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Structural variants and short tandem repeats impact gene expression and splicing in bovine testis tissue.
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- Genetics, 2023, v. 225, n. 3, p. 1, doi. 10.1093/genetics/iyad161
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- Article
Infertility due to defective sperm flagella caused by an intronic deletion in DNAH17 that perturbs splicing.
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- Genetics, 2021, v. 217, n. 2, p. 1, doi. 10.1093/genetics/iyaa033
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- Article
Usefulness of Multiparental Populations of Maize (Zea mays L.) for Genome-Based Prediction.
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- Genetics, 2014, v. 198, n. 1, p. 3, doi. 10.1534/genetics.114.161943
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- Article
Allelic Expression Imbalance Analysis Identified YAP1 Amplification in p53- Dependent Osteosarcoma.
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- Cancers, 2021, v. 13, n. 6, p. 1364, doi. 10.3390/cancers13061364
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- Article
Comparison among three variant callers and assessment of the accuracy of imputation from SNP array data to whole-genome sequence level in chicken.
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- BMC Genomics, 2015, v. 16, p. 1, doi. 10.1186/s12864-015-2059-2
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- Article
Homozygous haplotype deficiency reveals deleterious mutations compromising reproductive and rearing success in cattle.
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- BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-015-1483-7
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- Article
In frame exon skipping in UBE3B is associated with developmental disorders and increased mortality in cattle.
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- BMC Genomics, 2014, v. 15, n. 1, p. 890, doi. 10.1186/1471-2164-15-890
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- Article
A powerful tool for genome analysis in maize: development and evaluation of the high density 600 k SNP genotyping array.
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- BMC Genomics, 2014, v. 15, n. 1, p. 823, doi. 10.1186/1471-2164-15-823
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- Article
A nonsense mutation in PLD4 is associated with a zinc deficiency-like syndrome in Fleckvieh cattle
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- BMC Genomics, 2014, v. 15, n. 1, p. 623, doi. 10.1186/1471-2164-15-623
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- Article
Assessment of the genomic variation in a cattle population by re-sequencing of key animals at low to medium coverage.
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- BMC Genomics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2164-14-446
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- Article
Genome-Wide Association Study Identifies Two Major Loci Affecting Calving Ease and Growth-Related Traits in Cattle.
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- Genetics, 2011, v. 187, n. 1, p. 289, doi. 10.1534/genetics.110.124057
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- Article
Exploiting public databases of genomic variation to quantify evolutionary constraint on the branch point sequence in 30 plant and animal species.
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- Nucleic Acids Research, 2023, v. 52, n. 22, p. 12069, doi. 10.1093/nar/gkad970
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- Article
Multi-trait meta-analyses reveal 25 quantitative trait loci for economically important traits in Brown Swiss cattle.
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- BMC Genomics, 2019, v. 20, n. 1, p. N.PAG, doi. 10.1186/s12864-019-6066-6
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- Article
Structural variant-based pangenome construction has low sensitivity to variability of haplotype-resolved bovine assemblies.
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- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-30680-2
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- Article
A comprehensive study of the genomic differentiation between temperate Dent and Flint maize.
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- Genome Biology, 2016, v. 17, p. 1, doi. 10.1186/s13059-016-1009-x
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- Article
A nonsense mutation of bone morphogenetic protein-15 (BMP15) causes both infertility and increased litter size in pigs.
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- BMC Genomics, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s12864-020-07343-x
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- Article
Investigating the accuracy of imputing autosomal variants in Nellore cattle using the ARS-UCD1.2 assembly of the bovine genome.
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- BMC Genomics, 2020, v. 21, n. 1, p. N.PAG, doi. 10.1186/s12864-020-07184-8
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- Article
Assessing genomic diversity and signatures of selection in Original Braunvieh cattle using whole-genome sequencing data.
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- BMC Genomics, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s12864-020-6446-y
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- Article
Bovine breed-specific augmented reference graphs facilitate accurate sequence read mapping and unbiased variant discovery.
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- Genome Biology, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s13059-020-02105-0
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- Article
Classic Selective Sweeps Revealed by Massive Sequencing in Cattle.
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- PLoS Genetics, 2014, v. 10, n. 2, p. 1, doi. 10.1371/journal.pgen.1004148
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- Article
A Nonsense Mutation in <i>TMEM95</i> Encoding a Nondescript Transmembrane Protein Causes Idiopathic Male Subfertility in Cattle.
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- PLoS Genetics, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pgen.1004044
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- Article
Evaluation of the accuracy of imputed sequence variant genotypes and their utility for causal variant detection in cattle.
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- Genetics Selection Evolution, 2017, v. 49, p. 1, doi. 10.1186/s12711-017-0301-x
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- Article
A frameshift mutation in GON4L is associated with proportionate dwarfism in Fleckvieh cattle.
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- Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0207-z
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- Article
Confirmation of a non-synonymous SNP in PNPLA8 as a candidate causal mutation for Weaver syndrome in Brown Swiss cattle.
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- Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0201-5
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- Article
A multi-trait meta-analysis with imputed sequence variants reveals twelve QTL for mammary gland morphology in Fleckvieh cattle.
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- Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0190-4
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- Article
Imputation of high-density genotypes in the Fleckvieh cattle population.
