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- Title
Whole-genome sequence and annotation of Penstemon davidsonii.
- Authors
Ostevik, Kate L; Alabady, Magdy; Zhang, Mengrui; Rausher, Mark D
- Abstract
Penstemon is the most speciose flowering plant genus endemic to North America. Penstemon species' diverse morphology and adaptation to various environments have made them a valuable model system for studying evolution. Here, we report the first full reference genome assembly and annotation for Penstemon davidsonii. Using PacBio long-read sequencing and Hi-C scaffolding technology, we constructed a de novo reference genome of 437,568,744 bases, with a contig N50 of 40 Mb and L50 of 5. The annotation includes 18,199 gene models, and both the genome and transcriptome assembly contain over 95% complete eudicot BUSCOs. This genome assembly will serve as a valuable reference for studying the evolutionary history and genetic diversity of the Penstemon genus.
- Subjects
NORTH America; WHOLE genome sequencing; FLOWERING of plants; GENETIC variation; ANNOTATIONS; ANGIOSPERMS; NUCLEOTIDE sequencing
- Publication
G3: Genes | Genomes | Genetics, 2024, Vol 14, Issue 3, p1
- ISSN
2160-1836
- Publication type
Article
- DOI
10.1093/g3journal/jkad296