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Insights into the cotranscriptional and translational control mechanisms of the Escherichia coli tbpA thiamin pyrophosphate riboswitch.
- Published in:
- Communications Biology, 2024, v. 7, n. 1, p. 1, doi. 10.1038/s42003-024-07008-5
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- Publication type:
- Article
Insights into the cotranscriptional and translational control mechanisms of the Escherichia coli tbpA thiamin pyrophosphate riboswitch.
- Published in:
- Communications Biology, 2024, v. 7, n. 1, p. 1, doi. 10.1038/s42003-024-07008-5
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- Article
Riboswitch Mechanisms for Regulation of P1 Helix Stability.
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- International Journal of Molecular Sciences, 2024, v. 25, n. 19, p. 10682, doi. 10.3390/ijms251910682
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- Article
Opportunities for Riboswitch Inhibition by Targeting Co-Transcriptional RNA Folding Events.
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- International Journal of Molecular Sciences, 2024, v. 25, n. 19, p. 10495, doi. 10.3390/ijms251910495
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- Article
Recent Advances in RNA Interference-Based Therapy for Hepatocellular Carcinoma: Emphasis on siRNA.
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- Cell Biochemistry & Biophysics, 2024, v. 82, n. 3, p. 1947, doi. 10.1007/s12013-024-01395-6
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- Article
Carba‐Sugar Analogs of Glucosamine‐6‐Phosphate: New Activators for the glmS Riboswitch.
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- Chemistry - A European Journal, 2023, v. 29, n. 3, p. 1, doi. 10.1002/chem.202202378
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- Article
Exploring l-isoleucine riboswitches for enhancing 4-hydroxyisoleucine production in Corynebacterium glutamicum.
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- Biotechnology Letters, 2023, v. 45, n. 9, p. 1169, doi. 10.1007/s10529-023-03407-6
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- Article
Theophylline-inducible riboswitch accurately regulates protein expression at low level in Escherichia coli.
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- Biotechnology Letters, 2019, v. 41, n. 6/7, p. 743, doi. 10.1007/s10529-019-02672-8
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- Article
Down-regulated expression of IKZF1 mRNA in peripheral blood mononuclear cells from patients with systemic lupus erythematosus.
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- Rheumatology International, 2011, v. 31, n. 6, p. 819, doi. 10.1007/s00296-010-1576-1
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- Article
Fluorescent riboswitch-controlled biosensors for the genome scale analysis of metabolic pathways.
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- Scientific Reports, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41598-024-61980-w
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- Article
Aptamers, Riboswitches, and Ribozymes in S. cerevisiae Synthetic Biology.
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- Life (2075-1729), 2021, v. 11, n. 3, p. 248, doi. 10.3390/life11030248
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- Article
Non-Conserved Residues in Clostridium acetobutylicum tRNA<sup>Ala</sup> Contribute to tRNA Tuning for Efficient Antitermination of the alaS T Box Riboswitch.
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- Life (2075-1729), 2015, v. 5, n. 4, p. 1567, doi. 10.3390/life5041567
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- Article
Alternatives to conventional antimicrobial drugs: a review of future prospects.
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- Veterinary Dermatology, 2012, v. 23, n. 4, p. 299, doi. 10.1111/j.1365-3164.2012.01042.x
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- Publication type:
- Article
Classification of seed members of five riboswitch families as short sequences based on the features extracted by Block Location-Based Feature Extraction (BLBFE) method.
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- BioImpacts, 2021, v. 11, n. 2, p. 101, doi. 10.34172/bi.2021.17
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- Article
Development of a new sequential block finding strategy for detection of conserved sequences in riboswitches.
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- BioImpacts, 2018, v. 8, n. 1, p. 13, doi. 10.15171/bi.2018.03
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- Article
A new entropy model for RNA: part III, Is the folding free energy landscape of RNA funnel shaped?
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- Journal of Nucleic Acids Investigation, 2013, v. 4, n. 1, p. 1, doi. 10.4081/jnai.2013.2651
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- Article
Comparative genomics and phylogenomic analyses of lysine riboswitch distributions in bacteria.
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- PLoS ONE, 2017, v. 12, n. 9, p. 1, doi. 10.1371/journal.pone.0184314
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- Article
Ligand-mediated and tertiary interactions cooperatively stabilize the P1 region in the guanine-sensing riboswitch.
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- PLoS ONE, 2017, v. 12, n. 6, p. 1, doi. 10.1371/journal.pone.0179271
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- Article
Spotlights on our sister journals: Eur. J. Org. Chem. 22/2014.
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- European Journal of Organic Chemistry, 2014, v. 2014, n. 22, p. 4684, doi. 10.1002/ejoc.201490061
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- Article
SAM-II Riboswitch Samples at least Two Conformations in Solution in the Absence of Ligand: Implications for Recognition.
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- Angewandte Chemie International Edition, 2016, v. 55, n. 8, p. 2724, doi. 10.1002/anie.201509997
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- Article
Design of Artificial Riboswitches as Biosensors.
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- Sensors (14248220), 2017, v. 17, n. 9, p. 1990, doi. 10.3390/s17091990
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- Article
How reliable is the linear noise approximation of gene regulatory networks?
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- BMC Genomics, 2013, v. 14, n. Suppl 4, p. 1, doi. 10.1186/1471-2164-14-S4-S5
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- Article
Comparative genomics of metabolic capacities of regulons controlled by cis-regulatory RNA motifs in bacteria.