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- Genetics Selection Evolution, 2013, v. 45, n. 2, p. 1, doi. 10.1186/1297-9686-45-3
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- Article
Use of SNP genotypes to identify carriers of harmful recessive mutations in cattle populations.
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- BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-3218-9
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- Article
A missense mutation in TUBD1 is associated with high juvenile mortality in Braunvieh and Fleckvieh cattle.
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- BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-2742-y
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- Article
Ectopic <i>KIT</i> Copy Number Variation Underlies Impaired Migration of Primordial Germ Cells Associated with Gonadal Hypoplasia in Cattle (<i>Bos taurus</i>).
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- PLoS ONE, 2013, v. 8, n. 9, p. 1, doi. 10.1371/journal.pone.0075659
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- Article
Identification and Dissection of Four Major QTL Affecting Milk Fat Content in the German Holstein-Friesian Population.
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- PLoS ONE, 2012, v. 7, n. 7, p. 1, doi. 10.1371/journal.pone.0040711
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- Article
Identification of QTL for UV-Protective Eye Area Pigmentation in Cattle by Progeny Phenotyping and Genome-Wide Association Analysis.
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- PLoS ONE, 2012, v. 7, n. 5, p. 1, doi. 10.1371/journal.pone.0036346
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- Article
RNA-DNA differences in variant calls from cattle tissues result in erroneous eQTLs.
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- BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10645-z
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- Article
Highly accurate sequence imputation enables precise QTL mapping in Brown Swiss cattle.
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- BMC Genomics, 2017, v. 18, p. 1, doi. 10.1186/s12864-017-4390-2
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- Article
Meta-analysis of sequence-based association studies across three cattle breeds reveals 25 QTL for fat and protein percentages in milk at nucleotide resolution.
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- BMC Genomics, 2017, v. 18, p. 1, doi. 10.1186/s12864-017-4263-8
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- Article
A 1-bp deletion in bovine QRICH2 causes low sperm count and immotile sperm with multiple morphological abnormalities.
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- Genetics Selection Evolution, 2022, v. 54, n. 1, p. 1, doi. 10.1186/s12711-022-00710-0
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- Article
Meta-analysis for milk fat and protein percentage using imputed sequence variant genotypes in 94,321 cattle from eight cattle breeds.
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- Genetics Selection Evolution, 2020, v. 52, n. 1, p. 1, doi. 10.1186/s12711-020-00556-4
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- Article
Accurate sequence variant genotyping in cattle using variation-aware genome graphs.
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- Genetics Selection Evolution, 2019, v. 51, n. 1, p. N.PAG, doi. 10.1186/s12711-019-0462-x
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- Article
Population Networks Associated with Runs of Homozygosity Reveal New Insights into the Breeding History of the Haflinger Horse.
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- Journal of Heredity, 2018, v. 109, n. 4, p. 384, doi. 10.1093/jhered/esx114
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- Article
Molecular quantitative trait loci in reproductive tissues impact male fertility in cattle.
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- Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-44935-7
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- Publication type:
- Article
Whole-genome sequencing of 234 bulls facilitates mapping of monogenic and complex traits in cattle.
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- Nature Genetics, 2014, v. 46, n. 8, p. 858, doi. 10.1038/ng.3034
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- Article
Activation of cryptic splicing in bovine WDR19 is associated with reduced semen quality and male fertility.
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- PLoS Genetics, 2020, v. 16, n. 5, p. 1, doi. 10.1371/journal.pgen.1008804
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- Article
Meta-analysis of six dairy cattle breeds reveals biologically relevant candidate genes for mastitis resistance.
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- Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00920-8
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- Article
Correction: Sequence-based GWAS meta-analyses for beef production traits.
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- 2023
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- Correction Notice
Sequence-based GWAS meta-analyses for beef production traits.
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- Genetics Selection Evolution, 2023, v. 55, n. 1, p. 1, doi. 10.1186/s12711-023-00848-5
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- Publication type:
- Article
The size and composition of haplotype reference panels impact the accuracy of imputation from low-pass sequencing in cattle.
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- Genetics Selection Evolution, 2023, v. 55, n. 1, p. 1, doi. 10.1186/s12711-023-00809-y
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- Article
The intronic branch point sequence is under strong evolutionary constraint in the bovine and human genome.
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- Communications Biology, 2021, v. 4, n. 1, p. 1, doi. 10.1038/s42003-021-02725-7
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- Article
The effect of mislabeled phenotypic status on the identification of mutation-carriers from SNP genotypes in dairy cattle.
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- BMC Research Notes, 2017, v. 10, p. 1, doi. 10.1186/s13104-017-2540-x
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- Article
A nonsense mutation in the COL7A1 gene causes epidermolysis bullosa in Vorderwald cattle.
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- BMC Genetics, 2016, v. 17, p. 1, doi. 10.1186/s12863-016-0458-2
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- Article
A frameshift mutation in ARMC3 is associated with a tail stump sperm defect in Swedish Red (Bos taurus) cattle.
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- BMC Genetics, 2016, v. 17, p. 1, doi. 10.1186/s12863-016-0356-7
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- Article
Developmental progression continues during embryonic diapause in the roe deer.
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- Communications Biology, 2024, v. 7, n. 1, p. 1, doi. 10.1038/s42003-024-05944-w
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- Article