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- Title
BODIL: a molecular modeling environment for structure-function analysis and drug design.
- Authors
Lehtonen, Jukka; Still, Dan-Johan; Rantanen, Ville-v.; Ekholm, Jan; Björklund, Dag; Iftikhar, Zuhair; Huhtala, Mikko; Repo, Susanna; Jussila, Antti; Jaakkola, Jussi; Pentikäinen, Olli; Nyrönen, Tommi; Salminen, Tiina; Gyllenberg, Mats; Johnson, Mark
- Abstract
BODIL is a molecular modeling environment geared to help the user to quickly identify key features of proteins critical to molecular recognition, especially (1) in drug discovery applications, and (2) to understand the structural basis for function. The program incorporates state-of-the-art graphics, sequence and structural alignment methods, among other capabilities needed in modern structure-function-drug target research. BODIL has a flexible design that allows on-the-fly incorporation of new modules, has intelligent memory management, and fast multi-view graphics. A beta version of BODIL and an accompanying tutorial are available at http://www.abo.fi/fak/mnf/bkf/research/johnson/bodil.html
- Subjects
MOLECULAR models; DRUG design; PROTEINS; GRAPHIC arts; COMPUTER memory management; MOLECULAR biology
- Publication
Journal of Computer-Aided Molecular Design, 2004, Vol 18, Issue 6, p401
- ISSN
0920-654X
- Publication type
Article
- DOI
10.1007/s10822-004-3752-4