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- BMC Genomics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2164-14-597
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- Article
Identification, variation and transcription of pneumococcal repeat sequences.
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- BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-120
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- Article
De novo synthesis and assembly of multiplex riboswitches in vitro.
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- Biotechnology Progress, 2009, v. 25, n. 5, p. 1228, doi. 10.1002/btpr.224
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- Article
Switchable Fluorescent Light‐Up Aptamers Based on Riboswitch Architectures.
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- Angewandte Chemie, 2023, v. 135, n. 41, p. 1, doi. 10.1002/ange.202302858
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- Article
Comprehensive characterization of a theophylline riboswitch reveals two pivotal features of Shine-Dalgarno influencing activated translation property.
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- Applied Microbiology & Biotechnology, 2017, v. 101, n. 5, p. 2107, doi. 10.1007/s00253-016-7988-4
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- Article
Enhancing the vitamin B12 production and growth of Propionibacterium freudenreichii in tofu wastewater via a light-induced vitamin B12 riboswitch.
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- Applied Microbiology & Biotechnology, 2015, v. 99, n. 24, p. 10481, doi. 10.1007/s00253-015-6958-6
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- Article
Small RNA regulators in bacteria: powerful tools for metabolic engineering and synthetic biology.
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- Applied Microbiology & Biotechnology, 2014, v. 98, n. 8, p. 3413, doi. 10.1007/s00253-014-5569-y
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- Article
Selective small-molecule inhibition of an RNA structural element.
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- Nature, 2015, v. 526, n. 7575, p. 672, doi. 10.1038/nature15542
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- Article
Understanding the transcriptome through RNA structure.
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- 2011
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- Publication type:
- journal article
Riboswitch-mediated Attenuation of Transgene Cytotoxicity Increases Adeno-associated Virus Vector Yields in HEK-293 Cells.
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- Molecular Therapy, 2015, v. 23, n. 10, p. 1582, doi. 10.1038/mt.2015.123
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- Article
Evaluation of miR-101 Level in Patients with Chronic Hepatitis B Virus Infection and Liver Cirrhosis.
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- Medical Laboratory Journal, 2017, v. 11, n. 3, p. 10, doi. 10.18869/acadpub.mlj.11.3.10
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- Article
Allosteric mechanism of the V. vulnificus adenine riboswitch resolved by four-dimensional chemical mapping.
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- eLife, 2018, p. 1, doi. 10.7554/eLife.29602
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- Article
Pausing guides RNA folding to populate transiently stable RNA structures for riboswitch-based transcription regulation.
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- eLife, 2017, p. 1, doi. 10.7554/eLife.21297
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- Article
Rational design of aptazyme riboswitches for efficient control of gene expression in mammalian cells.
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- eLife, 2016, p. 1, doi. 10.7554/eLife.18858
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- Article
The light side of the force.
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- eLife, 2016, p. 1, doi. 10.7554/eLife.14274
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- Article
Observation of long-range tertiary interactions during ligand binding by the TPP riboswitch aptamer.
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- eLife, 2015, p. 1, doi. 10.7554/eLife.12362
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- Article
Real-Time Assessment of Intracellular Metabolites in Single Cells through RNA-Based Sensors.
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- Biomolecules (2218-273X), 2023, v. 13, n. 5, p. 765, doi. 10.3390/biom13050765
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- Article
Trying on tRNA for Size: RNase P and the T-box Riboswitch as Molecular Rulers.
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- Biomolecules (2218-273X), 2016, v. 6, n. 2, p. 18, doi. 10.3390/biom6020018
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- Article
Using RNA Sequence and Structure for the Prediction of Riboswitch Aptamer: A Comprehensive Review of Available Software and Tools.
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- Frontiers in Genetics, 2018, p. 1, doi. 10.3389/fgene.2017.00231
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- Article
A CRISPR/Cas9-riboswitch-Based Method for Downregulation of Gene Expression in Trypanosoma cruzi.
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- Frontiers in Cellular & Infection Microbiology, 2020, p. 1, doi. 10.3389/fcimb.2020.00068
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- Article
A fluoride-responsive genetic circuit enables in vivo biofluorination in engineered Pseudomonas putida.
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- Nature Communications, 2020, v. 11, n. 1, p. N.PAG, doi. 10.1038/s41467-020-18813-x
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- Publication type:
- Article
Real-time monitoring of single ZTP riboswitches reveals a complex and kinetically controlled decision landscape.
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- Nature Communications, 2020, v. 11, n. 1, p. N.PAG, doi. 10.1038/s41467-020-18283-1
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- Article
A SAM-I riboswitch with the ability to sense and respond to uncharged initiator tRNA.
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- Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-16417-z
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- Article
A riboswitch gives rise to multi-generational phenotypic heterogeneity in an auxotrophic bacterium.
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- Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-15017-1
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- Article
High-throughput identification of synthetic riboswitches by barcode-free amplicon-sequencing in human cells.
- Published in:
- Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-14491-x
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- Article
SAM-VI riboswitch structure and signature for ligand discrimination.
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- Nature Communications, 2019, v. 10, n. 1, p. 1, doi. 10.1038/s41467-019-13600-9
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- Article
Cryo-EM structure of a 40 kDa SAM-IV riboswitch RNA at 3.7 Å resolution.
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- Nature Communications, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41467-019-13494-7
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- Article
Polymerase chain reaction: A molecular diagnostic tool in periodontology.
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- Journal of Indian Society of Periodontology, 2016, v. 20, n. 2, p. 128, doi. 10.4103/0972-124X.176391
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- Article