
- Ou, Shujun;
- Swentowsky, Kyle W.;
- Gent, Jonathan I.;
- Llaca, Victor;
- Woodhouse, Margaret R.;
- Manchanda, Nancy;
- Presting, Gernot G.;
- Kudrna, David A.;
- Alabady, Magdy;
- Hirsch, Candice N.;
- Fengler, Kevin A.;
- Ware, Doreen;
- Michael, Todd P.;
- Hufford, Matthew B.;
- Dawe, R. Kelly
Publication type:
Article
The NLRomes of Zea mays NAM founder lines and Zea luxurians display presence–absence variation, integrated domain diversity, and mobility.
Published in:
Molecular Plant Pathology, 2023, v. 24, n. 7, p. 742, doi. 10.1111/mpp.13319
By:
- Thatcher, Shawn;
- Jung, Mark;
- Panangipalli, Gayathri;
- Fengler, Kevin;
- Sanyal, Abhijit;
- Li, Bailin;
- Llaca, Victor;
- Habben, Jeffrey
Publication type:
Article
The northern corn leaf blight resistance gene Ht1 encodes an nucleotide‐binding, leucine‐rich repeat immune receptor.
Published in:
Molecular Plant Pathology, 2023, v. 24, n. 7, p. 758, doi. 10.1111/mpp.13267
By:
- Thatcher, Shawn;
- Leonard, April;
- Lauer, Marianna;
- Panangipalli, Gayathri;
- Norman, Bret;
- Hou, Zhenglin;
- Llaca, Victor;
- Hu, Wang‐Nan;
- Qi, Xiuli;
- Jaqueth, Jennifer;
- Severns, Dina;
- Whitaker, David;
- Wilson, Bill;
- Tabor, Girma;
- Li, Bailin
Publication type:
Article
Effect of sequence depth and length in long-read assembly of the maize inbred NC358.
Published in:
Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-16037-7
By:
- Ou, Shujun;
- Liu, Jianing;
- Chougule, Kapeel M.;
- Fungtammasan, Arkarachai;
- Seetharam, Arun S.;
- Stein, Joshua C.;
- Llaca, Victor;
- Manchanda, Nancy;
- Gilbert, Amanda M.;
- Wei, Sharon;
- Chin, Chen-Shan;
- Hufnagel, David E.;
- Pedersen, Sarah;
- Snodgrass, Samantha J.;
- Fengler, Kevin;
- Woodhouse, Margaret;
- Walenz, Brian P.;
- Koren, Sergey;
- Phillippy, Adam M.;
- Hannigan, Brett T.
Publication type:
Article

Found: 28